RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
DDR1-226ENST00000376569 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
DDR1-226ENST00000376569 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
DDR1-226ENST00000376569 NBR1Q14596 966 aa17.09■□□□□ 0.33
DDR1-226ENST00000376569 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
DDR1-226ENST00000376569 NAIPQ13075 1403 aa17.09■□□□□ 0.33
DDR1-226ENST00000376569 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
DDR1-226ENST00000376569 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
DDR1-226ENST00000376569 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
DDR1-226ENST00000376569 CARMIL2Q6F5E8 1435 aa17.02■□□□□ 0.31
DDR1-226ENST00000376569 NUTM2DQ5VT03 806 aaPredicted RBP17.02■□□□□ 0.31
DDR1-226ENST00000376569 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
DDR1-226ENST00000376569 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
DDR1-226ENST00000376569 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
DDR1-226ENST00000376569 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
DDR1-226ENST00000376569 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDR1-226ENST00000376569 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
DDR1-226ENST00000376569 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
DDR1-226ENST00000376569 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
DDR1-226ENST00000376569 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
DDR1-226ENST00000376569 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
DDR1-226ENST00000376569 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
DDR1-226ENST00000376569 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
DDR1-226ENST00000376569 USP47Q96K76 1375 aa16.96■□□□□ 0.31
DDR1-226ENST00000376569 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
DDR1-226ENST00000376569 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
DDR1-226ENST00000376569 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.31
DDR1-226ENST00000376569 GGT6Q6P531 493 aa16.96■□□□□ 0.3
DDR1-226ENST00000376569 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
DDR1-226ENST00000376569 ANP32EQ9BTT0 268 aa16.95■□□□□ 0.3
DDR1-226ENST00000376569 PTPRGP23470 1445 aa16.94■□□□□ 0.3
DDR1-226ENST00000376569 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
DDR1-226ENST00000376569 KNSTRNQ9Y448 316 aa16.92■□□□□ 0.3
DDR1-226ENST00000376569 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
DDR1-226ENST00000376569 KIF3BO15066 747 aa16.91■□□□□ 0.3
DDR1-226ENST00000376569 PLIN1O60240 522 aa16.91■□□□□ 0.3
DDR1-226ENST00000376569 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
DDR1-226ENST00000376569 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.3
DDR1-226ENST00000376569 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
DDR1-226ENST00000376569 ANKRD50Q9ULJ7 1429 aa16.88■□□□□ 0.29
DDR1-226ENST00000376569 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
DDR1-226ENST00000376569 PANK3Q9H999 370 aa16.87■□□□□ 0.29
DDR1-226ENST00000376569 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
DDR1-226ENST00000376569 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
DDR1-226ENST00000376569 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
DDR1-226ENST00000376569 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
DDR1-226ENST00000376569 DAPK1P53355 1430 aa16.85■□□□□ 0.29
DDR1-226ENST00000376569 PTPN23Q9H3S7 1636 aa16.84■□□□□ 0.29
DDR1-226ENST00000376569 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
DDR1-226ENST00000376569 ABCC5O15440 1437 aa16.84■□□□□ 0.29
DDR1-226ENST00000376569 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
DDR1-226ENST00000376569 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
DDR1-226ENST00000376569 TMF1P82094 1093 aa16.83■□□□□ 0.29
DDR1-226ENST00000376569 STK26Q9P289 416 aa16.83■□□□□ 0.28
DDR1-226ENST00000376569 IQGAP2Q13576 1575 aa16.83■□□□□ 0.28
DDR1-226ENST00000376569 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
DDR1-226ENST00000376569 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
DDR1-226ENST00000376569 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
DDR1-226ENST00000376569 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
DDR1-226ENST00000376569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
DDR1-226ENST00000376569 MLECQ14165 292 aa16.81■□□□□ 0.28
DDR1-226ENST00000376569 RGS3P49796 1198 aa16.81■□□□□ 0.28
DDR1-226ENST00000376569 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
DDR1-226ENST00000376569 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
DDR1-226ENST00000376569 SPAG9O60271 1321 aaKnown RBP16.8■□□□□ 0.28
DDR1-226ENST00000376569 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
DDR1-226ENST00000376569 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
DDR1-226ENST00000376569 CUL7Q14999 1698 aa16.79■□□□□ 0.28
DDR1-226ENST00000376569 CCDC144AA2RUR9 1427 aa16.78■□□□□ 0.28
DDR1-226ENST00000376569 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
DDR1-226ENST00000376569 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
DDR1-226ENST00000376569 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
DDR1-226ENST00000376569 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
DDR1-226ENST00000376569 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
DDR1-226ENST00000376569 AKNAQ7Z591 1439 aa16.77■□□□□ 0.28
DDR1-226ENST00000376569 RCAN3Q9UKA8 241 aa16.77■□□□□ 0.28
DDR1-226ENST00000376569 TRAK1Q9UPV9 953 aa16.77■□□□□ 0.28
DDR1-226ENST00000376569 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
DDR1-226ENST00000376569 SKAP1Q86WV1 359 aa16.76■□□□□ 0.27
DDR1-226ENST00000376569 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
DDR1-226ENST00000376569 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
DDR1-226ENST00000376569 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
DDR1-226ENST00000376569 ZBED9Q6R2W3 1325 aa16.75■□□□□ 0.27
DDR1-226ENST00000376569 SLC24A1O60721 1099 aa16.75■□□□□ 0.27
DDR1-226ENST00000376569 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
DDR1-226ENST00000376569 MIA2Q96PC5 1412 aa16.74■□□□□ 0.27
DDR1-226ENST00000376569 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
DDR1-226ENST00000376569 HECW1Q76N89 1606 aa16.73■□□□□ 0.27
DDR1-226ENST00000376569 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
DDR1-226ENST00000376569 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
DDR1-226ENST00000376569 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
DDR1-226ENST00000376569 NLRP13Q86W25 1043 aa16.72■□□□□ 0.27
DDR1-226ENST00000376569 NCOA1Q15788 1441 aa16.71■□□□□ 0.26
DDR1-226ENST00000376569 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
DDR1-226ENST00000376569 NUP153P49790 1475 aaKnown RBP16.69■□□□□ 0.26
DDR1-226ENST00000376569 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
DDR1-226ENST00000376569 ARXQ96QS3 562 aa16.69■□□□□ 0.26
DDR1-226ENST00000376569 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
DDR1-226ENST00000376569 RALBP1Q15311 655 aa16.68■□□□□ 0.26
DDR1-226ENST00000376569 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms