RNA–Protein interactions for RNA: ENST00000377890.6

SLC3A2-203, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-203ENST00000377890 PTPRGP23470 1445 aa23.88■■□□□ 1.41
SLC3A2-203ENST00000377890 KDM6BO15054 1643 aa23.88■■□□□ 1.41
SLC3A2-203ENST00000377890 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
SLC3A2-203ENST00000377890 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
SLC3A2-203ENST00000377890 KDM5BQ9UGL1 1544 aa23.86■■□□□ 1.41
SLC3A2-203ENST00000377890 ZNF644Q9H582 1327 aaPredicted RBP23.86■■□□□ 1.41
SLC3A2-203ENST00000377890 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
SLC3A2-203ENST00000377890 GPATCH8Q9UKJ3 1502 aaKnown RBP23.82■■□□□ 1.4
SLC3A2-203ENST00000377890 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
SLC3A2-203ENST00000377890 DAPK1P53355 1430 aa23.8■■□□□ 1.4
SLC3A2-203ENST00000377890 DNMT1P26358 1616 aaKnown RBP23.8■■□□□ 1.4
SLC3A2-203ENST00000377890 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
SLC3A2-203ENST00000377890 ABCC5O15440 1437 aa23.79■■□□□ 1.4
SLC3A2-203ENST00000377890 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
SLC3A2-203ENST00000377890 ITSN2Q9NZM3 1697 aa23.78■■□□□ 1.4
SLC3A2-203ENST00000377890 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
SLC3A2-203ENST00000377890 ABCC10Q5T3U5 1492 aa23.77■■□□□ 1.39
SLC3A2-203ENST00000377890 CAMSAP2Q08AD1 1489 aa23.76■■□□□ 1.39
SLC3A2-203ENST00000377890 PLEKHD1A6NEE1 506 aa23.75■■□□□ 1.39
SLC3A2-203ENST00000377890 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
SLC3A2-203ENST00000377890 CFDP1Q9UEE9 299 aaPredicted RBP23.73■■□□□ 1.39
SLC3A2-203ENST00000377890 CDC42BPAQ5VT25 1732 aa23.73■■□□□ 1.39
SLC3A2-203ENST00000377890 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
SLC3A2-203ENST00000377890 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
SLC3A2-203ENST00000377890 ZNF777Q9ULD5 760 aaPredicted RBP23.65■■□□□ 1.38
SLC3A2-203ENST00000377890 CROCC2H7BZ55 1655 aa23.63■■□□□ 1.37
SLC3A2-203ENST00000377890 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
SLC3A2-203ENST00000377890 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
SLC3A2-203ENST00000377890 ANP32CO43423 234 aa23.61■■□□□ 1.37
SLC3A2-203ENST00000377890 FOXD1Q16676 465 aa23.59■■□□□ 1.37
SLC3A2-203ENST00000377890 ADGBQ8N7X0 1667 aa23.58■■□□□ 1.37
SLC3A2-203ENST00000377890 NCOA1Q15788 1441 aa23.58■■□□□ 1.37
SLC3A2-203ENST00000377890 RPRD2Q5VT52 1461 aaKnown RBP23.58■■□□□ 1.36
SLC3A2-203ENST00000377890 SUPT16HQ9Y5B9 1047 aaKnown RBP23.58■■□□□ 1.36
SLC3A2-203ENST00000377890 ADGRL2O95490 1459 aa23.57■■□□□ 1.36
SLC3A2-203ENST00000377890 L3MBTL2Q969R5 705 aa23.56■■□□□ 1.36
SLC3A2-203ENST00000377890 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
SLC3A2-203ENST00000377890 TTC37Q6PGP7 1564 aa23.55■■□□□ 1.36
SLC3A2-203ENST00000377890 PREX2Q70Z35 1606 aa23.55■■□□□ 1.36
SLC3A2-203ENST00000377890 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
SLC3A2-203ENST00000377890 TEX14Q8IWB6 1497 aa23.54■■□□□ 1.36
SLC3A2-203ENST00000377890 UHRF1BP1LA0JNW5 1464 aa23.53■■□□□ 1.36
SLC3A2-203ENST00000377890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.53■■□□□ 1.364e-6■■□□□ 14.5
SLC3A2-203ENST00000377890 PZPP20742 1482 aa23.53■■□□□ 1.36
SLC3A2-203ENST00000377890 ZCCHC11Q5TAX3 1644 aaKnown RBP23.53■■□□□ 1.36
SLC3A2-203ENST00000377890 SAMD9LQ8IVG5 1584 aa23.52■■□□□ 1.36
SLC3A2-203ENST00000377890 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
SLC3A2-203ENST00000377890 MBD5Q9P267 1494 aa23.5■■□□□ 1.35
SLC3A2-203ENST00000377890 SHANK2Q9UPX8 1470 aa23.5■■□□□ 1.35
SLC3A2-203ENST00000377890 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
SLC3A2-203ENST00000377890 EIF4G2P78344 907 aaKnown RBP eCLIP23.48■■□□□ 1.35
SLC3A2-203ENST00000377890 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
SLC3A2-203ENST00000377890 ARHGEF5Q12774 1597 aa23.47■■□□□ 1.35
SLC3A2-203ENST00000377890 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
SLC3A2-203ENST00000377890 HNRNPMP52272 730 aaKnown RBP eCLIP23.46■■□□□ 1.351e-20■□□□□ 11
SLC3A2-203ENST00000377890 NBPF8Q3BBV2 869 aa23.43■■□□□ 1.34
SLC3A2-203ENST00000377890 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
SLC3A2-203ENST00000377890 MYO5CQ9NQX4 1742 aa23.41■■□□□ 1.34
SLC3A2-203ENST00000377890 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
SLC3A2-203ENST00000377890 KIAA1107Q9UPP5 1409 aa23.4■■□□□ 1.34
SLC3A2-203ENST00000377890 SYCP2Q9BX26 1530 aa23.4■■□□□ 1.34
SLC3A2-203ENST00000377890 CCDC141Q6ZP82 1450 aa23.4■■□□□ 1.34
SLC3A2-203ENST00000377890 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
SLC3A2-203ENST00000377890 TSPY4P0CV99 314 aa23.37■■□□□ 1.33
SLC3A2-203ENST00000377890 TSPY10P0CW01 314 aa23.37■■□□□ 1.33
SLC3A2-203ENST00000377890 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
SLC3A2-203ENST00000377890 CCDC7Q96M83 1385 aa23.35■■□□□ 1.33
SLC3A2-203ENST00000377890 C11orf95C9JLR9 678 aaPredicted RBP23.35■■□□□ 1.33
SLC3A2-203ENST00000377890 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
SLC3A2-203ENST00000377890 PLCH2O75038 1416 aa23.33■■□□□ 1.33
SLC3A2-203ENST00000377890 ARHGEF12Q9NZN5 1544 aa23.32■■□□□ 1.32
SLC3A2-203ENST00000377890 OSCARQ8IYS5 282 aa23.32■■□□□ 1.32
SLC3A2-203ENST00000377890 PKD2Q13563 968 aa23.31■■□□□ 1.32
SLC3A2-203ENST00000377890 KDM5DQ9BY66 1539 aa23.31■■□□□ 1.32
SLC3A2-203ENST00000377890 POLR1AO95602 1720 aaPredicted RBP23.29■■□□□ 1.32
SLC3A2-203ENST00000377890 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
SLC3A2-203ENST00000377890 MAST1Q9Y2H9 1570 aa23.29■■□□□ 1.32
SLC3A2-203ENST00000377890 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
SLC3A2-203ENST00000377890 PLEKHH2Q8IVE3 1493 aa23.26■■□□□ 1.31
SLC3A2-203ENST00000377890 NUP155O75694 1391 aa23.25■■□□□ 1.31
SLC3A2-203ENST00000377890 ABCC1P33527 1531 aa23.24■■□□□ 1.31
SLC3A2-203ENST00000377890 KIF7Q2M1P5 1343 aa23.23■■□□□ 1.31
SLC3A2-203ENST00000377890 FKBP8Q14318 412 aa23.22■■□□□ 1.31
SLC3A2-203ENST00000377890 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
SLC3A2-203ENST00000377890 EFCAB2Q5VUJ9 269 aa23.21■■□□□ 1.31
SLC3A2-203ENST00000377890 ARAP3Q8WWN8 1544 aa23.2■■□□□ 1.3
SLC3A2-203ENST00000377890 UHRF1BP1Q6BDS2 1440 aa23.19■■□□□ 1.3
SLC3A2-203ENST00000377890 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
SLC3A2-203ENST00000377890 TRAPPC8Q9Y2L5 1435 aa23.19■■□□□ 1.3
SLC3A2-203ENST00000377890 ASXL2Q76L83 1435 aa23.18■■□□□ 1.3
SLC3A2-203ENST00000377890 ABCA9Q8IUA7 1624 aa23.17■■□□□ 1.3
SLC3A2-203ENST00000377890 KDM5CP41229 1560 aa23.16■■□□□ 1.3
SLC3A2-203ENST00000377890 USP47Q96K76 1375 aa23.16■■□□□ 1.3
SLC3A2-203ENST00000377890 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
SLC3A2-203ENST00000377890 CCDC184Q52MB2 194 aa23.15■■□□□ 1.3
SLC3A2-203ENST00000377890 RALGAPBQ86X10 1494 aa23.15■■□□□ 1.3
SLC3A2-203ENST00000377890 BCORL1Q5H9F3 1711 aa23.15■■□□□ 1.3
SLC3A2-203ENST00000377890 FAM135AQ9P2D6 1515 aa23.14■■□□□ 1.29
SLC3A2-203ENST00000377890 NEFLP07196 543 aa23.14■■□□□ 1.29
SLC3A2-203ENST00000377890 BCANQ96GW7 911 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms