RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
PHF1-201ENST00000374512 KDM6BO15054 1643 aa25.08■■□□□ 1.61
PHF1-201ENST00000374512 JPH4Q96JJ6 628 aa25.08■■□□□ 1.6
PHF1-201ENST00000374512 TRIM52Q96A61 297 aa25.06■■□□□ 1.6
PHF1-201ENST00000374512 DENND4BO75064 1496 aaPredicted RBP25.06■■□□□ 1.6
PHF1-201ENST00000374512 ROCK1Q13464 1354 aa25.05■■□□□ 1.6
PHF1-201ENST00000374512 DNMT1P26358 1616 aaKnown RBP25.05■■□□□ 1.6
PHF1-201ENST00000374512 DAPK1P53355 1430 aa25.05■■□□□ 1.6
PHF1-201ENST00000374512 PLB1Q6P1J6 1458 aa25.03■■□□□ 1.6
PHF1-201ENST00000374512 TROQ12816 1431 aaPredicted RBP25.01■■□□□ 1.59
PHF1-201ENST00000374512 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
PHF1-201ENST00000374512 ABCC5O15440 1437 aa24.99■■□□□ 1.59
PHF1-201ENST00000374512 EIF4G2P78344 907 aaKnown RBP eCLIP24.98■■□□□ 1.59
PHF1-201ENST00000374512 BCANQ96GW7 911 aa24.97■■□□□ 1.59
PHF1-201ENST00000374512 HSPA5P11021 654 aaKnown RBP24.97■■□□□ 1.59
PHF1-201ENST00000374512 ADCY10Q96PN6 1610 aa24.96■■□□□ 1.59
PHF1-201ENST00000374512 WASHC2AQ641Q2 1341 aa24.96■■□□□ 1.59
PHF1-201ENST00000374512 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.59
PHF1-201ENST00000374512 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
PHF1-201ENST00000374512 ABCA8O94911 1581 aa24.93■■□□□ 1.58
PHF1-201ENST00000374512 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
PHF1-201ENST00000374512 ZNF644Q9H582 1327 aaPredicted RBP24.91■■□□□ 1.58
PHF1-201ENST00000374512 RPRD2Q5VT52 1461 aaKnown RBP24.9■■□□□ 1.58
PHF1-201ENST00000374512 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
PHF1-201ENST00000374512 CAMSAP2Q08AD1 1489 aa24.88■■□□□ 1.57
PHF1-201ENST00000374512 KIF14Q15058 1648 aa24.88■■□□□ 1.57
PHF1-201ENST00000374512 NCOA1Q15788 1441 aa24.87■■□□□ 1.57
PHF1-201ENST00000374512 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
PHF1-201ENST00000374512 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
PHF1-201ENST00000374512 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
PHF1-201ENST00000374512 CHD1O14646 1710 aa24.85■■□□□ 1.57
PHF1-201ENST00000374512 ANP32EQ9BTT0 268 aa24.85■■□□□ 1.57
PHF1-201ENST00000374512 CFDP1Q9UEE9 299 aaPredicted RBP24.85■■□□□ 1.57
PHF1-201ENST00000374512 HNRNPUQ00839 825 aaKnown RBP eCLIP24.85■■□□□ 1.57
PHF1-201ENST00000374512 ERICH6BQ5W0A0 696 aa24.84■■□□□ 1.57
PHF1-201ENST00000374512 FOXD1Q16676 465 aa24.82■■□□□ 1.56
PHF1-201ENST00000374512 POLR1AO95602 1720 aaPredicted RBP24.82■■□□□ 1.56
PHF1-201ENST00000374512 CCDC7Q96M83 1385 aa24.82■■□□□ 1.56
PHF1-201ENST00000374512 ATP10BO94823 1461 aa24.82■■□□□ 1.56
PHF1-201ENST00000374512 TEX14Q8IWB6 1497 aa24.82■■□□□ 1.56
PHF1-201ENST00000374512 PLEKHD1A6NEE1 506 aa24.81■■□□□ 1.56
PHF1-201ENST00000374512 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
PHF1-201ENST00000374512 SLC4A1APQ9BWU0 796 aaKnown RBP24.8■■□□□ 1.56
PHF1-201ENST00000374512 ADGRL2O95490 1459 aa24.78■■□□□ 1.56
PHF1-201ENST00000374512 PTPRGP23470 1445 aa24.77■■□□□ 1.56
PHF1-201ENST00000374512 CDC42BPAQ5VT25 1732 aa24.76■■□□□ 1.55
PHF1-201ENST00000374512 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
PHF1-201ENST00000374512 RBM19Q9Y4C8 960 aaKnown RBP24.76■■□□□ 1.55
PHF1-201ENST00000374512 ABCC10Q5T3U5 1492 aa24.75■■□□□ 1.55
PHF1-201ENST00000374512 SHROOM2Q13796 1616 aa24.75■■□□□ 1.55
PHF1-201ENST00000374512 PRKRIP1Q9H875 184 aaPredicted RBP24.74■■□□□ 1.55
PHF1-201ENST00000374512 PZPP20742 1482 aa24.74■■□□□ 1.55
PHF1-201ENST00000374512 ZNF777Q9ULD5 760 aaPredicted RBP24.73■■□□□ 1.55
PHF1-201ENST00000374512 ANKRD30AQ9BXX3 1397 aa24.71■■□□□ 1.55
PHF1-201ENST00000374512 NBPF8Q3BBV2 869 aa24.7■■□□□ 1.54
PHF1-201ENST00000374512 C11orf95C9JLR9 678 aaPredicted RBP24.69■■□□□ 1.54
PHF1-201ENST00000374512 SHANK2Q9UPX8 1470 aa24.66■■□□□ 1.54
PHF1-201ENST00000374512 ZBED9Q6R2W3 1325 aa24.65■■□□□ 1.54
PHF1-201ENST00000374512 KIAA1107Q9UPP5 1409 aa24.65■■□□□ 1.54
PHF1-201ENST00000374512 MBD5Q9P267 1494 aa24.64■■□□□ 1.53
PHF1-201ENST00000374512 KIF7Q2M1P5 1343 aa24.64■■□□□ 1.53
PHF1-201ENST00000374512 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
PHF1-201ENST00000374512 MRS2Q9HD23 443 aa24.61■■□□□ 1.53
PHF1-201ENST00000374512 ARID4BQ4LE39 1312 aaPredicted RBP24.61■■□□□ 1.53
PHF1-201ENST00000374512 PPP4R2Q9NY27 417 aa24.59■■□□□ 1.53
PHF1-201ENST00000374512 C9orf84Q5VXU9 1444 aa24.59■■□□□ 1.53
PHF1-201ENST00000374512 CCDC184Q52MB2 194 aa24.59■■□□□ 1.53
PHF1-201ENST00000374512 ARHGEF5Q12774 1597 aa24.57■■□□□ 1.52
PHF1-201ENST00000374512 PKD2Q13563 968 aa24.56■■□□□ 1.52
PHF1-201ENST00000374512 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
PHF1-201ENST00000374512 CDC42BPBQ9Y5S2 1711 aa24.54■■□□□ 1.52
PHF1-201ENST00000374512 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
PHF1-201ENST00000374512 ABCC2Q92887 1545 aa24.54■■□□□ 1.52
PHF1-201ENST00000374512 FANCIQ9NVI1 1328 aa24.54■■□□□ 1.52
PHF1-201ENST00000374512 FAM9BQ8IZU0 186 aa24.54■■□□□ 1.52
PHF1-201ENST00000374512 TSPY4P0CV99 314 aa24.53■■□□□ 1.52
PHF1-201ENST00000374512 TSPY10P0CW01 314 aa24.53■■□□□ 1.52
PHF1-201ENST00000374512 KDM5DQ9BY66 1539 aa24.52■■□□□ 1.52
PHF1-201ENST00000374512 CLASP1Q7Z460 1538 aa24.52■■□□□ 1.52
PHF1-201ENST00000374512 UHRF1BP1Q6BDS2 1440 aa24.51■■□□□ 1.51
PHF1-201ENST00000374512 NUP155O75694 1391 aa24.5■■□□□ 1.51
PHF1-201ENST00000374512 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
PHF1-201ENST00000374512 USP47Q96K76 1375 aa24.5■■□□□ 1.51
PHF1-201ENST00000374512 ROCK2O75116 1388 aaKnown RBP24.49■■□□□ 1.51
PHF1-201ENST00000374512 DHX29Q7Z478 1369 aaKnown RBP24.49■■□□□ 1.51
PHF1-201ENST00000374512 KDM5CP41229 1560 aa24.48■■□□□ 1.51
PHF1-201ENST00000374512 ARHGEF12Q9NZN5 1544 aa24.48■■□□□ 1.51
PHF1-201ENST00000374512 IRX6P78412 446 aaPredicted RBP24.47■■□□□ 1.51
PHF1-201ENST00000374512 KIF15Q9NS87 1388 aa24.46■■□□□ 1.51
PHF1-201ENST00000374512 HNRNPMP52272 730 aaKnown RBP eCLIP24.46■■□□□ 1.51
PHF1-201ENST00000374512 RSPH4AQ5TD94 716 aa24.46■■□□□ 1.51
PHF1-201ENST00000374512 CCDC141Q6ZP82 1450 aa24.45■■□□□ 1.51
PHF1-201ENST00000374512 RALGAPBQ86X10 1494 aa24.45■■□□□ 1.5
PHF1-201ENST00000374512 BCORL1Q5H9F3 1711 aa24.45■■□□□ 1.5
PHF1-201ENST00000374512 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
PHF1-201ENST00000374512 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.44■■□□□ 1.52e-7■■■■□ 20
PHF1-201ENST00000374512 SMG6Q86US8 1419 aaKnown RBP24.44■■□□□ 1.5
PHF1-201ENST00000374512 MYO5CQ9NQX4 1742 aa24.41■■□□□ 1.5
PHF1-201ENST00000374512 UHRF1BP1LA0JNW5 1464 aa24.41■■□□□ 1.5
PHF1-201ENST00000374512 ARHGAP5Q13017 1502 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms