RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ITSN2Q9NZM3 1697 aa21.22■□□□□ 0.99
SCFD2-201ENST00000388940 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
SCFD2-201ENST00000388940 MPHOSPH9Q99550 1183 aa21.2■□□□□ 0.98
SCFD2-201ENST00000388940 PLB1Q6P1J6 1458 aa21.18■□□□□ 0.98
SCFD2-201ENST00000388940 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
SCFD2-201ENST00000388940 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
SCFD2-201ENST00000388940 CCER2I3L3R5 266 aa21.16■□□□□ 0.98
SCFD2-201ENST00000388940 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.98
SCFD2-201ENST00000388940 GPATCH8Q9UKJ3 1502 aaKnown RBP21.14■□□□□ 0.98
SCFD2-201ENST00000388940 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
SCFD2-201ENST00000388940 CAMSAP2Q08AD1 1489 aa21.14■□□□□ 0.97
SCFD2-201ENST00000388940 ZNF644Q9H582 1327 aaPredicted RBP21.14■□□□□ 0.97
SCFD2-201ENST00000388940 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
SCFD2-201ENST00000388940 ABCA8O94911 1581 aa21.13■□□□□ 0.97
SCFD2-201ENST00000388940 KIF14Q15058 1648 aa21.11■□□□□ 0.97
SCFD2-201ENST00000388940 CROCC2H7BZ55 1655 aa21.11■□□□□ 0.97
SCFD2-201ENST00000388940 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
SCFD2-201ENST00000388940 ANP32CO43423 234 aa21.1■□□□□ 0.97
SCFD2-201ENST00000388940 FBLN2P98095 1184 aa21.1■□□□□ 0.97
SCFD2-201ENST00000388940 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
SCFD2-201ENST00000388940 CFDP1Q9UEE9 299 aaPredicted RBP21.09■□□□□ 0.97
SCFD2-201ENST00000388940 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.97
SCFD2-201ENST00000388940 NCOA1Q15788 1441 aa21.07■□□□□ 0.96
SCFD2-201ENST00000388940 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
SCFD2-201ENST00000388940 L3MBTL2Q969R5 705 aa21.04■□□□□ 0.96
SCFD2-201ENST00000388940 ATP10BO94823 1461 aa21.03■□□□□ 0.96
SCFD2-201ENST00000388940 ABCC10Q5T3U5 1492 aa21.03■□□□□ 0.96
SCFD2-201ENST00000388940 PZPP20742 1482 aa21.02■□□□□ 0.96
SCFD2-201ENST00000388940 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
SCFD2-201ENST00000388940 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
SCFD2-201ENST00000388940 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
SCFD2-201ENST00000388940 SUPT16HQ9Y5B9 1047 aaKnown RBP21.01■□□□□ 0.95
SCFD2-201ENST00000388940 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.956e-6■■■■□ 25.1
SCFD2-201ENST00000388940 FOXD1Q16676 465 aa21■□□□□ 0.95
SCFD2-201ENST00000388940 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
SCFD2-201ENST00000388940 SHANK2Q9UPX8 1470 aa20.99■□□□□ 0.95
SCFD2-201ENST00000388940 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
SCFD2-201ENST00000388940 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
SCFD2-201ENST00000388940 ZNF777Q9ULD5 760 aaPredicted RBP20.94■□□□□ 0.94
SCFD2-201ENST00000388940 KIAA1107Q9UPP5 1409 aa20.93■□□□□ 0.94
SCFD2-201ENST00000388940 PTPRGP23470 1445 aa20.91■□□□□ 0.94
SCFD2-201ENST00000388940 ARHGEF5Q12774 1597 aa20.91■□□□□ 0.94
SCFD2-201ENST00000388940 ANKRD50Q9ULJ7 1429 aa20.91■□□□□ 0.94
SCFD2-201ENST00000388940 POLR1AO95602 1720 aaPredicted RBP20.91■□□□□ 0.94
SCFD2-201ENST00000388940 NBPF8Q3BBV2 869 aa20.9■□□□□ 0.94
SCFD2-201ENST00000388940 CHD1O14646 1710 aa20.9■□□□□ 0.94
SCFD2-201ENST00000388940 C9orf84Q5VXU9 1444 aa20.89■□□□□ 0.93
SCFD2-201ENST00000388940 SHROOM2Q13796 1616 aa20.88■□□□□ 0.93
SCFD2-201ENST00000388940 SPATA31E1Q6ZUB1 1445 aa20.88■□□□□ 0.93
SCFD2-201ENST00000388940 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
SCFD2-201ENST00000388940 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
SCFD2-201ENST00000388940 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
SCFD2-201ENST00000388940 CCDC7Q96M83 1385 aa20.86■□□□□ 0.93
SCFD2-201ENST00000388940 PREX2Q70Z35 1606 aa20.84■□□□□ 0.93
SCFD2-201ENST00000388940 CDC42BPBQ9Y5S2 1711 aa20.84■□□□□ 0.93
SCFD2-201ENST00000388940 TSPY4P0CV99 314 aa20.82■□□□□ 0.92
SCFD2-201ENST00000388940 TSPY10P0CW01 314 aa20.82■□□□□ 0.92
SCFD2-201ENST00000388940 PKD2Q13563 968 aa20.82■□□□□ 0.92
SCFD2-201ENST00000388940 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
SCFD2-201ENST00000388940 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
SCFD2-201ENST00000388940 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
SCFD2-201ENST00000388940 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
SCFD2-201ENST00000388940 NUP155O75694 1391 aa20.78■□□□□ 0.92
SCFD2-201ENST00000388940 UHRF1BP1Q6BDS2 1440 aa20.76■□□□□ 0.91
SCFD2-201ENST00000388940 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
SCFD2-201ENST00000388940 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
SCFD2-201ENST00000388940 MAST1Q9Y2H9 1570 aa20.74■□□□□ 0.91
SCFD2-201ENST00000388940 HNRNPMP52272 730 aaKnown RBP eCLIP20.74■□□□□ 0.919e-8■■■■□ 23.6
SCFD2-201ENST00000388940 KIF7Q2M1P5 1343 aa20.73■□□□□ 0.91
SCFD2-201ENST00000388940 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
SCFD2-201ENST00000388940 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
SCFD2-201ENST00000388940 KDM5CP41229 1560 aa20.71■□□□□ 0.91
SCFD2-201ENST00000388940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
SCFD2-201ENST00000388940 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
SCFD2-201ENST00000388940 FKBP8Q14318 412 aa20.7■□□□□ 0.9
SCFD2-201ENST00000388940 RALGAPBQ86X10 1494 aa20.7■□□□□ 0.9
SCFD2-201ENST00000388940 ARID4BQ4LE39 1312 aaPredicted RBP20.69■□□□□ 0.9
SCFD2-201ENST00000388940 MYO5CQ9NQX4 1742 aa20.68■□□□□ 0.9
SCFD2-201ENST00000388940 USP47Q96K76 1375 aa20.68■□□□□ 0.9
SCFD2-201ENST00000388940 NEFLP07196 543 aa20.68■□□□□ 0.9
SCFD2-201ENST00000388940 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
SCFD2-201ENST00000388940 BCORL1Q5H9F3 1711 aa20.67■□□□□ 0.9
SCFD2-201ENST00000388940 FAM135AQ9P2D6 1515 aa20.66■□□□□ 0.9
SCFD2-201ENST00000388940 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
SCFD2-201ENST00000388940 ARHGAP5Q13017 1502 aa20.66■□□□□ 0.9
SCFD2-201ENST00000388940 SYCP2Q9BX26 1530 aa20.66■□□□□ 0.9
SCFD2-201ENST00000388940 UNC13BO14795 1591 aa20.66■□□□□ 0.9
SCFD2-201ENST00000388940 HNRNPUQ00839 825 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCFD2-201ENST00000388940 PLXNC1O60486 1568 aa20.65■□□□□ 0.9
SCFD2-201ENST00000388940 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
SCFD2-201ENST00000388940 UHRF1BP1LA0JNW5 1464 aa20.62■□□□□ 0.89
SCFD2-201ENST00000388940 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
SCFD2-201ENST00000388940 DHX29Q7Z478 1369 aaKnown RBP20.59■□□□□ 0.89
SCFD2-201ENST00000388940 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
SCFD2-201ENST00000388940 ROCK2O75116 1388 aaKnown RBP20.58■□□□□ 0.88
SCFD2-201ENST00000388940 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.88
SCFD2-201ENST00000388940 IQGAP3Q86VI3 1631 aa20.57■□□□□ 0.88
SCFD2-201ENST00000388940 PLCH2O75038 1416 aa20.57■□□□□ 0.88
SCFD2-201ENST00000388940 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
SCFD2-201ENST00000388940 TSHZ2Q9NRE2 1034 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms