RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 P3H3Q8IVL6 736 aa30.3■■■□□ 2.44
H2AFX-201ENST00000375167 PTPRTO14522 1441 aa30.29■■■□□ 2.44
H2AFX-201ENST00000375167 HECW1Q76N89 1606 aa30.27■■■□□ 2.44
H2AFX-201ENST00000375167 LTBP4Q8N2S1 1624 aa30.24■■■□□ 2.43
H2AFX-201ENST00000375167 SETD1BQ9UPS6 1966 aaKnown RBP30.22■■■□□ 2.43
H2AFX-201ENST00000375167 CEBPAP49715 358 aaPredicted RBP30.22■■■□□ 2.43
H2AFX-201ENST00000375167 NUP153P49790 1475 aaKnown RBP30.19■■■□□ 2.42
H2AFX-201ENST00000375167 SAMD9Q5K651 1589 aa30.18■■■□□ 2.42
H2AFX-201ENST00000375167 C9orf84Q5VXU9 1444 aa30.18■■■□□ 2.42
H2AFX-201ENST00000375167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.18■■■□□ 2.421e-6■■■■□ 20.5
H2AFX-201ENST00000375167 ATP10AO60312 1499 aa30.17■■■□□ 2.42
H2AFX-201ENST00000375167 PRXQ9BXM0 1461 aa30.17■■■□□ 2.42
H2AFX-201ENST00000375167 PLEKHD1A6NEE1 506 aa30.15■■■□□ 2.42
H2AFX-201ENST00000375167 SCAPERQ9BY12 1400 aa30.09■■■□□ 2.41
H2AFX-201ENST00000375167 C3P01024 1663 aa30.03■■■□□ 2.4
H2AFX-201ENST00000375167 UBAP1LF5GYI3 381 aa30.02■■■□□ 2.4
H2AFX-201ENST00000375167 NCOA1Q15788 1441 aa30.01■■■□□ 2.39
H2AFX-201ENST00000375167 MED1Q15648 1581 aaPredicted RBP29.96■■■□□ 2.39
H2AFX-201ENST00000375167 PLCH2O75038 1416 aa29.95■■■□□ 2.39
H2AFX-201ENST00000375167 TRAPPC8Q9Y2L5 1435 aa29.92■■■□□ 2.38
H2AFX-201ENST00000375167 ZNF518AQ6AHZ1 1483 aa29.91■■■□□ 2.38
H2AFX-201ENST00000375167 ESF1Q9H501 851 aaKnown RBP29.89■■■□□ 2.37
H2AFX-201ENST00000375167 REREQ9P2R6 1566 aa29.88■■■□□ 2.37
H2AFX-201ENST00000375167 MYO5CQ9NQX4 1742 aa29.88■■■□□ 2.37
H2AFX-201ENST00000375167 CAMSAP1Q5T5Y3 1602 aa29.87■■■□□ 2.37
H2AFX-201ENST00000375167 DIP2CQ9Y2E4 1556 aa29.86■■■□□ 2.37
H2AFX-201ENST00000375167 KDM5CP41229 1560 aa29.85■■■□□ 2.37
H2AFX-201ENST00000375167 ZNF335Q9H4Z2 1342 aaPredicted RBP29.85■■■□□ 2.37
H2AFX-201ENST00000375167 EFCAB2Q5VUJ9 269 aa29.84■■■□□ 2.37
H2AFX-201ENST00000375167 MYT1LQ9UL68 1186 aa29.82■■■□□ 2.36
H2AFX-201ENST00000375167 AGLP35573 1532 aa29.79■■■□□ 2.36
H2AFX-201ENST00000375167 CDK13Q14004 1512 aaKnown RBP29.79■■■□□ 2.36
H2AFX-201ENST00000375167 CNTLNQ9NXG0 1405 aa29.78■■■□□ 2.36
H2AFX-201ENST00000375167 ABCA6Q8N139 1617 aa29.77■■■□□ 2.36
H2AFX-201ENST00000375167 RANGAP1P46060 587 aaPredicted RBP29.77■■■□□ 2.36
H2AFX-201ENST00000375167 SCAF1Q9H7N4 1312 aaKnown RBP29.74■■■□□ 2.35
H2AFX-201ENST00000375167 HSPA1LP34931 641 aa29.74■■■□□ 2.35
H2AFX-201ENST00000375167 PHF23Q9BUL5 403 aaPredicted RBP29.74■■■□□ 2.35
H2AFX-201ENST00000375167 NCKAP5LQ9HCH0 1330 aa29.73■■■□□ 2.35
H2AFX-201ENST00000375167 AFAP1Q8N556 730 aa29.73■■■□□ 2.35
H2AFX-201ENST00000375167 NPATQ14207 1427 aa29.73■■■□□ 2.35
H2AFX-201ENST00000375167 ARHGAP5Q13017 1502 aa29.7■■■□□ 2.35
H2AFX-201ENST00000375167 MROH2AA6NES4 1674 aa29.69■■■□□ 2.34
H2AFX-201ENST00000375167 SUPT6HQ7KZ85 1726 aaKnown RBP29.68■■■□□ 2.34
H2AFX-201ENST00000375167 PLA2R1Q13018 1463 aa29.68■■■□□ 2.34
H2AFX-201ENST00000375167 MLH3Q9UHC1 1453 aa29.68■■■□□ 2.34
H2AFX-201ENST00000375167 PKD2Q13563 968 aa29.66■■■□□ 2.34
H2AFX-201ENST00000375167 ZNF142P52746 1687 aaPredicted RBP29.66■■■□□ 2.34
H2AFX-201ENST00000375167 PIP4K2BP78356 416 aa29.64■■■□□ 2.34
H2AFX-201ENST00000375167 KIF14Q15058 1648 aa29.64■■■□□ 2.34
H2AFX-201ENST00000375167 MYO3AQ8NEV4 1616 aa29.61■■■□□ 2.33
H2AFX-201ENST00000375167 TCOF1Q13428 1488 aaKnown RBP29.61■■■□□ 2.33
H2AFX-201ENST00000375167 TOM1O60784 492 aa29.6■■■□□ 2.33
H2AFX-201ENST00000375167 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
H2AFX-201ENST00000375167 PPP6R1Q9UPN7 881 aa29.58■■■□□ 2.33
H2AFX-201ENST00000375167 CEP170BQ9Y4F5 1589 aaPredicted RBP29.58■■■□□ 2.33
H2AFX-201ENST00000375167 CDK11AQ9UQ88 783 aaPredicted RBP29.54■■■□□ 2.32
H2AFX-201ENST00000375167 ZMYM3Q14202 1370 aa29.54■■■□□ 2.32
H2AFX-201ENST00000375167 CPS1P31327 1500 aa29.53■■■□□ 2.32
H2AFX-201ENST00000375167 KIDINS220Q9ULH0 1771 aa29.51■■■□□ 2.32
H2AFX-201ENST00000375167 ITSN2Q9NZM3 1697 aa29.5■■■□□ 2.31
H2AFX-201ENST00000375167 ABCC1P33527 1531 aa29.5■■■□□ 2.31
H2AFX-201ENST00000375167 CDC42BPBQ9Y5S2 1711 aa29.49■■■□□ 2.31
H2AFX-201ENST00000375167 CLIP1P30622 1438 aa29.49■■■□□ 2.31
H2AFX-201ENST00000375167 TROQ12816 1431 aaPredicted RBP29.47■■■□□ 2.31
H2AFX-201ENST00000375167 ATP1B4Q9UN42 357 aaPredicted RBP29.47■■■□□ 2.31
H2AFX-201ENST00000375167 CLTCQ00610 1675 aaKnown RBP29.46■■■□□ 2.31
H2AFX-201ENST00000375167 PREX2Q70Z35 1606 aa29.43■■■□□ 2.3
H2AFX-201ENST00000375167 PTPRKQ15262 1439 aa29.43■■■□□ 2.3
H2AFX-201ENST00000375167 POLR1AO95602 1720 aaPredicted RBP29.41■■■□□ 2.3
H2AFX-201ENST00000375167 SHANK2Q9UPX8 1470 aa29.4■■■□□ 2.3
H2AFX-201ENST00000375167 FMN1Q68DA7 1419 aa29.39■■■□□ 2.29
H2AFX-201ENST00000375167 A2ML1A8K2U0 1454 aa29.34■■■□□ 2.29
H2AFX-201ENST00000375167 DNMT1P26358 1616 aaKnown RBP29.33■■■□□ 2.29
H2AFX-201ENST00000375167 SAMD9LQ8IVG5 1584 aa29.32■■■□□ 2.28
H2AFX-201ENST00000375167 NEURL4Q96JN8 1562 aa29.32■■■□□ 2.28
H2AFX-201ENST00000375167 ALKQ9UM73 1620 aa29.32■■■□□ 2.28
H2AFX-201ENST00000375167 EEA1Q15075 1411 aa29.3■■■□□ 2.28
H2AFX-201ENST00000375167 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.28
H2AFX-201ENST00000375167 PLXNC1O60486 1568 aa29.26■■■□□ 2.27
H2AFX-201ENST00000375167 VWDEQ8N2E2 1590 aa29.25■■■□□ 2.27
H2AFX-201ENST00000375167 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
H2AFX-201ENST00000375167 RGS17Q9UGC6 210 aaPredicted RBP29.23■■■□□ 2.27
H2AFX-201ENST00000375167 CDC42BPAQ5VT25 1732 aa29.22■■■□□ 2.27
H2AFX-201ENST00000375167 SPAG9O60271 1321 aaKnown RBP29.22■■■□□ 2.27
H2AFX-201ENST00000375167 ATP7AQ04656 1500 aa29.21■■■□□ 2.27
H2AFX-201ENST00000375167 A2MP01023 1474 aa29.19■■■□□ 2.26
H2AFX-201ENST00000375167 GGT6Q6P531 493 aa29.19■■■□□ 2.26
H2AFX-201ENST00000375167 RNF17Q9BXT8 1623 aaKnown RBP29.19■■■□□ 2.26
H2AFX-201ENST00000375167 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
H2AFX-201ENST00000375167 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
H2AFX-201ENST00000375167 ARHGAP35Q9NRY4 1499 aa29.13■■■□□ 2.25
H2AFX-201ENST00000375167 ANKLE2Q86XL3 938 aa29.13■■■□□ 2.25
H2AFX-201ENST00000375167 SYNMO15061 1565 aa29.13■■■□□ 2.25
H2AFX-201ENST00000375167 ZNF777Q9ULD5 760 aaPredicted RBP29.12■■■□□ 2.25
H2AFX-201ENST00000375167 TNRQ92752 1358 aa29.11■■■□□ 2.25
H2AFX-201ENST00000375167 NPHP4O75161 1426 aaPredicted RBP29.1■■■□□ 2.25
H2AFX-201ENST00000375167 DEPDC5O75140 1603 aa29.09■■■□□ 2.25
H2AFX-201ENST00000375167 ADGBQ8N7X0 1667 aa29.08■■■□□ 2.25
H2AFX-201ENST00000375167 LRRC7Q96NW7 1537 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms