RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
SEMA6D-206ENST00000389428 GPATCH3Q96I76 525 aa15.09■□□□□ 0.01
SEMA6D-206ENST00000389428 CSPP1Q1MSJ5 1256 aa15.08■□□□□ 0
SEMA6D-206ENST00000389428 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
SEMA6D-206ENST00000389428 CHMP4AQ9BY43 222 aa15.08■□□□□ 0
SEMA6D-206ENST00000389428 CEP162Q5TB80 1403 aa15.08■□□□□ 0
SEMA6D-206ENST00000389428 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
SEMA6D-206ENST00000389428 CCNB3Q8WWL7 1395 aa15.07■□□□□ 0
SEMA6D-206ENST00000389428 KIF27Q86VH2 1401 aa15.05■□□□□ -0
SEMA6D-206ENST00000389428 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
SEMA6D-206ENST00000389428 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
SEMA6D-206ENST00000389428 ERCC6Q03468 1493 aa15.04■□□□□ -0
SEMA6D-206ENST00000389428 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
SEMA6D-206ENST00000389428 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
SEMA6D-206ENST00000389428 KTN1Q86UP2 1357 aaKnown RBP15.02□□□□□ -0.01
SEMA6D-206ENST00000389428 HDAC5Q9UQL6 1122 aa15.02□□□□□ -0.01
SEMA6D-206ENST00000389428 CEP89Q96ST8 783 aa15.02□□□□□ -0.01
SEMA6D-206ENST00000389428 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
SEMA6D-206ENST00000389428 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
SEMA6D-206ENST00000389428 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
SEMA6D-206ENST00000389428 TNNT3P45378 269 aaPredicted RBP15.01□□□□□ -0.01
SEMA6D-206ENST00000389428 RWDD1Q9H446 243 aaPredicted RBP15.01□□□□□ -0.01
SEMA6D-206ENST00000389428 SOX12O15370 315 aa15□□□□□ -0.01
SEMA6D-206ENST00000389428 GORABQ5T7V8 394 aa15□□□□□ -0.01
SEMA6D-206ENST00000389428 G3V3G9 751 aa14.99□□□□□ -0.01
SEMA6D-206ENST00000389428 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
SEMA6D-206ENST00000389428 RASSF8Q8NHQ8 419 aa14.99□□□□□ -0.01
SEMA6D-206ENST00000389428 TAF7LQ5H9L4 462 aa14.98□□□□□ -0.01
SEMA6D-206ENST00000389428 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
SEMA6D-206ENST00000389428 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
SEMA6D-206ENST00000389428 TPM3P06753 285 aa14.97□□□□□ -0.01
SEMA6D-206ENST00000389428 ITPRIPQ8IWB1 547 aa14.97□□□□□ -0.01
SEMA6D-206ENST00000389428 PMFBP1Q8TBY8 1022 aa14.97□□□□□ -0.01
SEMA6D-206ENST00000389428 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
SEMA6D-206ENST00000389428 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
SEMA6D-206ENST00000389428 SETQ01105 290 aaPredicted RBP14.96□□□□□ -0.01
SEMA6D-206ENST00000389428 B4GALNT3Q6L9W6 998 aa14.96□□□□□ -0.01
SEMA6D-206ENST00000389428 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
SEMA6D-206ENST00000389428 APBB1O00213 710 aa14.96□□□□□ -0.02
SEMA6D-206ENST00000389428 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
SEMA6D-206ENST00000389428 STK31Q9BXU1 1019 aa14.95□□□□□ -0.02
SEMA6D-206ENST00000389428 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
SEMA6D-206ENST00000389428 PHF14O94880 888 aa14.94□□□□□ -0.02
SEMA6D-206ENST00000389428 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
SEMA6D-206ENST00000389428 HMMRO75330 724 aa14.94□□□□□ -0.02
SEMA6D-206ENST00000389428 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
SEMA6D-206ENST00000389428 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
SEMA6D-206ENST00000389428 CHMP3Q9Y3E7 222 aa14.93□□□□□ -0.02
SEMA6D-206ENST00000389428 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
SEMA6D-206ENST00000389428 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
SEMA6D-206ENST00000389428 PDE4CQ08493 712 aa14.92□□□□□ -0.02
SEMA6D-206ENST00000389428 MLECQ14165 292 aa14.92□□□□□ -0.02
SEMA6D-206ENST00000389428 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
SEMA6D-206ENST00000389428 KIF3AQ9Y496 699 aa14.92□□□□□ -0.02
SEMA6D-206ENST00000389428 MARCH6O60337 910 aa14.91□□□□□ -0.02
SEMA6D-206ENST00000389428 TPM2P07951 284 aa14.91□□□□□ -0.02
SEMA6D-206ENST00000389428 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
SEMA6D-206ENST00000389428 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
SEMA6D-206ENST00000389428 VPS53Q5VIR6 699 aa14.9□□□□□ -0.02
SEMA6D-206ENST00000389428 CHMP4CQ96CF2 233 aa14.89□□□□□ -0.03
SEMA6D-206ENST00000389428 TRIM6-TRIM34B2RNG4 842 aa14.89□□□□□ -0.03
SEMA6D-206ENST00000389428 TIMELESSQ9UNS1 1208 aa14.89□□□□□ -0.03
SEMA6D-206ENST00000389428 CCDC9Q9Y3X0 531 aaKnown RBP14.89□□□□□ -0.03
SEMA6D-206ENST00000389428 SAFB2Q14151 953 aaKnown RBP eCLIP14.89□□□□□ -0.03
SEMA6D-206ENST00000389428 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
SEMA6D-206ENST00000389428 RALBP1Q15311 655 aa14.88□□□□□ -0.03
SEMA6D-206ENST00000389428 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
SEMA6D-206ENST00000389428 KIF16BQ96L93 1317 aa14.87□□□□□ -0.03
SEMA6D-206ENST00000389428 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
SEMA6D-206ENST00000389428 STK26Q9P289 416 aa14.87□□□□□ -0.03
SEMA6D-206ENST00000389428 ROCK2O75116 1388 aaKnown RBP14.87□□□□□ -0.03
SEMA6D-206ENST00000389428 TPD52L1Q16890 204 aaPredicted RBP14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 TSR1Q2NL82 804 aaKnown RBP14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 U2AF1L5P0DN76 240 aaPredicted RBP14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 U2AF1Q01081 240 aaKnown RBP eCLIP14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 CCDC70Q6NSX1 233 aa14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 KRI1Q8N9T8 703 aaKnown RBP14.86□□□□□ -0.03
SEMA6D-206ENST00000389428 MFAP1P55081 439 aaKnown RBP14.85□□□□□ -0.03
SEMA6D-206ENST00000389428 GZF1Q9H116 711 aaPredicted RBP14.84□□□□□ -0.03
SEMA6D-206ENST00000389428 RCAN3Q9UKA8 241 aa14.84□□□□□ -0.03
SEMA6D-206ENST00000389428 ST18O60284 1047 aa14.83□□□□□ -0.04
SEMA6D-206ENST00000389428 TOMM22Q9NS69 142 aa14.83□□□□□ -0.04
SEMA6D-206ENST00000389428 TPM1P09493 284 aa14.82□□□□□ -0.04
SEMA6D-206ENST00000389428 SF3A1Q15459 793 aaKnown RBP14.82□□□□□ -0.04
SEMA6D-206ENST00000389428 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
SEMA6D-206ENST00000389428 SMC4Q9NTJ3 1288 aa14.82□□□□□ -0.04
SEMA6D-206ENST00000389428 FRAT2O75474 233 aaPredicted RBP14.82□□□□□ -0.04
SEMA6D-206ENST00000389428 ARID3AQ99856 593 aa14.81□□□□□ -0.04
SEMA6D-206ENST00000389428 TCEAL9Q9UHQ7 104 aa14.81□□□□□ -0.04
SEMA6D-206ENST00000389428 SETD5Q9C0A6 1442 aa14.81□□□□□ -0.04
SEMA6D-206ENST00000389428 GPS2Q13227 327 aa14.81□□□□□ -0.04
SEMA6D-206ENST00000389428 TERF2IPQ9NYB0 399 aa14.81□□□□□ -0.04
SEMA6D-206ENST00000389428 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
SEMA6D-206ENST00000389428 H3BQV1 296 aa14.8□□□□□ -0.04
SEMA6D-206ENST00000389428 IFFO2Q5TF58 517 aa14.8□□□□□ -0.04
SEMA6D-206ENST00000389428 SLKQ9H2G2 1235 aaPredicted RBP14.8□□□□□ -0.04
SEMA6D-206ENST00000389428 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
SEMA6D-206ENST00000389428 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
SEMA6D-206ENST00000389428 CTDP1Q9Y5B0 961 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms