RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
TNXB-201ENST00000375244 TMF1P82094 1093 aa13.43□□□□□ -0.26
TNXB-201ENST00000375244 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
TNXB-201ENST00000375244 CCDC34Q96HJ3 373 aa13.43□□□□□ -0.26
TNXB-201ENST00000375244 IPO8O15397 1037 aaKnown RBP13.42□□□□□ -0.26
TNXB-201ENST00000375244 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
TNXB-201ENST00000375244 KANK1Q14678 1352 aa13.42□□□□□ -0.26
TNXB-201ENST00000375244 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
TNXB-201ENST00000375244 APBB1O00213 710 aa13.39□□□□□ -0.27
TNXB-201ENST00000375244 SLKQ9H2G2 1235 aaPredicted RBP13.38□□□□□ -0.27
TNXB-201ENST00000375244 PHF14O94880 888 aa13.38□□□□□ -0.27
TNXB-201ENST00000375244 MORC1Q86VD1 984 aa13.37□□□□□ -0.27
TNXB-201ENST00000375244 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
TNXB-201ENST00000375244 SOX12O15370 315 aa13.36□□□□□ -0.27
TNXB-201ENST00000375244 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
TNXB-201ENST00000375244 PDE4CQ08493 712 aa13.36□□□□□ -0.27
TNXB-201ENST00000375244 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
TNXB-201ENST00000375244 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
TNXB-201ENST00000375244 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
TNXB-201ENST00000375244 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
TNXB-201ENST00000375244 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
TNXB-201ENST00000375244 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
TNXB-201ENST00000375244 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
TNXB-201ENST00000375244 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.27
TNXB-201ENST00000375244 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
TNXB-201ENST00000375244 SETQ01105 290 aaPredicted RBP13.33□□□□□ -0.28
TNXB-201ENST00000375244 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
TNXB-201ENST00000375244 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
TNXB-201ENST00000375244 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
TNXB-201ENST00000375244 TPM3P06753 285 aa13.32□□□□□ -0.28
TNXB-201ENST00000375244 TMX4Q9H1E5 349 aaPredicted RBP13.32□□□□□ -0.28
TNXB-201ENST00000375244 RWDD1Q9H446 243 aaPredicted RBP13.31□□□□□ -0.28
TNXB-201ENST00000375244 HDGFP51858 240 aaKnown RBP13.31□□□□□ -0.28
TNXB-201ENST00000375244 DCAF11Q8TEB1 546 aa13.31□□□□□ -0.28
TNXB-201ENST00000375244 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
TNXB-201ENST00000375244 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
TNXB-201ENST00000375244 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
TNXB-201ENST00000375244 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
TNXB-201ENST00000375244 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
TNXB-201ENST00000375244 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
TNXB-201ENST00000375244 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
TNXB-201ENST00000375244 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
TNXB-201ENST00000375244 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
TNXB-201ENST00000375244 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
TNXB-201ENST00000375244 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
TNXB-201ENST00000375244 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
TNXB-201ENST00000375244 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.28
TNXB-201ENST00000375244 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.28
TNXB-201ENST00000375244 KIF16BQ96L93 1317 aa13.27□□□□□ -0.28
TNXB-201ENST00000375244 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.28
TNXB-201ENST00000375244 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
TNXB-201ENST00000375244 TAF7LQ5H9L4 462 aa13.26□□□□□ -0.29
TNXB-201ENST00000375244 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
TNXB-201ENST00000375244 HMMRO75330 724 aa13.26□□□□□ -0.29
TNXB-201ENST00000375244 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
TNXB-201ENST00000375244 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
TNXB-201ENST00000375244 HSP90AA2PQ14568 343 aaPredicted RBP13.26□□□□□ -0.29
TNXB-201ENST00000375244 ST18O60284 1047 aa13.26□□□□□ -0.29
TNXB-201ENST00000375244 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
TNXB-201ENST00000375244 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
TNXB-201ENST00000375244 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
TNXB-201ENST00000375244 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
TNXB-201ENST00000375244 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
TNXB-201ENST00000375244 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
TNXB-201ENST00000375244 VPS53Q5VIR6 699 aa13.24□□□□□ -0.29
TNXB-201ENST00000375244 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
TNXB-201ENST00000375244 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
TNXB-201ENST00000375244 DDX11L8A8MPP1 907 aa13.23□□□□□ -0.29
TNXB-201ENST00000375244 RALBP1Q15311 655 aa13.23□□□□□ -0.29
TNXB-201ENST00000375244 HDAC5Q9UQL6 1122 aa13.23□□□□□ -0.29
TNXB-201ENST00000375244 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
TNXB-201ENST00000375244 TNIKQ9UKE5 1360 aa13.23□□□□□ -0.29
TNXB-201ENST00000375244 TSR1Q2NL82 804 aaKnown RBP13.22□□□□□ -0.29
TNXB-201ENST00000375244 ARHGAP35Q9NRY4 1499 aa13.21□□□□□ -0.29
TNXB-201ENST00000375244 PES1O00541 588 aaKnown RBP13.21□□□□□ -0.29
TNXB-201ENST00000375244 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
TNXB-201ENST00000375244 STK26Q9P289 416 aa13.21□□□□□ -0.29
TNXB-201ENST00000375244 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
TNXB-201ENST00000375244 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.3
TNXB-201ENST00000375244 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
TNXB-201ENST00000375244 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
TNXB-201ENST00000375244 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
TNXB-201ENST00000375244 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
TNXB-201ENST00000375244 H3BQV1 296 aa13.2□□□□□ -0.3
TNXB-201ENST00000375244 MARCH6O60337 910 aa13.2□□□□□ -0.3
TNXB-201ENST00000375244 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
TNXB-201ENST00000375244 NOL8Q76FK4 1167 aaKnown RBP13.19□□□□□ -0.3
TNXB-201ENST00000375244 TPM1P09493 284 aa13.19□□□□□ -0.3
TNXB-201ENST00000375244 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
TNXB-201ENST00000375244 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
TNXB-201ENST00000375244 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
TNXB-201ENST00000375244 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
TNXB-201ENST00000375244 G3V3G9 751 aa13.18□□□□□ -0.3
TNXB-201ENST00000375244 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
TNXB-201ENST00000375244 TPM2P07951 284 aa13.18□□□□□ -0.3
TNXB-201ENST00000375244 GPS2Q13227 327 aa13.17□□□□□ -0.3
TNXB-201ENST00000375244 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
TNXB-201ENST00000375244 PATL2C9JE40 543 aaKnown RBP13.17□□□□□ -0.3
TNXB-201ENST00000375244 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
TNXB-201ENST00000375244 FOXD4L5Q5VV16 416 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms