RNA–Protein interactions for RNA: ENST00000380241.7

CTPS2-202, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-202ENST00000380241 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
CTPS2-202ENST00000380241 PNNQ9H307 717 aaKnown RBP12.43□□□□□ -0.42
CTPS2-202ENST00000380241 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
CTPS2-202ENST00000380241 RRAGDQ9NQL2 400 aaPredicted RBP12.42□□□□□ -0.42
CTPS2-202ENST00000380241 RRP1P56182 461 aaKnown RBP12.42□□□□□ -0.42
CTPS2-202ENST00000380241 L1TD1Q5T7N2 865 aaKnown RBP12.42□□□□□ -0.42
CTPS2-202ENST00000380241 UACAQ9BZF9 1416 aa12.41□□□□□ -0.42
CTPS2-202ENST00000380241 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
CTPS2-202ENST00000380241 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
CTPS2-202ENST00000380241 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
CTPS2-202ENST00000380241 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.42
CTPS2-202ENST00000380241 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
CTPS2-202ENST00000380241 NCOA1Q15788 1441 aa12.4□□□□□ -0.43
CTPS2-202ENST00000380241 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
CTPS2-202ENST00000380241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTPS2-202ENST00000380241 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
CTPS2-202ENST00000380241 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
CTPS2-202ENST00000380241 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
CTPS2-202ENST00000380241 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
CTPS2-202ENST00000380241 CLCN1P35523 988 aa12.34□□□□□ -0.43
CTPS2-202ENST00000380241 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.43
CTPS2-202ENST00000380241 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
CTPS2-202ENST00000380241 KIF27Q86VH2 1401 aa12.33□□□□□ -0.44
CTPS2-202ENST00000380241 SENP3-EIF4A1A0A087X0R7 540 aa12.33□□□□□ -0.44
CTPS2-202ENST00000380241 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
CTPS2-202ENST00000380241 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
CTPS2-202ENST00000380241 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
CTPS2-202ENST00000380241 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
CTPS2-202ENST00000380241 HFM1A2PYH4 1435 aa12.32□□□□□ -0.44
CTPS2-202ENST00000380241 POGKQ9P215 609 aa12.31□□□□□ -0.44
CTPS2-202ENST00000380241 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
CTPS2-202ENST00000380241 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
CTPS2-202ENST00000380241 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
CTPS2-202ENST00000380241 NESP48681 1621 aa12.28□□□□□ -0.44
CTPS2-202ENST00000380241 AAMPQ13685 434 aa12.27□□□□□ -0.45
CTPS2-202ENST00000380241 L3MBTL2Q969R5 705 aa12.27□□□□□ -0.45
CTPS2-202ENST00000380241 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
CTPS2-202ENST00000380241 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
CTPS2-202ENST00000380241 PDS5BQ9NTI5 1447 aa12.26□□□□□ -0.45
CTPS2-202ENST00000380241 GOLGA6L3A6NEY3 463 aa12.26□□□□□ -0.45
CTPS2-202ENST00000380241 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
CTPS2-202ENST00000380241 PDE3BQ13370 1112 aa12.25□□□□□ -0.45
CTPS2-202ENST00000380241 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
CTPS2-202ENST00000380241 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
CTPS2-202ENST00000380241 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
CTPS2-202ENST00000380241 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
CTPS2-202ENST00000380241 PDCL3Q9H2J4 239 aa12.24□□□□□ -0.45
CTPS2-202ENST00000380241 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
CTPS2-202ENST00000380241 NAIPQ13075 1403 aa12.24□□□□□ -0.45
CTPS2-202ENST00000380241 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
CTPS2-202ENST00000380241 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
CTPS2-202ENST00000380241 TPM2P07951 284 aa12.23□□□□□ -0.45
CTPS2-202ENST00000380241 CALD1Q05682 793 aaKnown RBP12.23□□□□□ -0.45
CTPS2-202ENST00000380241 CENPJQ9HC77 1338 aaPredicted RBP12.23□□□□□ -0.45
CTPS2-202ENST00000380241 BECN1Q14457 450 aa12.23□□□□□ -0.45
CTPS2-202ENST00000380241 CRBNQ96SW2 442 aa12.23□□□□□ -0.45
CTPS2-202ENST00000380241 XRCC6P12956 609 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTPS2-202ENST00000380241 C8orf34Q49A92 452 aa12.22□□□□□ -0.45
CTPS2-202ENST00000380241 CENPQQ7L2Z9 268 aaPredicted RBP12.22□□□□□ -0.45
CTPS2-202ENST00000380241 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
CTPS2-202ENST00000380241 PLIN1O60240 522 aa12.2□□□□□ -0.46
CTPS2-202ENST00000380241 LRPPRCP42704 1394 aaKnown RBP12.2□□□□□ -0.46
CTPS2-202ENST00000380241 SPATA31E1Q6ZUB1 1445 aa12.19□□□□□ -0.46
CTPS2-202ENST00000380241 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
CTPS2-202ENST00000380241 ESPNB1AK53 854 aa12.18□□□□□ -0.46
CTPS2-202ENST00000380241 NBPF8Q3BBV2 869 aa12.18□□□□□ -0.46
CTPS2-202ENST00000380241 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
CTPS2-202ENST00000380241 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CTPS2-202ENST00000380241 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
CTPS2-202ENST00000380241 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
CTPS2-202ENST00000380241 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
CTPS2-202ENST00000380241 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
CTPS2-202ENST00000380241 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
CTPS2-202ENST00000380241 ARID4BQ4LE39 1312 aaPredicted RBP12.17□□□□□ -0.46
CTPS2-202ENST00000380241 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
CTPS2-202ENST00000380241 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
CTPS2-202ENST00000380241 RGS3P49796 1198 aa12.16□□□□□ -0.46
CTPS2-202ENST00000380241 MRE11P49959 708 aa12.16□□□□□ -0.46
CTPS2-202ENST00000380241 POLR1AO95602 1720 aaPredicted RBP12.16□□□□□ -0.46
CTPS2-202ENST00000380241 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
CTPS2-202ENST00000380241 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
CTPS2-202ENST00000380241 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
CTPS2-202ENST00000380241 MPHOSPH9Q99550 1183 aa12.15□□□□□ -0.47
CTPS2-202ENST00000380241 RRP7BPQ9NSQ0 103 aa12.15□□□□□ -0.47
CTPS2-202ENST00000380241 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
CTPS2-202ENST00000380241 PRDM4Q9UKN5 801 aa12.14□□□□□ -0.47
CTPS2-202ENST00000380241 KIF15Q9NS87 1388 aa12.14□□□□□ -0.47
CTPS2-202ENST00000380241 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
CTPS2-202ENST00000380241 RALBP1Q15311 655 aa12.14□□□□□ -0.47
CTPS2-202ENST00000380241 MTUS2Q5JR59 1369 aa12.14□□□□□ -0.47
CTPS2-202ENST00000380241 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CTPS2-202ENST00000380241 GZF1Q9H116 711 aaPredicted RBP12.14□□□□□ -0.47
CTPS2-202ENST00000380241 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
CTPS2-202ENST00000380241 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
CTPS2-202ENST00000380241 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
CTPS2-202ENST00000380241 CUX1P39880 1505 aa12.11□□□□□ -0.47
CTPS2-202ENST00000380241 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
CTPS2-202ENST00000380241 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
CTPS2-202ENST00000380241 MAP7D2Q96T17 732 aa12.11□□□□□ -0.47
CTPS2-202ENST00000380241 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms