RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
TFRC-202ENST00000392396 FHOD3Q2V2M9 1422 aa23.44■■□□□ 1.34
TFRC-202ENST00000392396 CHMP4AQ9BY43 222 aa23.44■■□□□ 1.34
TFRC-202ENST00000392396 EIF3AQ14152 1382 aaKnown RBP23.43■■□□□ 1.34
TFRC-202ENST00000392396 ANP32BQ92688 251 aaKnown RBP23.43■■□□□ 1.34
TFRC-202ENST00000392396 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
TFRC-202ENST00000392396 EIF5BO60841 1220 aaKnown RBP23.41■■□□□ 1.34
TFRC-202ENST00000392396 TERF2IPQ9NYB0 399 aa23.41■■□□□ 1.34
TFRC-202ENST00000392396 CDK11BP21127 795 aaKnown RBP23.4■■□□□ 1.34
TFRC-202ENST00000392396 OS9Q13438 667 aaPredicted RBP23.4■■□□□ 1.34
TFRC-202ENST00000392396 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
TFRC-202ENST00000392396 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
TFRC-202ENST00000392396 MS4A1P11836 297 aa23.4■■□□□ 1.34
TFRC-202ENST00000392396 CC2D1BQ5T0F9 858 aaKnown RBP23.4■■□□□ 1.34
TFRC-202ENST00000392396 FKBP8Q14318 412 aa23.38■■□□□ 1.33
TFRC-202ENST00000392396 MEX3CQ5U5Q3 659 aaKnown RBP23.37■■□□□ 1.33
TFRC-202ENST00000392396 SETD5Q9C0A6 1442 aa23.37■■□□□ 1.33
TFRC-202ENST00000392396 CASC1Q6TDU7 716 aa23.36■■□□□ 1.33
TFRC-202ENST00000392396 VGFO15240 615 aaPredicted RBP23.34■■□□□ 1.33
TFRC-202ENST00000392396 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
TFRC-202ENST00000392396 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
TFRC-202ENST00000392396 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
TFRC-202ENST00000392396 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
TFRC-202ENST00000392396 ZNF330Q9Y3S2 320 aaPredicted RBP23.3■■□□□ 1.32
TFRC-202ENST00000392396 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
TFRC-202ENST00000392396 UACAQ9BZF9 1416 aa23.29■■□□□ 1.32
TFRC-202ENST00000392396 ROCK2O75116 1388 aaKnown RBP23.29■■□□□ 1.32
TFRC-202ENST00000392396 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
TFRC-202ENST00000392396 EVA1CP58658 441 aa23.27■■□□□ 1.32
TFRC-202ENST00000392396 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
TFRC-202ENST00000392396 AMPHP49418 695 aa23.26■■□□□ 1.31
TFRC-202ENST00000392396 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.311e-8■■■■■ 27.5
TFRC-202ENST00000392396 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
TFRC-202ENST00000392396 NUTM2FA1L443 756 aa23.22■■□□□ 1.31
TFRC-202ENST00000392396 FOXD1Q16676 465 aa23.21■■□□□ 1.31
TFRC-202ENST00000392396 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
TFRC-202ENST00000392396 ATF3P18847 181 aa23.21■■□□□ 1.31
TFRC-202ENST00000392396 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
TFRC-202ENST00000392396 FRAT1Q92837 279 aaPredicted RBP23.18■■□□□ 1.3
TFRC-202ENST00000392396 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
TFRC-202ENST00000392396 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.38e-8■■□□□ 11.7
TFRC-202ENST00000392396 G3V3G9 751 aa23.15■■□□□ 1.3
TFRC-202ENST00000392396 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
TFRC-202ENST00000392396 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
TFRC-202ENST00000392396 DCAF8L1A6NGE4 600 aa23.14■■□□□ 1.3
TFRC-202ENST00000392396 GTF2E1P29083 439 aaPredicted RBP23.14■■□□□ 1.3
TFRC-202ENST00000392396 HDAC5Q9UQL6 1122 aa23.14■■□□□ 1.3
TFRC-202ENST00000392396 KTN1Q86UP2 1357 aaKnown RBP23.13■■□□□ 1.29
TFRC-202ENST00000392396 CCDC144AA2RUR9 1427 aa23.13■■□□□ 1.29
TFRC-202ENST00000392396 CC2D2AQ9P2K1 1620 aa23.13■■□□□ 1.29
TFRC-202ENST00000392396 FGD1P98174 961 aa23.13■■□□□ 1.29
TFRC-202ENST00000392396 TRAK1Q9UPV9 953 aa23.13■■□□□ 1.29
TFRC-202ENST00000392396 NCLP19338 710 aaKnown RBP23.13■■□□□ 1.29
TFRC-202ENST00000392396 KCNJ4P48050 445 aa23.11■■□□□ 1.29
TFRC-202ENST00000392396 LTV1Q96GA3 475 aaPredicted RBP23.11■■□□□ 1.29
TFRC-202ENST00000392396 IGF1RP08069 1367 aa23.1■■□□□ 1.29
TFRC-202ENST00000392396 PRG4Q92954 1404 aaPredicted RBP23.1■■□□□ 1.29
TFRC-202ENST00000392396 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
TFRC-202ENST00000392396 PSME1Q06323 249 aa23.09■■□□□ 1.29
TFRC-202ENST00000392396 ISY1Q9ULR0 285 aaKnown RBP23.08■■□□□ 1.28
TFRC-202ENST00000392396 MSH5O43196 834 aa23.07■■□□□ 1.28
TFRC-202ENST00000392396 ZRSR1Q15695 479 aaKnown RBP23.07■■□□□ 1.28
TFRC-202ENST00000392396 IPO8O15397 1037 aaKnown RBP23.06■■□□□ 1.28
TFRC-202ENST00000392396 LMOD3Q0VAK6 560 aa23.06■■□□□ 1.28
TFRC-202ENST00000392396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.05■■□□□ 1.28
TFRC-202ENST00000392396 BECN1Q14457 450 aa23.05■■□□□ 1.28
TFRC-202ENST00000392396 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
TFRC-202ENST00000392396 HSPA5P11021 654 aaKnown RBP23.04■■□□□ 1.28
TFRC-202ENST00000392396 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
TFRC-202ENST00000392396 TAF7LQ5H9L4 462 aa23.04■■□□□ 1.28
TFRC-202ENST00000392396 COG3Q96JB2 828 aa23.04■■□□□ 1.28
TFRC-202ENST00000392396 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
TFRC-202ENST00000392396 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
TFRC-202ENST00000392396 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
TFRC-202ENST00000392396 C1orf141Q5JVX7 400 aa23■■□□□ 1.27
TFRC-202ENST00000392396 MIER1Q8N108 512 aa22.99■■□□□ 1.27
TFRC-202ENST00000392396 THEMISQ8N1K5 641 aaPredicted RBP22.99■■□□□ 1.27
TFRC-202ENST00000392396 TULP1O00294 542 aaPredicted RBP22.98■■□□□ 1.27
TFRC-202ENST00000392396 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
TFRC-202ENST00000392396 NESP48681 1621 aa22.98■■□□□ 1.27
TFRC-202ENST00000392396 RALBP1Q15311 655 aa22.98■■□□□ 1.27
TFRC-202ENST00000392396 CFTRP13569 1480 aa22.97■■□□□ 1.27
TFRC-202ENST00000392396 GORABQ5T7V8 394 aa22.97■■□□□ 1.27
TFRC-202ENST00000392396 GOLGA6L22H0YM25 854 aa22.96■■□□□ 1.27
TFRC-202ENST00000392396 PROSER2Q86WR7 435 aaPredicted RBP22.95■■□□□ 1.26
TFRC-202ENST00000392396 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.26
TFRC-202ENST00000392396 STAC3Q96MF2 364 aa22.95■■□□□ 1.26
TFRC-202ENST00000392396 NAP1L2Q9ULW6 460 aaPredicted RBP22.94■■□□□ 1.26
TFRC-202ENST00000392396 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
TFRC-202ENST00000392396 CHMP3Q9Y3E7 222 aa22.93■■□□□ 1.26
TFRC-202ENST00000392396 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
TFRC-202ENST00000392396 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
TFRC-202ENST00000392396 CFAP44Q96MT7 982 aa22.92■■□□□ 1.26
TFRC-202ENST00000392396 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
TFRC-202ENST00000392396 SF3B2Q13435 895 aaKnown RBP22.9■■□□□ 1.26
TFRC-202ENST00000392396 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.25
TFRC-202ENST00000392396 DHX57Q6P158 1386 aaKnown RBP22.88■■□□□ 1.25
TFRC-202ENST00000392396 TEFQ10587 303 aa22.88■■□□□ 1.25
TFRC-202ENST00000392396 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
TFRC-202ENST00000392396 TAOK2Q9UL54 1235 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms