RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 RRP1P56182 461 aaKnown RBP16.15■□□□□ 0.18
HERC6-203ENST00000380265 SKAP1Q86WV1 359 aa16.14■□□□□ 0.18
HERC6-203ENST00000380265 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.18
HERC6-203ENST00000380265 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.17
HERC6-203ENST00000380265 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
HERC6-203ENST00000380265 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
HERC6-203ENST00000380265 GSE1Q14687 1217 aa16.13■□□□□ 0.17
HERC6-203ENST00000380265 CFTRP13569 1480 aa16.12■□□□□ 0.17
HERC6-203ENST00000380265 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
HERC6-203ENST00000380265 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
HERC6-203ENST00000380265 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
HERC6-203ENST00000380265 PLIN1O60240 522 aa16.1■□□□□ 0.17
HERC6-203ENST00000380265 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
HERC6-203ENST00000380265 PNISRQ8TF01 805 aaKnown RBP16.1■□□□□ 0.17
HERC6-203ENST00000380265 NFKBIBQ15653 356 aa16.08■□□□□ 0.16
HERC6-203ENST00000380265 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
HERC6-203ENST00000380265 KDM2AQ9Y2K7 1162 aa16.05■□□□□ 0.16
HERC6-203ENST00000380265 MS4A1P11836 297 aa16.05■□□□□ 0.16
HERC6-203ENST00000380265 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
HERC6-203ENST00000380265 USP47Q96K76 1375 aa16.03■□□□□ 0.16
HERC6-203ENST00000380265 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
HERC6-203ENST00000380265 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.15
HERC6-203ENST00000380265 CARD11Q9BXL7 1154 aa16.02■□□□□ 0.15
HERC6-203ENST00000380265 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.15
HERC6-203ENST00000380265 CRBNQ96SW2 442 aa16.01■□□□□ 0.15
HERC6-203ENST00000380265 ARXQ96QS3 562 aa16■□□□□ 0.15
HERC6-203ENST00000380265 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
HERC6-203ENST00000380265 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
HERC6-203ENST00000380265 UBE2Q2Q8WVN8 375 aa16■□□□□ 0.15
HERC6-203ENST00000380265 RGS3P49796 1198 aa15.99■□□□□ 0.15
HERC6-203ENST00000380265 CADPSQ9ULU8 1353 aa15.98■□□□□ 0.15
HERC6-203ENST00000380265 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
HERC6-203ENST00000380265 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
HERC6-203ENST00000380265 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.15
HERC6-203ENST00000380265 MYBBP1AQ9BQG0 1328 aaKnown RBP15.96■□□□□ 0.15
HERC6-203ENST00000380265 FRAT2O75474 233 aaPredicted RBP15.96■□□□□ 0.14
HERC6-203ENST00000380265 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
HERC6-203ENST00000380265 RPRD2Q5VT52 1461 aaKnown RBP15.94■□□□□ 0.14
HERC6-203ENST00000380265 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
HERC6-203ENST00000380265 ST20-MTHFSA0A0A6YYL1 179 aa15.94■□□□□ 0.14
HERC6-203ENST00000380265 SPATA31E1Q6ZUB1 1445 aa15.93■□□□□ 0.14
HERC6-203ENST00000380265 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
HERC6-203ENST00000380265 ZNF644Q9H582 1327 aaPredicted RBP15.93■□□□□ 0.14
HERC6-203ENST00000380265 RALBP1Q15311 655 aa15.93■□□□□ 0.14
HERC6-203ENST00000380265 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
HERC6-203ENST00000380265 PKD2Q13563 968 aa15.92■□□□□ 0.14
HERC6-203ENST00000380265 KDM6BO15054 1643 aa15.92■□□□□ 0.14
HERC6-203ENST00000380265 SUPT6HQ7KZ85 1726 aaKnown RBP15.92■□□□□ 0.14
HERC6-203ENST00000380265 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
HERC6-203ENST00000380265 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
HERC6-203ENST00000380265 NLRP13Q86W25 1043 aa15.9■□□□□ 0.14
HERC6-203ENST00000380265 EHBP1L1Q8N3D4 1523 aa15.9■□□□□ 0.14
HERC6-203ENST00000380265 BRD4O60885 1362 aaPredicted RBP15.89■□□□□ 0.13
HERC6-203ENST00000380265 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
HERC6-203ENST00000380265 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
HERC6-203ENST00000380265 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
HERC6-203ENST00000380265 HECW1Q76N89 1606 aa15.88■□□□□ 0.13
HERC6-203ENST00000380265 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
HERC6-203ENST00000380265 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
HERC6-203ENST00000380265 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
HERC6-203ENST00000380265 DCAF11Q8TEB1 546 aa15.87■□□□□ 0.13
HERC6-203ENST00000380265 KTN1Q86UP2 1357 aaKnown RBP15.86■□□□□ 0.13
HERC6-203ENST00000380265 SLKQ9H2G2 1235 aaPredicted RBP15.85■□□□□ 0.13
HERC6-203ENST00000380265 UGGT2Q9NYU1 1516 aa15.85■□□□□ 0.13
HERC6-203ENST00000380265 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
HERC6-203ENST00000380265 ARID4BQ4LE39 1312 aaPredicted RBP15.84■□□□□ 0.13
HERC6-203ENST00000380265 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
HERC6-203ENST00000380265 LRPPRCP42704 1394 aaKnown RBP15.83■□□□□ 0.12
HERC6-203ENST00000380265 CENPQQ7L2Z9 268 aaPredicted RBP15.82■□□□□ 0.12
HERC6-203ENST00000380265 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
HERC6-203ENST00000380265 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
HERC6-203ENST00000380265 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
HERC6-203ENST00000380265 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
HERC6-203ENST00000380265 MAGI3Q5TCQ9 1506 aa15.8■□□□□ 0.12
HERC6-203ENST00000380265 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
HERC6-203ENST00000380265 NAP1L5Q96NT1 182 aaPredicted RBP15.8■□□□□ 0.12
HERC6-203ENST00000380265 POGKQ9P215 609 aa15.79■□□□□ 0.12
HERC6-203ENST00000380265 DAPK1P53355 1430 aa15.79■□□□□ 0.12
HERC6-203ENST00000380265 TCOF1Q13428 1488 aaKnown RBP15.78■□□□□ 0.12
HERC6-203ENST00000380265 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
HERC6-203ENST00000380265 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
HERC6-203ENST00000380265 FBLN2P98095 1184 aa15.78■□□□□ 0.12
HERC6-203ENST00000380265 GCC2Q8IWJ2 1684 aa15.78■□□□□ 0.12
HERC6-203ENST00000380265 CDK13Q14004 1512 aaKnown RBP15.77■□□□□ 0.12
HERC6-203ENST00000380265 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.12
HERC6-203ENST00000380265 C8orf34Q49A92 452 aa15.76■□□□□ 0.11
HERC6-203ENST00000380265 ABCC5O15440 1437 aa15.75■□□□□ 0.11
HERC6-203ENST00000380265 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
HERC6-203ENST00000380265 BECN1Q14457 450 aa15.75■□□□□ 0.11
HERC6-203ENST00000380265 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
HERC6-203ENST00000380265 CTTNBP2Q8WZ74 1663 aa15.75■□□□□ 0.11
HERC6-203ENST00000380265 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
HERC6-203ENST00000380265 SPRYD3Q8NCJ5 442 aa15.74■□□□□ 0.11
HERC6-203ENST00000380265 GZF1Q9H116 711 aaPredicted RBP15.74■□□□□ 0.11
HERC6-203ENST00000380265 NUP155O75694 1391 aa15.74■□□□□ 0.11
HERC6-203ENST00000380265 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
HERC6-203ENST00000380265 ROCK1Q13464 1354 aa15.73■□□□□ 0.11
HERC6-203ENST00000380265 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
HERC6-203ENST00000380265 PANK3Q9H999 370 aa15.73■□□□□ 0.11
HERC6-203ENST00000380265 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms