RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
DDR1-227ENST00000376570 NBR1Q14596 966 aa15.78■□□□□ 0.12
DDR1-227ENST00000376570 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
DDR1-227ENST00000376570 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
DDR1-227ENST00000376570 MLECQ14165 292 aa15.75■□□□□ 0.11
DDR1-227ENST00000376570 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
DDR1-227ENST00000376570 AFAP1Q8N556 730 aa15.7■□□□□ 0.1
DDR1-227ENST00000376570 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
DDR1-227ENST00000376570 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
DDR1-227ENST00000376570 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
DDR1-227ENST00000376570 NBPF1Q3BBV0 1214 aa15.7■□□□□ 0.1
DDR1-227ENST00000376570 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
DDR1-227ENST00000376570 KIF3BO15066 747 aa15.69■□□□□ 0.1
DDR1-227ENST00000376570 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
DDR1-227ENST00000376570 PLB1Q6P1J6 1458 aa15.69■□□□□ 0.1
DDR1-227ENST00000376570 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
DDR1-227ENST00000376570 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
DDR1-227ENST00000376570 NAIPQ13075 1403 aa15.68■□□□□ 0.1
DDR1-227ENST00000376570 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
DDR1-227ENST00000376570 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
DDR1-227ENST00000376570 PTPRGP23470 1445 aa15.67■□□□□ 0.1
DDR1-227ENST00000376570 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
DDR1-227ENST00000376570 STK26Q9P289 416 aa15.67■□□□□ 0.1
DDR1-227ENST00000376570 UACAQ9BZF9 1416 aa15.66■□□□□ 0.1
DDR1-227ENST00000376570 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
DDR1-227ENST00000376570 PPM1GO15355 546 aaPredicted RBP15.65■□□□□ 0.1
DDR1-227ENST00000376570 SLC24A1O60721 1099 aa15.65■□□□□ 0.1
DDR1-227ENST00000376570 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
DDR1-227ENST00000376570 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
DDR1-227ENST00000376570 PLIN1O60240 522 aa15.64■□□□□ 0.09
DDR1-227ENST00000376570 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
DDR1-227ENST00000376570 WDR43Q15061 677 aaKnown RBP eCLIP15.63■□□□□ 0.09
DDR1-227ENST00000376570 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
DDR1-227ENST00000376570 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
DDR1-227ENST00000376570 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
DDR1-227ENST00000376570 USP47Q96K76 1375 aa15.6■□□□□ 0.09
DDR1-227ENST00000376570 DAXXQ9UER7 740 aaPredicted RBP15.59■□□□□ 0.09
DDR1-227ENST00000376570 EPRSP07814 1512 aaKnown RBP15.59■□□□□ 0.09
DDR1-227ENST00000376570 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.08
DDR1-227ENST00000376570 SOX12O15370 315 aa15.58■□□□□ 0.08
DDR1-227ENST00000376570 PANK3Q9H999 370 aa15.57■□□□□ 0.08
DDR1-227ENST00000376570 HFM1A2PYH4 1435 aa15.57■□□□□ 0.08
DDR1-227ENST00000376570 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
DDR1-227ENST00000376570 KIF15Q9NS87 1388 aa15.56■□□□□ 0.08
DDR1-227ENST00000376570 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
DDR1-227ENST00000376570 TRAK1Q9UPV9 953 aa15.56■□□□□ 0.08
DDR1-227ENST00000376570 CCDC7Q96M83 1385 aa15.55■□□□□ 0.08
DDR1-227ENST00000376570 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
DDR1-227ENST00000376570 SKAP1Q86WV1 359 aa15.54■□□□□ 0.08
DDR1-227ENST00000376570 SPAG9O60271 1321 aaKnown RBP15.54■□□□□ 0.08
DDR1-227ENST00000376570 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
DDR1-227ENST00000376570 ANKRD50Q9ULJ7 1429 aa15.54■□□□□ 0.08
DDR1-227ENST00000376570 RGS3P49796 1198 aa15.53■□□□□ 0.08
DDR1-227ENST00000376570 NUTM2FA1L443 756 aa15.53■□□□□ 0.08
DDR1-227ENST00000376570 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
DDR1-227ENST00000376570 CDCA7LQ96GN5 454 aa15.52■□□□□ 0.08
DDR1-227ENST00000376570 ARHGEF11O15085 1522 aa15.52■□□□□ 0.08
DDR1-227ENST00000376570 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.07
DDR1-227ENST00000376570 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.07
DDR1-227ENST00000376570 TMEM132EQ6IEE7 984 aa15.51■□□□□ 0.07
DDR1-227ENST00000376570 TMF1P82094 1093 aa15.5■□□□□ 0.07
DDR1-227ENST00000376570 ARXQ96QS3 562 aa15.49■□□□□ 0.07
DDR1-227ENST00000376570 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
DDR1-227ENST00000376570 ABCC5O15440 1437 aa15.49■□□□□ 0.07
DDR1-227ENST00000376570 DAPK1P53355 1430 aa15.49■□□□□ 0.07
DDR1-227ENST00000376570 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
DDR1-227ENST00000376570 LAS1LQ9Y4W2 734 aaKnown RBP15.48■□□□□ 0.07
DDR1-227ENST00000376570 ESF1Q9H501 851 aaKnown RBP15.47■□□□□ 0.07
DDR1-227ENST00000376570 ARID4BQ4LE39 1312 aaPredicted RBP15.47■□□□□ 0.07
DDR1-227ENST00000376570 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
DDR1-227ENST00000376570 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
DDR1-227ENST00000376570 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.07
DDR1-227ENST00000376570 IQGAP2Q13576 1575 aa15.46■□□□□ 0.06
DDR1-227ENST00000376570 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
DDR1-227ENST00000376570 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
DDR1-227ENST00000376570 BCL2L13Q9BXK5 485 aa15.45■□□□□ 0.06
DDR1-227ENST00000376570 CFAP70Q5T0N1 1121 aa15.44■□□□□ 0.06
DDR1-227ENST00000376570 PTPN23Q9H3S7 1636 aa15.44■□□□□ 0.06
DDR1-227ENST00000376570 ZBTB7CA1YPR0 619 aa15.44■□□□□ 0.06
DDR1-227ENST00000376570 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
DDR1-227ENST00000376570 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
DDR1-227ENST00000376570 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
DDR1-227ENST00000376570 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
DDR1-227ENST00000376570 SRPK2P78362 688 aaKnown RBP15.42■□□□□ 0.06
DDR1-227ENST00000376570 MAGI3Q5TCQ9 1506 aa15.42■□□□□ 0.06
DDR1-227ENST00000376570 ANKRD30BQ9BXX2 1392 aa15.41■□□□□ 0.06
DDR1-227ENST00000376570 EHBP1L1Q8N3D4 1523 aa15.41■□□□□ 0.06
DDR1-227ENST00000376570 RAPGEF3O95398 923 aa15.41■□□□□ 0.06
DDR1-227ENST00000376570 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
DDR1-227ENST00000376570 CLUAP1Q96AJ1 413 aa15.41■□□□□ 0.06
DDR1-227ENST00000376570 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
DDR1-227ENST00000376570 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
DDR1-227ENST00000376570 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
DDR1-227ENST00000376570 POGKQ9P215 609 aa15.4■□□□□ 0.06
DDR1-227ENST00000376570 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
DDR1-227ENST00000376570 SUPT6HQ7KZ85 1726 aaKnown RBP15.39■□□□□ 0.05
DDR1-227ENST00000376570 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
DDR1-227ENST00000376570 CNTLNQ9NXG0 1405 aa15.39■□□□□ 0.05
DDR1-227ENST00000376570 WASHC2CQ9Y4E1 1318 aa15.39■□□□□ 0.05
DDR1-227ENST00000376570 DEKP35659 375 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms