RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SMG6Q86US8 1419 aaKnown RBP4.81□□□□□ -1.64
TRAV39-201ENST00000390466 ZBED9Q6R2W3 1325 aa4.81□□□□□ -1.64
TRAV39-201ENST00000390466 CROCC2H7BZ55 1655 aa4.81□□□□□ -1.64
TRAV39-201ENST00000390466 ANP32CO43423 234 aa4.81□□□□□ -1.64
TRAV39-201ENST00000390466 KIF14Q15058 1648 aa4.81□□□□□ -1.64
TRAV39-201ENST00000390466 KDM5CP41229 1560 aa4.81□□□□□ -1.64
TRAV39-201ENST00000390466 MYOM3Q5VTT5 1437 aa4.8□□□□□ -1.64
TRAV39-201ENST00000390466 CARMIL1Q5VZK9 1371 aa4.8□□□□□ -1.64
TRAV39-201ENST00000390466 DHX29Q7Z478 1369 aaKnown RBP4.8□□□□□ -1.64
TRAV39-201ENST00000390466 CCDC7Q96M83 1385 aa4.8□□□□□ -1.64
TRAV39-201ENST00000390466 ADGBQ8N7X0 1667 aa4.8□□□□□ -1.64
TRAV39-201ENST00000390466 DNMT1P26358 1616 aaKnown RBP4.8□□□□□ -1.64
TRAV39-201ENST00000390466 IRX6P78412 446 aaPredicted RBP4.79□□□□□ -1.64
TRAV39-201ENST00000390466 HIRIP3Q9BW71 556 aaPredicted RBP4.79□□□□□ -1.64
TRAV39-201ENST00000390466 CDK11AQ9UQ88 783 aaPredicted RBP4.79□□□□□ -1.64
TRAV39-201ENST00000390466 NOP58Q9Y2X3 529 aaKnown RBP4.79□□□□□ -1.64
TRAV39-201ENST00000390466 RPRD2Q5VT52 1461 aaKnown RBP4.79□□□□□ -1.64
TRAV39-201ENST00000390466 FMN1Q68DA7 1419 aa4.79□□□□□ -1.64
TRAV39-201ENST00000390466 TONSLQ96HA7 1378 aa4.78□□□□□ -1.64
TRAV39-201ENST00000390466 C11orf95C9JLR9 678 aaPredicted RBP4.78□□□□□ -1.64
TRAV39-201ENST00000390466 RANGAP1P46060 587 aaPredicted RBP4.78□□□□□ -1.64
TRAV39-201ENST00000390466 HNRNPUQ00839 825 aaKnown RBP eCLIP4.78□□□□□ -1.64
TRAV39-201ENST00000390466 ANO8Q9HCE9 1232 aaPredicted RBP4.78□□□□□ -1.64
TRAV39-201ENST00000390466 LAMC3Q9Y6N6 1575 aa4.78□□□□□ -1.64
TRAV39-201ENST00000390466 WDR62O43379 1518 aa4.77□□□□□ -1.65
TRAV39-201ENST00000390466 WASHC2CQ9Y4E1 1318 aa4.77□□□□□ -1.65
TRAV39-201ENST00000390466 B4GALNT3Q6L9W6 998 aa4.77□□□□□ -1.65
TRAV39-201ENST00000390466 POLA1P09884 1462 aaPredicted RBP4.76□□□□□ -1.65
TRAV39-201ENST00000390466 HSPA5P11021 654 aaKnown RBP4.76□□□□□ -1.65
TRAV39-201ENST00000390466 C1QBPQ07021 282 aaKnown RBP4.76□□□□□ -1.65
TRAV39-201ENST00000390466 CEP170Q5SW79 1584 aa4.76□□□□□ -1.65
TRAV39-201ENST00000390466 MIA2Q96PC5 1412 aa4.76□□□□□ -1.65
TRAV39-201ENST00000390466 PRKRIP1Q9H875 184 aaPredicted RBP4.76□□□□□ -1.65
TRAV39-201ENST00000390466 SALL2Q9Y467 1007 aaPredicted RBP4.76□□□□□ -1.65
TRAV39-201ENST00000390466 PBRM1Q86U86 1689 aa4.76□□□□□ -1.65
TRAV39-201ENST00000390466 TOPBP1Q92547 1522 aa4.76□□□□□ -1.65
TRAV39-201ENST00000390466 LRPPRCP42704 1394 aaKnown RBP4.76□□□□□ -1.65
TRAV39-201ENST00000390466 PZPP20742 1482 aa4.75□□□□□ -1.65
TRAV39-201ENST00000390466 ANKRD30BQ9BXX2 1392 aa4.75□□□□□ -1.65
TRAV39-201ENST00000390466 ADCY10Q96PN6 1610 aa4.75□□□□□ -1.65
TRAV39-201ENST00000390466 GAPVD1Q14C86 1478 aa4.75□□□□□ -1.65
TRAV39-201ENST00000390466 ZMYM4Q5VZL5 1548 aa4.74□□□□□ -1.65
TRAV39-201ENST00000390466 ZNF608Q9ULD9 1512 aaPredicted RBP4.74□□□□□ -1.65
TRAV39-201ENST00000390466 FAM50AQ14320 339 aaKnown RBP4.74□□□□□ -1.65
TRAV39-201ENST00000390466 IL27Q8NEV9 243 aa4.74□□□□□ -1.65
TRAV39-201ENST00000390466 CDC42BPAQ5VT25 1732 aa4.74□□□□□ -1.65
TRAV39-201ENST00000390466 RAD54L2Q9Y4B4 1467 aa4.74□□□□□ -1.65
TRAV39-201ENST00000390466 LAMC1P11047 1609 aa4.73□□□□□ -1.65
TRAV39-201ENST00000390466 TARBP1Q13395 1621 aaKnown RBP4.73□□□□□ -1.65
TRAV39-201ENST00000390466 NBPF8Q3BBV2 869 aa4.73□□□□□ -1.65
TRAV39-201ENST00000390466 IPO9Q96P70 1041 aaKnown RBP4.73□□□□□ -1.65
TRAV39-201ENST00000390466 CADPSQ9ULU8 1353 aa4.73□□□□□ -1.65
TRAV39-201ENST00000390466 RALGAPBQ86X10 1494 aa4.73□□□□□ -1.65
TRAV39-201ENST00000390466 ITSN2Q9NZM3 1697 aa4.73□□□□□ -1.65
TRAV39-201ENST00000390466 KIF7Q2M1P5 1343 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 KDM5DQ9BY66 1539 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 ARHGEF12Q9NZN5 1544 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 TRPM1Q7Z4N2 1603 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 MYO5CQ9NQX4 1742 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 ERICH6Q7L0X2 663 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 NUDCQ9Y266 331 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 ROCK1Q13464 1354 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 FANCD2Q9BXW9 1451 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 EPRSP07814 1512 aaKnown RBP4.72□□□□□ -1.65
TRAV39-201ENST00000390466 UHRF1BP1Q6BDS2 1440 aa4.72□□□□□ -1.65
TRAV39-201ENST00000390466 ADAMTS12P58397 1594 aa4.71□□□□□ -1.66
TRAV39-201ENST00000390466 ADGRL2O95490 1459 aa4.71□□□□□ -1.66
TRAV39-201ENST00000390466 NPM3O75607 178 aaKnown RBP4.71□□□□□ -1.66
TRAV39-201ENST00000390466 RNF17Q9BXT8 1623 aaKnown RBP4.71□□□□□ -1.66
TRAV39-201ENST00000390466 CDK13Q14004 1512 aaKnown RBP4.71□□□□□ -1.66
TRAV39-201ENST00000390466 URB2Q14146 1524 aaKnown RBP4.71□□□□□ -1.66
TRAV39-201ENST00000390466 MTUS2Q5JR59 1369 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 EIF4G2P78344 907 aaKnown RBP eCLIP4.7□□□□□ -1.66
TRAV39-201ENST00000390466 NBR1Q14596 966 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 UBE2Q2Q8WVN8 375 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 RIMBP3CA6NJZ7 1639 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 RIMBP3BA6NNM3 1639 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 RIMBP3Q9UFD9 1639 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 CLASP1Q7Z460 1538 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 ABCC5O15440 1437 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 DAPK1P53355 1430 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 IQGAP2Q13576 1575 aa4.7□□□□□ -1.66
TRAV39-201ENST00000390466 INSRP06213 1382 aa4.69□□□□□ -1.66
TRAV39-201ENST00000390466 L3MBTL2Q969R5 705 aa4.69□□□□□ -1.66
TRAV39-201ENST00000390466 MRS2Q9HD23 443 aa4.69□□□□□ -1.66
TRAV39-201ENST00000390466 BLMP54132 1417 aaPredicted RBP4.69□□□□□ -1.66
TRAV39-201ENST00000390466 KIAA0556O60303 1618 aa4.68□□□□□ -1.66
TRAV39-201ENST00000390466 NCBP3Q53F19 620 aaKnown RBP4.68□□□□□ -1.66
TRAV39-201ENST00000390466 PNISRQ8TF01 805 aaKnown RBP4.68□□□□□ -1.66
TRAV39-201ENST00000390466 CCDC136Q96JN2 1154 aa4.68□□□□□ -1.66
TRAV39-201ENST00000390466 PDS5BQ9NTI5 1447 aa4.68□□□□□ -1.66
TRAV39-201ENST00000390466 EIF4G3O43432 1585 aaKnown RBP4.68□□□□□ -1.66
TRAV39-201ENST00000390466 ABCC10Q5T3U5 1492 aa4.68□□□□□ -1.66
TRAV39-201ENST00000390466 NLRP1Q9C000 1473 aa4.68□□□□□ -1.66
TRAV39-201ENST00000390466 MYOM1P52179 1685 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 KIAA0586Q9BVV6 1533 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 CHD1O14646 1710 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 ANP32AP39687 249 aaKnown RBP4.67□□□□□ -1.66
TRAV39-201ENST00000390466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRAV39-201ENST00000390466 BACH2Q9BYV9 841 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms