RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 ZNF777Q9ULD5 760 aaPredicted RBP20.49■□□□□ 0.87
ZKSCAN4-201ENST00000377294 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
ZKSCAN4-201ENST00000377294 HSPA5P11021 654 aaKnown RBP20.48■□□□□ 0.87
ZKSCAN4-201ENST00000377294 DNMT1P26358 1616 aaKnown RBP20.48■□□□□ 0.87
ZKSCAN4-201ENST00000377294 KIF14Q15058 1648 aa20.48■□□□□ 0.87
ZKSCAN4-201ENST00000377294 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
ZKSCAN4-201ENST00000377294 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
ZKSCAN4-201ENST00000377294 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
ZKSCAN4-201ENST00000377294 BCANQ96GW7 911 aa20.45■□□□□ 0.86
ZKSCAN4-201ENST00000377294 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
ZKSCAN4-201ENST00000377294 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
ZKSCAN4-201ENST00000377294 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
ZKSCAN4-201ENST00000377294 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
ZKSCAN4-201ENST00000377294 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
ZKSCAN4-201ENST00000377294 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
ZKSCAN4-201ENST00000377294 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
ZKSCAN4-201ENST00000377294 ROCK1Q13464 1354 aa20.39■□□□□ 0.86
ZKSCAN4-201ENST00000377294 NBPF8Q3BBV2 869 aa20.39■□□□□ 0.86
ZKSCAN4-201ENST00000377294 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
ZKSCAN4-201ENST00000377294 GPATCH8Q9UKJ3 1502 aaKnown RBP20.39■□□□□ 0.85
ZKSCAN4-201ENST00000377294 ANKRD30BQ9BXX2 1392 aa20.38■□□□□ 0.85
ZKSCAN4-201ENST00000377294 C11orf95C9JLR9 678 aaPredicted RBP20.38■□□□□ 0.85
ZKSCAN4-201ENST00000377294 NUP160Q12769 1436 aa20.36■□□□□ 0.85
ZKSCAN4-201ENST00000377294 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
ZKSCAN4-201ENST00000377294 FKBP8Q14318 412 aa20.34■□□□□ 0.85
ZKSCAN4-201ENST00000377294 RPRD2Q5VT52 1461 aaKnown RBP20.33■□□□□ 0.85
ZKSCAN4-201ENST00000377294 CARMIL2Q6F5E8 1435 aa20.33■□□□□ 0.84
ZKSCAN4-201ENST00000377294 PZPP20742 1482 aa20.33■□□□□ 0.84
ZKSCAN4-201ENST00000377294 TEX14Q8IWB6 1497 aa20.33■□□□□ 0.84
ZKSCAN4-201ENST00000377294 MYT1Q01538 1121 aa20.31■□□□□ 0.84
ZKSCAN4-201ENST00000377294 ITSN2Q9NZM3 1697 aa20.31■□□□□ 0.84
ZKSCAN4-201ENST00000377294 NCOA1Q15788 1441 aa20.31■□□□□ 0.84
ZKSCAN4-201ENST00000377294 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
ZKSCAN4-201ENST00000377294 ADCY10Q96PN6 1610 aa20.29■□□□□ 0.84
ZKSCAN4-201ENST00000377294 ATP10BO94823 1461 aa20.27■□□□□ 0.84
ZKSCAN4-201ENST00000377294 ADGBQ8N7X0 1667 aa20.27■□□□□ 0.84
ZKSCAN4-201ENST00000377294 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
ZKSCAN4-201ENST00000377294 CROCC2H7BZ55 1655 aa20.27■□□□□ 0.84
ZKSCAN4-201ENST00000377294 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.84
ZKSCAN4-201ENST00000377294 ABCA8O94911 1581 aa20.26■□□□□ 0.83
ZKSCAN4-201ENST00000377294 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
ZKSCAN4-201ENST00000377294 PKD2Q13563 968 aa20.24■□□□□ 0.83
ZKSCAN4-201ENST00000377294 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
ZKSCAN4-201ENST00000377294 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
ZKSCAN4-201ENST00000377294 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
ZKSCAN4-201ENST00000377294 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
ZKSCAN4-201ENST00000377294 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
ZKSCAN4-201ENST00000377294 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
ZKSCAN4-201ENST00000377294 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
ZKSCAN4-201ENST00000377294 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
ZKSCAN4-201ENST00000377294 ANKRD30AQ9BXX3 1397 aa20.2■□□□□ 0.82
ZKSCAN4-201ENST00000377294 ANKRD50Q9ULJ7 1429 aa20.19■□□□□ 0.82
ZKSCAN4-201ENST00000377294 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
ZKSCAN4-201ENST00000377294 C9orf84Q5VXU9 1444 aa20.17■□□□□ 0.82
ZKSCAN4-201ENST00000377294 KIAA1107Q9UPP5 1409 aa20.17■□□□□ 0.82
ZKSCAN4-201ENST00000377294 POLR3GLQ9BT43 218 aa20.17■□□□□ 0.82
ZKSCAN4-201ENST00000377294 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
ZKSCAN4-201ENST00000377294 NUP155O75694 1391 aa20.15■□□□□ 0.82
ZKSCAN4-201ENST00000377294 IRX6P78412 446 aaPredicted RBP20.15■□□□□ 0.82
ZKSCAN4-201ENST00000377294 PTPRGP23470 1445 aa20.14■□□□□ 0.81
ZKSCAN4-201ENST00000377294 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
ZKSCAN4-201ENST00000377294 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
ZKSCAN4-201ENST00000377294 CHD1O14646 1710 aa20.12■□□□□ 0.81
ZKSCAN4-201ENST00000377294 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
ZKSCAN4-201ENST00000377294 NEFLP07196 543 aa20.12■□□□□ 0.81
ZKSCAN4-201ENST00000377294 BCORL1Q5H9F3 1711 aa20.1■□□□□ 0.81
ZKSCAN4-201ENST00000377294 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
ZKSCAN4-201ENST00000377294 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
ZKSCAN4-201ENST00000377294 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
ZKSCAN4-201ENST00000377294 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
ZKSCAN4-201ENST00000377294 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
ZKSCAN4-201ENST00000377294 MRS2Q9HD23 443 aa20.08■□□□□ 0.8
ZKSCAN4-201ENST00000377294 USP47Q96K76 1375 aa20.08■□□□□ 0.8
ZKSCAN4-201ENST00000377294 SAMD9LQ8IVG5 1584 aa20.07■□□□□ 0.8
ZKSCAN4-201ENST00000377294 CDC42BPBQ9Y5S2 1711 aa20.07■□□□□ 0.8
ZKSCAN4-201ENST00000377294 SENP3-EIF4A1A0A087X0R7 540 aa20.06■□□□□ 0.8
ZKSCAN4-201ENST00000377294 SHANK2Q9UPX8 1470 aa20.06■□□□□ 0.8
ZKSCAN4-201ENST00000377294 POLR1AO95602 1720 aaPredicted RBP20.05■□□□□ 0.8
ZKSCAN4-201ENST00000377294 TTC37Q6PGP7 1564 aa20.03■□□□□ 0.8
ZKSCAN4-201ENST00000377294 KDM5CP41229 1560 aa20.01■□□□□ 0.79
ZKSCAN4-201ENST00000377294 PREX2Q70Z35 1606 aa20.01■□□□□ 0.79
ZKSCAN4-201ENST00000377294 SYCP2Q9BX26 1530 aa20■□□□□ 0.79
ZKSCAN4-201ENST00000377294 DCAF11Q8TEB1 546 aa19.99■□□□□ 0.79
ZKSCAN4-201ENST00000377294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
ZKSCAN4-201ENST00000377294 CCDC141Q6ZP82 1450 aa19.99■□□□□ 0.79
ZKSCAN4-201ENST00000377294 ARHGEF5Q12774 1597 aa19.98■□□□□ 0.79
ZKSCAN4-201ENST00000377294 DHX29Q7Z478 1369 aaKnown RBP19.98■□□□□ 0.79
ZKSCAN4-201ENST00000377294 CARD11Q9BXL7 1154 aa19.98■□□□□ 0.79
ZKSCAN4-201ENST00000377294 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
ZKSCAN4-201ENST00000377294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.96■□□□□ 0.79
ZKSCAN4-201ENST00000377294 KDM5DQ9BY66 1539 aa19.96■□□□□ 0.79
ZKSCAN4-201ENST00000377294 FAM135AQ9P2D6 1515 aa19.95■□□□□ 0.78
ZKSCAN4-201ENST00000377294 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
ZKSCAN4-201ENST00000377294 RALGAPBQ86X10 1494 aa19.94■□□□□ 0.78
ZKSCAN4-201ENST00000377294 ST20-MTHFSA0A0A6YYL1 179 aa19.93■□□□□ 0.78
ZKSCAN4-201ENST00000377294 UHRF1BP1Q6BDS2 1440 aa19.92■□□□□ 0.78
ZKSCAN4-201ENST00000377294 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
ZKSCAN4-201ENST00000377294 ARHGEF12Q9NZN5 1544 aa19.88■□□□□ 0.77
ZKSCAN4-201ENST00000377294 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
ZKSCAN4-201ENST00000377294 ABCC2Q92887 1545 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms