RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
SYNDIG1-201ENST00000376862 KIF7Q2M1P5 1343 aa29.69■■■□□ 2.34
SYNDIG1-201ENST00000376862 NPM2Q86SE8 214 aaKnown RBP29.68■■■□□ 2.34
SYNDIG1-201ENST00000376862 TDRD9Q8NDG6 1382 aaKnown RBP29.67■■■□□ 2.34
SYNDIG1-201ENST00000376862 LRRIQ1Q96JM4 1722 aa29.67■■■□□ 2.34
SYNDIG1-201ENST00000376862 CHIC2Q9UKJ5 165 aa29.66■■■□□ 2.34
SYNDIG1-201ENST00000376862 SENP3-EIF4A1A0A087X0R7 540 aa29.66■■■□□ 2.34
SYNDIG1-201ENST00000376862 LAS1LQ9Y4W2 734 aaKnown RBP29.65■■■□□ 2.34
SYNDIG1-201ENST00000376862 CUL7Q14999 1698 aa29.65■■■□□ 2.34
SYNDIG1-201ENST00000376862 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
SYNDIG1-201ENST00000376862 KIF21AQ7Z4S6 1674 aa29.64■■■□□ 2.34
SYNDIG1-201ENST00000376862 POLR1AO95602 1720 aaPredicted RBP29.64■■■□□ 2.34
SYNDIG1-201ENST00000376862 CNGB1Q14028 1251 aaPredicted RBP29.64■■■□□ 2.34
SYNDIG1-201ENST00000376862 KDM6BO15054 1643 aa29.64■■■□□ 2.34
SYNDIG1-201ENST00000376862 GCC2Q8IWJ2 1684 aa29.63■■■□□ 2.33
SYNDIG1-201ENST00000376862 NBPF8Q3BBV2 869 aa29.63■■■□□ 2.33
SYNDIG1-201ENST00000376862 NEFMP07197 916 aa29.63■■■□□ 2.33
SYNDIG1-201ENST00000376862 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.62■■■□□ 2.33
SYNDIG1-201ENST00000376862 FOXD1Q16676 465 aa29.62■■■□□ 2.33
SYNDIG1-201ENST00000376862 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
SYNDIG1-201ENST00000376862 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
SYNDIG1-201ENST00000376862 MPHOSPH9Q99550 1183 aa29.59■■■□□ 2.33
SYNDIG1-201ENST00000376862 SPATA31E1Q6ZUB1 1445 aa29.56■■■□□ 2.32
SYNDIG1-201ENST00000376862 GAPVD1Q14C86 1478 aa29.54■■■□□ 2.32
SYNDIG1-201ENST00000376862 USP35Q9P2H5 1018 aa29.53■■■□□ 2.32
SYNDIG1-201ENST00000376862 DHX29Q7Z478 1369 aaKnown RBP29.53■■■□□ 2.32
SYNDIG1-201ENST00000376862 WASHC2CQ9Y4E1 1318 aa29.51■■■□□ 2.32
SYNDIG1-201ENST00000376862 EHBP1L1Q8N3D4 1523 aa29.49■■■□□ 2.31
SYNDIG1-201ENST00000376862 UGGT2Q9NYU1 1516 aa29.49■■■□□ 2.31
SYNDIG1-201ENST00000376862 PDE4AP27815 886 aa29.48■■■□□ 2.31
SYNDIG1-201ENST00000376862 TCERG1O14776 1098 aaKnown RBP29.47■■■□□ 2.31
SYNDIG1-201ENST00000376862 TEX14Q8IWB6 1497 aa29.47■■■□□ 2.31
SYNDIG1-201ENST00000376862 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
SYNDIG1-201ENST00000376862 RPRD2Q5VT52 1461 aaKnown RBP29.45■■■□□ 2.3
SYNDIG1-201ENST00000376862 EXOC6Q8TAG9 804 aa29.44■■■□□ 2.3
SYNDIG1-201ENST00000376862 POLR3GLQ9BT43 218 aa29.43■■■□□ 2.3
SYNDIG1-201ENST00000376862 TCOF1Q13428 1488 aaKnown RBP29.43■■■□□ 2.3
SYNDIG1-201ENST00000376862 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
SYNDIG1-201ENST00000376862 BACH2Q9BYV9 841 aa29.42■■■□□ 2.3
SYNDIG1-201ENST00000376862 PPM1GO15355 546 aaPredicted RBP29.41■■■□□ 2.3
SYNDIG1-201ENST00000376862 ANKRD30BQ9BXX2 1392 aa29.41■■■□□ 2.3
SYNDIG1-201ENST00000376862 MAGI3Q5TCQ9 1506 aa29.41■■■□□ 2.3
SYNDIG1-201ENST00000376862 PNISRQ8TF01 805 aaKnown RBP29.41■■■□□ 2.3
SYNDIG1-201ENST00000376862 RRP1P56182 461 aaKnown RBP29.4■■■□□ 2.3
SYNDIG1-201ENST00000376862 TARBP1Q13395 1621 aaKnown RBP29.39■■■□□ 2.3
SYNDIG1-201ENST00000376862 BRPF3Q9ULD4 1205 aa29.39■■■□□ 2.3
SYNDIG1-201ENST00000376862 SAMD9Q5K651 1589 aa29.38■■■□□ 2.29
SYNDIG1-201ENST00000376862 BCORL1Q5H9F3 1711 aa29.37■■■□□ 2.29
SYNDIG1-201ENST00000376862 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
SYNDIG1-201ENST00000376862 TMC1Q8TDI8 760 aa29.34■■■□□ 2.29
SYNDIG1-201ENST00000376862 MIA2Q96PC5 1412 aa29.32■■■□□ 2.28
SYNDIG1-201ENST00000376862 MS4A1P11836 297 aa29.31■■■□□ 2.28
SYNDIG1-201ENST00000376862 UBE2Q2Q8WVN8 375 aa29.29■■■□□ 2.28
SYNDIG1-201ENST00000376862 GSE1Q14687 1217 aa29.28■■■□□ 2.28
SYNDIG1-201ENST00000376862 MRC2Q9UBG0 1479 aa29.27■■■□□ 2.28
SYNDIG1-201ENST00000376862 RCAN3Q9UKA8 241 aa29.26■■■□□ 2.27
SYNDIG1-201ENST00000376862 USP47Q96K76 1375 aa29.25■■■□□ 2.27
SYNDIG1-201ENST00000376862 LRPPRCP42704 1394 aaKnown RBP29.24■■■□□ 2.27
SYNDIG1-201ENST00000376862 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
SYNDIG1-201ENST00000376862 SKAP1Q86WV1 359 aa29.21■■■□□ 2.27
SYNDIG1-201ENST00000376862 SLC4A1APQ9BWU0 796 aaKnown RBP29.21■■■□□ 2.27
SYNDIG1-201ENST00000376862 NFKBIBQ15653 356 aa29.2■■■□□ 2.26
SYNDIG1-201ENST00000376862 DDRGK1Q96HY6 314 aa29.2■■■□□ 2.26
SYNDIG1-201ENST00000376862 ZNF326Q5BKZ1 582 aaKnown RBP29.18■■■□□ 2.26
SYNDIG1-201ENST00000376862 FRAT1Q92837 279 aaPredicted RBP29.17■■■□□ 2.26
SYNDIG1-201ENST00000376862 MBD5Q9P267 1494 aa29.15■■■□□ 2.26
SYNDIG1-201ENST00000376862 KDM5CP41229 1560 aa29.15■■■□□ 2.26
SYNDIG1-201ENST00000376862 EIF5BO60841 1220 aaKnown RBP29.14■■■□□ 2.25
SYNDIG1-201ENST00000376862 SLC4A3P48751 1232 aa29.14■■■□□ 2.25
SYNDIG1-201ENST00000376862 ARID4BQ4LE39 1312 aaPredicted RBP29.12■■■□□ 2.25
SYNDIG1-201ENST00000376862 BRD4O60885 1362 aaPredicted RBP29.11■■■□□ 2.25
SYNDIG1-201ENST00000376862 KIF15Q9NS87 1388 aa29.11■■■□□ 2.25
SYNDIG1-201ENST00000376862 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
SYNDIG1-201ENST00000376862 ADAMTS12P58397 1594 aa29.1■■■□□ 2.25
SYNDIG1-201ENST00000376862 MYBBP1AQ9BQG0 1328 aaKnown RBP29.1■■■□□ 2.25
SYNDIG1-201ENST00000376862 DAPK1P53355 1430 aa29.09■■■□□ 2.25
SYNDIG1-201ENST00000376862 ROCK1Q13464 1354 aa29.09■■■□□ 2.25
SYNDIG1-201ENST00000376862 KIF14Q15058 1648 aa29.08■■■□□ 2.25
SYNDIG1-201ENST00000376862 ROCK2O75116 1388 aaKnown RBP29.08■■■□□ 2.25
SYNDIG1-201ENST00000376862 PLIN1O60240 522 aa29.08■■■□□ 2.24
SYNDIG1-201ENST00000376862 IQGAP2Q13576 1575 aa29.05■■■□□ 2.24
SYNDIG1-201ENST00000376862 EPRSP07814 1512 aaKnown RBP29.04■■■□□ 2.24
SYNDIG1-201ENST00000376862 CDK13Q14004 1512 aaKnown RBP29.04■■■□□ 2.24
SYNDIG1-201ENST00000376862 CDCA7LQ96GN5 454 aa29.04■■■□□ 2.24
SYNDIG1-201ENST00000376862 PZPP20742 1482 aa29.03■■■□□ 2.24
SYNDIG1-201ENST00000376862 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
SYNDIG1-201ENST00000376862 CRBNQ96SW2 442 aa29.02■■■□□ 2.24
SYNDIG1-201ENST00000376862 ABCC5O15440 1437 aa29.02■■■□□ 2.24
SYNDIG1-201ENST00000376862 WDR62O43379 1518 aa29.02■■■□□ 2.24
SYNDIG1-201ENST00000376862 ARID3CA6NKF2 412 aa29.02■■■□□ 2.24
SYNDIG1-201ENST00000376862 PDE3BQ13370 1112 aa29.01■■■□□ 2.23
SYNDIG1-201ENST00000376862 RALBP1Q15311 655 aa29.01■■■□□ 2.23
SYNDIG1-201ENST00000376862 DNMT1P26358 1616 aaKnown RBP29.01■■■□□ 2.23
SYNDIG1-201ENST00000376862 DAXXQ9UER7 740 aaPredicted RBP28.98■■■□□ 2.23
SYNDIG1-201ENST00000376862 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
SYNDIG1-201ENST00000376862 ZNF644Q9H582 1327 aaPredicted RBP28.96■■■□□ 2.23
SYNDIG1-201ENST00000376862 KTN1Q86UP2 1357 aaKnown RBP28.96■■■□□ 2.23
SYNDIG1-201ENST00000376862 CARD11Q9BXL7 1154 aa28.93■■■□□ 2.22
SYNDIG1-201ENST00000376862 FRAT2O75474 233 aaPredicted RBP28.92■■■□□ 2.22
SYNDIG1-201ENST00000376862 E9PCH4 1651 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms