RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
CLIC4-201ENST00000374379 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
CLIC4-201ENST00000374379 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
CLIC4-201ENST00000374379 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
CLIC4-201ENST00000374379 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
CLIC4-201ENST00000374379 WDR43Q15061 677 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLIC4-201ENST00000374379 MYT1Q01538 1121 aa18.19■□□□□ 0.5
CLIC4-201ENST00000374379 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
CLIC4-201ENST00000374379 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
CLIC4-201ENST00000374379 GGT6Q6P531 493 aa18.17■□□□□ 0.5
CLIC4-201ENST00000374379 TNNT2P45379 298 aaPredicted RBP18.15■□□□□ 0.5
CLIC4-201ENST00000374379 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
CLIC4-201ENST00000374379 NAIPQ13075 1403 aa18.15■□□□□ 0.5
CLIC4-201ENST00000374379 HFM1A2PYH4 1435 aa18.14■□□□□ 0.5
CLIC4-201ENST00000374379 WASHC2AQ641Q2 1341 aa18.14■□□□□ 0.5
CLIC4-201ENST00000374379 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
CLIC4-201ENST00000374379 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
CLIC4-201ENST00000374379 KIF3BO15066 747 aa18.13■□□□□ 0.49
CLIC4-201ENST00000374379 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
CLIC4-201ENST00000374379 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
CLIC4-201ENST00000374379 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
CLIC4-201ENST00000374379 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
CLIC4-201ENST00000374379 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
CLIC4-201ENST00000374379 SAFB2Q14151 953 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLIC4-201ENST00000374379 CUL7Q14999 1698 aa18.08■□□□□ 0.49
CLIC4-201ENST00000374379 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.49
CLIC4-201ENST00000374379 NEUROD2Q15784 382 aa18.08■□□□□ 0.49
CLIC4-201ENST00000374379 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.48
CLIC4-201ENST00000374379 PLB1Q6P1J6 1458 aa18.08■□□□□ 0.48
CLIC4-201ENST00000374379 TMF1P82094 1093 aa18.07■□□□□ 0.48
CLIC4-201ENST00000374379 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
CLIC4-201ENST00000374379 USP47Q96K76 1375 aa18.06■□□□□ 0.48
CLIC4-201ENST00000374379 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
CLIC4-201ENST00000374379 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
CLIC4-201ENST00000374379 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
CLIC4-201ENST00000374379 KIF7Q2M1P5 1343 aa18.06■□□□□ 0.48
CLIC4-201ENST00000374379 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
CLIC4-201ENST00000374379 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
CLIC4-201ENST00000374379 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
CLIC4-201ENST00000374379 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
CLIC4-201ENST00000374379 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
CLIC4-201ENST00000374379 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
CLIC4-201ENST00000374379 MLECQ14165 292 aa18.02■□□□□ 0.48
CLIC4-201ENST00000374379 PPP4R2Q9NY27 417 aa18.02■□□□□ 0.48
CLIC4-201ENST00000374379 SUPT6HQ7KZ85 1726 aaKnown RBP18.02■□□□□ 0.48
CLIC4-201ENST00000374379 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
CLIC4-201ENST00000374379 TROQ12816 1431 aaPredicted RBP18.01■□□□□ 0.47
CLIC4-201ENST00000374379 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
CLIC4-201ENST00000374379 CCDC7Q96M83 1385 aa18■□□□□ 0.47
CLIC4-201ENST00000374379 CCDC144AA2RUR9 1427 aa18■□□□□ 0.47
CLIC4-201ENST00000374379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.472e-6■■□□□ 13.2
CLIC4-201ENST00000374379 HECW1Q76N89 1606 aa18■□□□□ 0.47
CLIC4-201ENST00000374379 MAPKBP1O60336 1514 aa18■□□□□ 0.47
CLIC4-201ENST00000374379 DAPK1P53355 1430 aa18■□□□□ 0.47
CLIC4-201ENST00000374379 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
CLIC4-201ENST00000374379 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
CLIC4-201ENST00000374379 MIA2Q96PC5 1412 aa17.99■□□□□ 0.47
CLIC4-201ENST00000374379 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
CLIC4-201ENST00000374379 KANK1Q14678 1352 aa17.97■□□□□ 0.47
CLIC4-201ENST00000374379 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
CLIC4-201ENST00000374379 STK26Q9P289 416 aa17.97■□□□□ 0.47
CLIC4-201ENST00000374379 PTPN23Q9H3S7 1636 aa17.96■□□□□ 0.47
CLIC4-201ENST00000374379 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
CLIC4-201ENST00000374379 NEFMP07197 916 aa17.96■□□□□ 0.47
CLIC4-201ENST00000374379 RBM19Q9Y4C8 960 aaKnown RBP17.96■□□□□ 0.47
CLIC4-201ENST00000374379 NBR1Q14596 966 aa17.95■□□□□ 0.46
CLIC4-201ENST00000374379 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
CLIC4-201ENST00000374379 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
CLIC4-201ENST00000374379 PANK3Q9H999 370 aa17.94■□□□□ 0.46
CLIC4-201ENST00000374379 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
CLIC4-201ENST00000374379 ABCC5O15440 1437 aa17.93■□□□□ 0.46
CLIC4-201ENST00000374379 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
CLIC4-201ENST00000374379 C9orf84Q5VXU9 1444 aa17.91■□□□□ 0.46
CLIC4-201ENST00000374379 PLEKHG5O94827 1062 aa17.91■□□□□ 0.46
CLIC4-201ENST00000374379 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
CLIC4-201ENST00000374379 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
CLIC4-201ENST00000374379 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
CLIC4-201ENST00000374379 TRAK1Q9UPV9 953 aa17.89■□□□□ 0.45
CLIC4-201ENST00000374379 POGKQ9P215 609 aa17.88■□□□□ 0.45
CLIC4-201ENST00000374379 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
CLIC4-201ENST00000374379 RALBP1Q15311 655 aa17.88■□□□□ 0.45
CLIC4-201ENST00000374379 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
CLIC4-201ENST00000374379 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
CLIC4-201ENST00000374379 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
CLIC4-201ENST00000374379 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
CLIC4-201ENST00000374379 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
CLIC4-201ENST00000374379 ANKRD30BQ9BXX2 1392 aa17.86■□□□□ 0.45
CLIC4-201ENST00000374379 WASHC2CQ9Y4E1 1318 aa17.85■□□□□ 0.45
CLIC4-201ENST00000374379 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
CLIC4-201ENST00000374379 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
CLIC4-201ENST00000374379 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
CLIC4-201ENST00000374379 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
CLIC4-201ENST00000374379 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
CLIC4-201ENST00000374379 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.45
CLIC4-201ENST00000374379 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
CLIC4-201ENST00000374379 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
CLIC4-201ENST00000374379 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
CLIC4-201ENST00000374379 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
CLIC4-201ENST00000374379 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
CLIC4-201ENST00000374379 NCOA1Q15788 1441 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms