RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 STK26Q9P289 416 aa23.26■■□□□ 1.31
CLSTN1-202ENST00000377298 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
CLSTN1-202ENST00000377298 MS4A1P11836 297 aa23.24■■□□□ 1.31
CLSTN1-202ENST00000377298 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
CLSTN1-202ENST00000377298 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
CLSTN1-202ENST00000377298 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
CLSTN1-202ENST00000377298 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
CLSTN1-202ENST00000377298 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
CLSTN1-202ENST00000377298 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
CLSTN1-202ENST00000377298 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
CLSTN1-202ENST00000377298 BECN1Q14457 450 aa23.2■■□□□ 1.3
CLSTN1-202ENST00000377298 NBR1Q14596 966 aa23.19■■□□□ 1.3
CLSTN1-202ENST00000377298 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
CLSTN1-202ENST00000377298 ANP32EQ9BTT0 268 aa23.18■■□□□ 1.3
CLSTN1-202ENST00000377298 IGF1RP08069 1367 aa23.18■■□□□ 1.3
CLSTN1-202ENST00000377298 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
CLSTN1-202ENST00000377298 DDRGK1Q96HY6 314 aa23.18■■□□□ 1.3
CLSTN1-202ENST00000377298 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
CLSTN1-202ENST00000377298 FRAT1Q92837 279 aaPredicted RBP23.17■■□□□ 1.3
CLSTN1-202ENST00000377298 CASC1Q6TDU7 716 aa23.15■■□□□ 1.3
CLSTN1-202ENST00000377298 SOX12O15370 315 aa23.14■■□□□ 1.29
CLSTN1-202ENST00000377298 NPHP1O15259 732 aa23.13■■□□□ 1.29
CLSTN1-202ENST00000377298 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
CLSTN1-202ENST00000377298 L3MBTL2Q969R5 705 aa23.12■■□□□ 1.29
CLSTN1-202ENST00000377298 EID1Q9Y6B2 187 aa23.11■■□□□ 1.29
CLSTN1-202ENST00000377298 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
CLSTN1-202ENST00000377298 RALBP1Q15311 655 aa23.1■■□□□ 1.29
CLSTN1-202ENST00000377298 CYB5RLQ6IPT4 315 aa23.05■■□□□ 1.28
CLSTN1-202ENST00000377298 RTF1Q92541 710 aaKnown RBP23.05■■□□□ 1.28
CLSTN1-202ENST00000377298 TERF2IPQ9NYB0 399 aa23.03■■□□□ 1.28
CLSTN1-202ENST00000377298 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
CLSTN1-202ENST00000377298 NCLP19338 710 aaKnown RBP23.01■■□□□ 1.27
CLSTN1-202ENST00000377298 CCDC144AA2RUR9 1427 aa23■■□□□ 1.27
CLSTN1-202ENST00000377298 CALD1Q05682 793 aaKnown RBP22.99■■□□□ 1.27
CLSTN1-202ENST00000377298 OS9Q13438 667 aaPredicted RBP22.99■■□□□ 1.27
CLSTN1-202ENST00000377298 GOLGA6L22H0YM25 854 aa22.99■■□□□ 1.27
CLSTN1-202ENST00000377298 U2AF1L5P0DN76 240 aaPredicted RBP22.99■■□□□ 1.27
CLSTN1-202ENST00000377298 U2AF1Q01081 240 aaKnown RBP eCLIP22.99■■□□□ 1.27
CLSTN1-202ENST00000377298 RGS3P49796 1198 aa22.97■■□□□ 1.27
CLSTN1-202ENST00000377298 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
CLSTN1-202ENST00000377298 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.277e-7■■■■■ 35.9
CLSTN1-202ENST00000377298 CFTRP13569 1480 aa22.93■■□□□ 1.26
CLSTN1-202ENST00000377298 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
CLSTN1-202ENST00000377298 MYOM3Q5VTT5 1437 aa22.93■■□□□ 1.26
CLSTN1-202ENST00000377298 CDK11BP21127 795 aaKnown RBP22.92■■□□□ 1.26
CLSTN1-202ENST00000377298 IPO8O15397 1037 aaKnown RBP22.92■■□□□ 1.26
CLSTN1-202ENST00000377298 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
CLSTN1-202ENST00000377298 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
CLSTN1-202ENST00000377298 CSB-PGBD3P0DP91 1061 aa22.91■■□□□ 1.26
CLSTN1-202ENST00000377298 DHX57Q6P158 1386 aaKnown RBP22.9■■□□□ 1.26
CLSTN1-202ENST00000377298 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.26
CLSTN1-202ENST00000377298 NGDNQ8NEJ9 315 aaKnown RBP22.89■■□□□ 1.25
CLSTN1-202ENST00000377298 TRAK1Q9UPV9 953 aa22.88■■□□□ 1.25
CLSTN1-202ENST00000377298 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
CLSTN1-202ENST00000377298 B4GALNT3Q6L9W6 998 aa22.85■■□□□ 1.25
CLSTN1-202ENST00000377298 CUX1P39880 1505 aa22.84■■□□□ 1.25
CLSTN1-202ENST00000377298 ST20-MTHFSA0A0A6YYL1 179 aa22.82■■□□□ 1.24
CLSTN1-202ENST00000377298 GOLGA2Q08379 1002 aa22.82■■□□□ 1.24
CLSTN1-202ENST00000377298 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
CLSTN1-202ENST00000377298 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
CLSTN1-202ENST00000377298 FAM69CQ0P6D2 419 aa22.8■■□□□ 1.24
CLSTN1-202ENST00000377298 RCAN3Q9UKA8 241 aa22.8■■□□□ 1.24
CLSTN1-202ENST00000377298 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
CLSTN1-202ENST00000377298 KCNJ4P48050 445 aa22.8■■□□□ 1.24
CLSTN1-202ENST00000377298 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
CLSTN1-202ENST00000377298 CFAP44Q96MT7 982 aa22.79■■□□□ 1.24
CLSTN1-202ENST00000377298 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
CLSTN1-202ENST00000377298 ERICH6BQ5W0A0 696 aa22.77■■□□□ 1.24
CLSTN1-202ENST00000377298 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
CLSTN1-202ENST00000377298 ZRSR1Q15695 479 aaKnown RBP22.77■■□□□ 1.24
CLSTN1-202ENST00000377298 FGD1P98174 961 aa22.77■■□□□ 1.24
CLSTN1-202ENST00000377298 KIF21BO75037 1637 aa22.77■■□□□ 1.24
CLSTN1-202ENST00000377298 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
CLSTN1-202ENST00000377298 AMPHP49418 695 aa22.76■■□□□ 1.23
CLSTN1-202ENST00000377298 LMOD3Q0VAK6 560 aa22.76■■□□□ 1.23
CLSTN1-202ENST00000377298 EVC2Q86UK5 1308 aa22.76■■□□□ 1.23
CLSTN1-202ENST00000377298 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
CLSTN1-202ENST00000377298 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
CLSTN1-202ENST00000377298 STK31Q9BXU1 1019 aa22.74■■□□□ 1.23
CLSTN1-202ENST00000377298 NESP48681 1621 aa22.74■■□□□ 1.23
CLSTN1-202ENST00000377298 STAC3Q96MF2 364 aa22.74■■□□□ 1.23
CLSTN1-202ENST00000377298 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
CLSTN1-202ENST00000377298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
CLSTN1-202ENST00000377298 PDE3BQ13370 1112 aa22.73■■□□□ 1.23
CLSTN1-202ENST00000377298 ZNF644Q9H582 1327 aaPredicted RBP22.73■■□□□ 1.23
CLSTN1-202ENST00000377298 PANK3Q9H999 370 aa22.72■■□□□ 1.23
CLSTN1-202ENST00000377298 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
CLSTN1-202ENST00000377298 CCDC9Q9Y3X0 531 aaKnown RBP22.72■■□□□ 1.23
CLSTN1-202ENST00000377298 NUTM2FA1L443 756 aa22.71■■□□□ 1.23
CLSTN1-202ENST00000377298 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
CLSTN1-202ENST00000377298 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
CLSTN1-202ENST00000377298 MYBBP1AQ9BQG0 1328 aaKnown RBP22.7■■□□□ 1.22
CLSTN1-202ENST00000377298 RWDD1Q9H446 243 aaPredicted RBP22.7■■□□□ 1.22
CLSTN1-202ENST00000377298 USP47Q96K76 1375 aa22.7■■□□□ 1.22
CLSTN1-202ENST00000377298 MCCP23508 829 aa22.69■■□□□ 1.22
CLSTN1-202ENST00000377298 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
CLSTN1-202ENST00000377298 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
CLSTN1-202ENST00000377298 ITPRIPQ8IWB1 547 aa22.68■■□□□ 1.22
CLSTN1-202ENST00000377298 CGNL1Q0VF96 1302 aa22.68■■□□□ 1.22
CLSTN1-202ENST00000377298 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms