RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.05
PMS2-202ENST00000380416 RAPGEF3O95398 923 aa14.71□□□□□ -0.05
PMS2-202ENST00000380416 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.06
PMS2-202ENST00000380416 NEO1Q92859 1461 aa14.7□□□□□ -0.06
PMS2-202ENST00000380416 SIGLEC1Q9BZZ2 1709 aa14.69□□□□□ -0.06
PMS2-202ENST00000380416 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
PMS2-202ENST00000380416 LTBP4Q8N2S1 1624 aa14.69□□□□□ -0.06
PMS2-202ENST00000380416 FANCAO15360 1455 aa14.66□□□□□ -0.06
PMS2-202ENST00000380416 PRXQ9BXM0 1461 aa14.65□□□□□ -0.06
PMS2-202ENST00000380416 RICTORQ6R327 1708 aa14.65□□□□□ -0.06
PMS2-202ENST00000380416 POGZQ7Z3K3 1410 aa14.65□□□□□ -0.06
PMS2-202ENST00000380416 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
PMS2-202ENST00000380416 PTPRTO14522 1441 aa14.62□□□□□ -0.07
PMS2-202ENST00000380416 EEA1Q15075 1411 aa14.62□□□□□ -0.07
PMS2-202ENST00000380416 MED1Q15648 1581 aaPredicted RBP14.6□□□□□ -0.07
PMS2-202ENST00000380416 ZMYM4Q5VZL5 1548 aa14.6□□□□□ -0.07
PMS2-202ENST00000380416 AKNAQ7Z591 1439 aa14.58□□□□□ -0.07
PMS2-202ENST00000380416 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
PMS2-202ENST00000380416 ARHGEF12Q9NZN5 1544 aa14.57□□□□□ -0.08
PMS2-202ENST00000380416 FHOD3Q2V2M9 1422 aa14.57□□□□□ -0.08
PMS2-202ENST00000380416 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
PMS2-202ENST00000380416 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
PMS2-202ENST00000380416 ZFYVE16Q7Z3T8 1539 aa14.56□□□□□ -0.08
PMS2-202ENST00000380416 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
PMS2-202ENST00000380416 ATP10BO94823 1461 aa14.53□□□□□ -0.08
PMS2-202ENST00000380416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
PMS2-202ENST00000380416 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
PMS2-202ENST00000380416 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
PMS2-202ENST00000380416 MAGI2Q86UL8 1455 aa14.5□□□□□ -0.09
PMS2-202ENST00000380416 CFAP74Q9C0B2 1584 aa14.5□□□□□ -0.09
PMS2-202ENST00000380416 MLECQ14165 292 aa14.48□□□□□ -0.09
PMS2-202ENST00000380416 HECW1Q76N89 1606 aa14.46□□□□□ -0.09
PMS2-202ENST00000380416 CEBPAP49715 358 aaPredicted RBP14.46□□□□□ -0.09
PMS2-202ENST00000380416 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
PMS2-202ENST00000380416 UBAP1LF5GYI3 381 aa14.45□□□□□ -0.1
PMS2-202ENST00000380416 NCOA1Q15788 1441 aa14.45□□□□□ -0.1
PMS2-202ENST00000380416 ARID3CA6NKF2 412 aa14.43□□□□□ -0.1
PMS2-202ENST00000380416 C3P01024 1663 aa14.42□□□□□ -0.1
PMS2-202ENST00000380416 C9orf84Q5VXU9 1444 aa14.41□□□□□ -0.1
PMS2-202ENST00000380416 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
PMS2-202ENST00000380416 ATP10AO60312 1499 aa14.39□□□□□ -0.11
PMS2-202ENST00000380416 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
PMS2-202ENST00000380416 POTEHQ6S545 545 aa14.39□□□□□ -0.11
PMS2-202ENST00000380416 HSPA1LP34931 641 aa14.38□□□□□ -0.11
PMS2-202ENST00000380416 RAPGEF6Q8TEU7 1601 aa14.37□□□□□ -0.11
PMS2-202ENST00000380416 ZNF335Q9H4Z2 1342 aaPredicted RBP14.37□□□□□ -0.11
PMS2-202ENST00000380416 CAMSAP1Q5T5Y3 1602 aa14.36□□□□□ -0.11
PMS2-202ENST00000380416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.11
PMS2-202ENST00000380416 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
PMS2-202ENST00000380416 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
PMS2-202ENST00000380416 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
PMS2-202ENST00000380416 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
PMS2-202ENST00000380416 REREQ9P2R6 1566 aa14.3□□□□□ -0.12
PMS2-202ENST00000380416 SCAPERQ9BY12 1400 aa14.29□□□□□ -0.12
PMS2-202ENST00000380416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
PMS2-202ENST00000380416 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
PMS2-202ENST00000380416 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
PMS2-202ENST00000380416 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
PMS2-202ENST00000380416 PLA2R1Q13018 1463 aa14.26□□□□□ -0.13
PMS2-202ENST00000380416 KDM5CP41229 1560 aa14.26□□□□□ -0.13
PMS2-202ENST00000380416 AGLP35573 1532 aa14.25□□□□□ -0.13
PMS2-202ENST00000380416 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
PMS2-202ENST00000380416 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
PMS2-202ENST00000380416 ALKQ9UM73 1620 aa14.24□□□□□ -0.13
PMS2-202ENST00000380416 PIP4K2BP78356 416 aa14.24□□□□□ -0.13
PMS2-202ENST00000380416 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
PMS2-202ENST00000380416 NPATQ14207 1427 aa14.24□□□□□ -0.13
PMS2-202ENST00000380416 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
PMS2-202ENST00000380416 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
PMS2-202ENST00000380416 SUPT6HQ7KZ85 1726 aaKnown RBP14.22□□□□□ -0.13
PMS2-202ENST00000380416 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
PMS2-202ENST00000380416 CPS1P31327 1500 aa14.21□□□□□ -0.13
PMS2-202ENST00000380416 ZNF518AQ6AHZ1 1483 aa14.21□□□□□ -0.13
PMS2-202ENST00000380416 TOM1O60784 492 aa14.21□□□□□ -0.13
PMS2-202ENST00000380416 RGS17Q9UGC6 210 aaPredicted RBP14.21□□□□□ -0.13
PMS2-202ENST00000380416 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
PMS2-202ENST00000380416 MYO3AQ8NEV4 1616 aa14.21□□□□□ -0.13
PMS2-202ENST00000380416 PLCH2O75038 1416 aa14.21□□□□□ -0.13
PMS2-202ENST00000380416 PKD2Q13563 968 aa14.2□□□□□ -0.14
PMS2-202ENST00000380416 CNTLNQ9NXG0 1405 aa14.2□□□□□ -0.14
PMS2-202ENST00000380416 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
PMS2-202ENST00000380416 CDK13Q14004 1512 aaKnown RBP14.18□□□□□ -0.14
PMS2-202ENST00000380416 CEP170BQ9Y4F5 1589 aaPredicted RBP14.17□□□□□ -0.14
PMS2-202ENST00000380416 DSG3P32926 999 aa14.17□□□□□ -0.14
PMS2-202ENST00000380416 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
PMS2-202ENST00000380416 MYO5CQ9NQX4 1742 aa14.17□□□□□ -0.14
PMS2-202ENST00000380416 ATP1B4Q9UN42 357 aaPredicted RBP14.15□□□□□ -0.14
PMS2-202ENST00000380416 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
PMS2-202ENST00000380416 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
PMS2-202ENST00000380416 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
PMS2-202ENST00000380416 SETD1AO15047 1707 aaKnown RBP14.13□□□□□ -0.15
PMS2-202ENST00000380416 CAPN15O75808 1086 aa14.13□□□□□ -0.15
PMS2-202ENST00000380416 POLR1AO95602 1720 aaPredicted RBP14.12□□□□□ -0.15
PMS2-202ENST00000380416 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
PMS2-202ENST00000380416 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
PMS2-202ENST00000380416 CLIP1P30622 1438 aa14.12□□□□□ -0.15
PMS2-202ENST00000380416 LRRIQ1Q96JM4 1722 aa14.11□□□□□ -0.15
PMS2-202ENST00000380416 NEURL4Q96JN8 1562 aa14.11□□□□□ -0.15
PMS2-202ENST00000380416 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
PMS2-202ENST00000380416 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms