RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
ACTN1-203ENST00000394419 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
ACTN1-203ENST00000394419 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
ACTN1-203ENST00000394419 EPRSP07814 1512 aaKnown RBP14.35□□□□□ -0.11
ACTN1-203ENST00000394419 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
ACTN1-203ENST00000394419 MYT1LQ9UL68 1186 aa14.33□□□□□ -0.12
ACTN1-203ENST00000394419 KIF7Q2M1P5 1343 aa14.33□□□□□ -0.12
ACTN1-203ENST00000394419 DCAF11Q8TEB1 546 aa14.32□□□□□ -0.12
ACTN1-203ENST00000394419 CCDC7Q96M83 1385 aa14.32□□□□□ -0.12
ACTN1-203ENST00000394419 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
ACTN1-203ENST00000394419 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-203ENST00000394419 PPP4R2Q9NY27 417 aa14.31□□□□□ -0.12
ACTN1-203ENST00000394419 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
ACTN1-203ENST00000394419 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.121e-6■■■■□ 24.2
ACTN1-203ENST00000394419 MAGI3Q5TCQ9 1506 aa14.3□□□□□ -0.12
ACTN1-203ENST00000394419 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-203ENST00000394419 NUP155O75694 1391 aa14.29□□□□□ -0.12
ACTN1-203ENST00000394419 ZNF608Q9ULD9 1512 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-203ENST00000394419 CCDC136Q96JN2 1154 aa14.28□□□□□ -0.12
ACTN1-203ENST00000394419 CNTLNQ9NXG0 1405 aa14.28□□□□□ -0.12
ACTN1-203ENST00000394419 UGGT2Q9NYU1 1516 aa14.28□□□□□ -0.12
ACTN1-203ENST00000394419 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
ACTN1-203ENST00000394419 IQGAP2Q13576 1575 aa14.27□□□□□ -0.12
ACTN1-203ENST00000394419 DAPK1P53355 1430 aa14.26□□□□□ -0.13
ACTN1-203ENST00000394419 HECW1Q76N89 1606 aa14.26□□□□□ -0.13
ACTN1-203ENST00000394419 MIA2Q96PC5 1412 aa14.25□□□□□ -0.13
ACTN1-203ENST00000394419 ANKRD30BQ9BXX2 1392 aa14.24□□□□□ -0.13
ACTN1-203ENST00000394419 ST20-MTHFSA0A0A6YYL1 179 aa14.24□□□□□ -0.13
ACTN1-203ENST00000394419 ABCC5O15440 1437 aa14.24□□□□□ -0.13
ACTN1-203ENST00000394419 USP47Q96K76 1375 aa14.23□□□□□ -0.13
ACTN1-203ENST00000394419 ANKRD30AQ9BXX3 1397 aa14.23□□□□□ -0.13
ACTN1-203ENST00000394419 SAMD9Q5K651 1589 aa14.23□□□□□ -0.13
ACTN1-203ENST00000394419 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
ACTN1-203ENST00000394419 KDM6BO15054 1643 aa14.22□□□□□ -0.13
ACTN1-203ENST00000394419 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
ACTN1-203ENST00000394419 NPM2Q86SE8 214 aaKnown RBP14.2□□□□□ -0.14
ACTN1-203ENST00000394419 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
ACTN1-203ENST00000394419 ZBED9Q6R2W3 1325 aa14.2□□□□□ -0.14
ACTN1-203ENST00000394419 PLB1Q6P1J6 1458 aa14.2□□□□□ -0.14
ACTN1-203ENST00000394419 CC2D1BQ5T0F9 858 aaKnown RBP14.19□□□□□ -0.14
ACTN1-203ENST00000394419 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
ACTN1-203ENST00000394419 NBR1Q14596 966 aa14.18□□□□□ -0.14
ACTN1-203ENST00000394419 LRRIQ1Q96JM4 1722 aa14.16□□□□□ -0.14
ACTN1-203ENST00000394419 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
ACTN1-203ENST00000394419 ANKRD50Q9ULJ7 1429 aa14.16□□□□□ -0.14
ACTN1-203ENST00000394419 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
ACTN1-203ENST00000394419 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
ACTN1-203ENST00000394419 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
ACTN1-203ENST00000394419 MSH5O43196 834 aa14.14□□□□□ -0.15
ACTN1-203ENST00000394419 TROQ12816 1431 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-203ENST00000394419 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
ACTN1-203ENST00000394419 NUP153P49790 1475 aaKnown RBP14.14□□□□□ -0.15
ACTN1-203ENST00000394419 NUDCQ9Y266 331 aa14.14□□□□□ -0.15
ACTN1-203ENST00000394419 ROCK1Q13464 1354 aa14.14□□□□□ -0.15
ACTN1-203ENST00000394419 DENND4BO75064 1496 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-203ENST00000394419 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
ACTN1-203ENST00000394419 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
ACTN1-203ENST00000394419 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
ACTN1-203ENST00000394419 WDR62O43379 1518 aa14.12□□□□□ -0.15
ACTN1-203ENST00000394419 KIAA1107Q9UPP5 1409 aa14.11□□□□□ -0.15
ACTN1-203ENST00000394419 CAMSAP2Q08AD1 1489 aa14.11□□□□□ -0.15
ACTN1-203ENST00000394419 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
ACTN1-203ENST00000394419 GRIN2AQ12879 1464 aa14.1□□□□□ -0.15
ACTN1-203ENST00000394419 ERICH6BQ5W0A0 696 aa14.1□□□□□ -0.15
ACTN1-203ENST00000394419 ADAMTS12P58397 1594 aa14.1□□□□□ -0.15
ACTN1-203ENST00000394419 NBPF1Q3BBV0 1214 aa14.1□□□□□ -0.15
ACTN1-203ENST00000394419 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
ACTN1-203ENST00000394419 KDM5BQ9UGL1 1544 aa14.08□□□□□ -0.15
ACTN1-203ENST00000394419 DISP1Q96F81 1524 aa14.08□□□□□ -0.16
ACTN1-203ENST00000394419 ARHGEF11O15085 1522 aa14.07□□□□□ -0.16
ACTN1-203ENST00000394419 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
ACTN1-203ENST00000394419 GPATCH8Q9UKJ3 1502 aaKnown RBP14.07□□□□□ -0.16
ACTN1-203ENST00000394419 PNISRQ8TF01 805 aaKnown RBP14.06□□□□□ -0.16
ACTN1-203ENST00000394419 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
ACTN1-203ENST00000394419 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-203ENST00000394419 PTPRGP23470 1445 aa14.05□□□□□ -0.16
ACTN1-203ENST00000394419 PLIN1O60240 522 aa14.04□□□□□ -0.16
ACTN1-203ENST00000394419 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
ACTN1-203ENST00000394419 TEX14Q8IWB6 1497 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 KIAA0556O60303 1618 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 MYBBP1AQ9BQG0 1328 aaKnown RBP14.03□□□□□ -0.16
ACTN1-203ENST00000394419 PZPP20742 1482 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 RALBP1Q15311 655 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-203ENST00000394419 EXOC6Q8TAG9 804 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 PANK3Q9H999 370 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-203ENST00000394419 RCAN3Q9UKA8 241 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 GCC2Q8IWJ2 1684 aa14.03□□□□□ -0.16
ACTN1-203ENST00000394419 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.17
ACTN1-203ENST00000394419 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
ACTN1-203ENST00000394419 CDCA7LQ96GN5 454 aa14.01□□□□□ -0.17
ACTN1-203ENST00000394419 NLRP13Q86W25 1043 aa14.01□□□□□ -0.17
ACTN1-203ENST00000394419 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
ACTN1-203ENST00000394419 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
ACTN1-203ENST00000394419 TMF1P82094 1093 aa14□□□□□ -0.17
ACTN1-203ENST00000394419 KNSTRNQ9Y448 316 aa13.99□□□□□ -0.17
ACTN1-203ENST00000394419 SPATA31E1Q6ZUB1 1445 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms