RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 ABCC5O15440 1437 aa10.51□□□□□ -0.73
GARNL3-202ENST00000373387 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
GARNL3-202ENST00000373387 BCORL1Q5H9F3 1711 aa10.51□□□□□ -0.73
GARNL3-202ENST00000373387 PZPP20742 1482 aa10.49□□□□□ -0.73
GARNL3-202ENST00000373387 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
GARNL3-202ENST00000373387 KIF14Q15058 1648 aa10.49□□□□□ -0.73
GARNL3-202ENST00000373387 ADGRL2O95490 1459 aa10.49□□□□□ -0.73
GARNL3-202ENST00000373387 RBM19Q9Y4C8 960 aaKnown RBP10.49□□□□□ -0.73
GARNL3-202ENST00000373387 BCANQ96GW7 911 aa10.48□□□□□ -0.73
GARNL3-202ENST00000373387 MRC2Q9UBG0 1479 aa10.48□□□□□ -0.73
GARNL3-202ENST00000373387 CCDC7Q96M83 1385 aa10.48□□□□□ -0.73
GARNL3-202ENST00000373387 KDM5CP41229 1560 aa10.48□□□□□ -0.73
GARNL3-202ENST00000373387 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
GARNL3-202ENST00000373387 KIAA0586Q9BVV6 1533 aa10.47□□□□□ -0.73
GARNL3-202ENST00000373387 C11orf95C9JLR9 678 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-202ENST00000373387 MPHOSPH9Q99550 1183 aa10.47□□□□□ -0.73
GARNL3-202ENST00000373387 E9PCH4 1651 aa10.47□□□□□ -0.73
GARNL3-202ENST00000373387 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
GARNL3-202ENST00000373387 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
GARNL3-202ENST00000373387 ERICH6BQ5W0A0 696 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 IFT140Q96RY7 1462 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 CCDC184Q52MB2 194 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 KDM5DQ9BY66 1539 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 CAMSAP2Q08AD1 1489 aa10.44□□□□□ -0.74
GARNL3-202ENST00000373387 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-202ENST00000373387 NBPF8Q3BBV2 869 aa10.43□□□□□ -0.74
GARNL3-202ENST00000373387 GRIN2AQ12879 1464 aa10.43□□□□□ -0.74
GARNL3-202ENST00000373387 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
GARNL3-202ENST00000373387 DHX29Q7Z478 1369 aaKnown RBP10.43□□□□□ -0.74
GARNL3-202ENST00000373387 NEFLP07196 543 aa10.42□□□□□ -0.74
GARNL3-202ENST00000373387 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
GARNL3-202ENST00000373387 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-202ENST00000373387 MSH5O43196 834 aa10.42□□□□□ -0.74
GARNL3-202ENST00000373387 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
GARNL3-202ENST00000373387 UHRF1BP1Q6BDS2 1440 aa10.41□□□□□ -0.74
GARNL3-202ENST00000373387 GPATCH8Q9UKJ3 1502 aaKnown RBP10.4□□□□□ -0.74
GARNL3-202ENST00000373387 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
GARNL3-202ENST00000373387 ZBED9Q6R2W3 1325 aa10.4□□□□□ -0.74
GARNL3-202ENST00000373387 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.75
GARNL3-202ENST00000373387 HNRNPUQ00839 825 aaKnown RBP eCLIP10.39□□□□□ -0.75
GARNL3-202ENST00000373387 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
GARNL3-202ENST00000373387 KIF7Q2M1P5 1343 aa10.39□□□□□ -0.75
GARNL3-202ENST00000373387 ARHGEF12Q9NZN5 1544 aa10.39□□□□□ -0.75
GARNL3-202ENST00000373387 ABCA8O94911 1581 aa10.38□□□□□ -0.75
GARNL3-202ENST00000373387 KIAA1107Q9UPP5 1409 aa10.37□□□□□ -0.75
GARNL3-202ENST00000373387 ABCC10Q5T3U5 1492 aa10.37□□□□□ -0.75
GARNL3-202ENST00000373387 RALGAPBQ86X10 1494 aa10.37□□□□□ -0.75
GARNL3-202ENST00000373387 RNF123Q5XPI4 1314 aa10.37□□□□□ -0.75
GARNL3-202ENST00000373387 FOXD1Q16676 465 aa10.36□□□□□ -0.75
GARNL3-202ENST00000373387 ZNF644Q9H582 1327 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-202ENST00000373387 MAGI1Q96QZ7 1491 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-202ENST00000373387 PTPRGP23470 1445 aa10.36□□□□□ -0.75
GARNL3-202ENST00000373387 SMG6Q86US8 1419 aaKnown RBP10.36□□□□□ -0.75
GARNL3-202ENST00000373387 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-202ENST00000373387 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
GARNL3-202ENST00000373387 NUP160Q12769 1436 aa10.34□□□□□ -0.75
GARNL3-202ENST00000373387 LAMC1P11047 1609 aa10.34□□□□□ -0.75
GARNL3-202ENST00000373387 TRPM1Q7Z4N2 1603 aa10.34□□□□□ -0.75
GARNL3-202ENST00000373387 PLB1Q6P1J6 1458 aa10.34□□□□□ -0.75
GARNL3-202ENST00000373387 PPP4R2Q9NY27 417 aa10.33□□□□□ -0.76
GARNL3-202ENST00000373387 ARID4BQ4LE39 1312 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-202ENST00000373387 CDC42BPBQ9Y5S2 1711 aa10.33□□□□□ -0.76
GARNL3-202ENST00000373387 SYNJ2O15056 1496 aa10.32□□□□□ -0.76
GARNL3-202ENST00000373387 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
GARNL3-202ENST00000373387 UNC13BO14795 1591 aa10.3□□□□□ -0.76
GARNL3-202ENST00000373387 MYO5CQ9NQX4 1742 aa10.3□□□□□ -0.76
GARNL3-202ENST00000373387 LRPPRCP42704 1394 aaKnown RBP10.3□□□□□ -0.76
GARNL3-202ENST00000373387 USP47Q96K76 1375 aa10.3□□□□□ -0.76
GARNL3-202ENST00000373387 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
GARNL3-202ENST00000373387 IRX6P78412 446 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-202ENST00000373387 SAMD9LQ8IVG5 1584 aa10.28□□□□□ -0.76
GARNL3-202ENST00000373387 ANKRD50Q9ULJ7 1429 aa10.28□□□□□ -0.76
GARNL3-202ENST00000373387 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
GARNL3-202ENST00000373387 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
GARNL3-202ENST00000373387 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
GARNL3-202ENST00000373387 ANKRD30AQ9BXX3 1397 aa10.26□□□□□ -0.77
GARNL3-202ENST00000373387 ATP10BO94823 1461 aa10.26□□□□□ -0.77
GARNL3-202ENST00000373387 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
GARNL3-202ENST00000373387 RNF17Q9BXT8 1623 aaKnown RBP10.26□□□□□ -0.77
GARNL3-202ENST00000373387 C9orf84Q5VXU9 1444 aa10.26□□□□□ -0.77
GARNL3-202ENST00000373387 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
GARNL3-202ENST00000373387 IQGAP3Q86VI3 1631 aa10.25□□□□□ -0.77
GARNL3-202ENST00000373387 FAM9BQ8IZU0 186 aa10.24□□□□□ -0.77
GARNL3-202ENST00000373387 KTN1Q86UP2 1357 aaKnown RBP10.24□□□□□ -0.77
GARNL3-202ENST00000373387 PLXNC1O60486 1568 aa10.24□□□□□ -0.77
GARNL3-202ENST00000373387 PRDM15P57071 1507 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-202ENST00000373387 FAM135AQ9P2D6 1515 aa10.24□□□□□ -0.77
GARNL3-202ENST00000373387 PNISRQ8TF01 805 aaKnown RBP10.23□□□□□ -0.77
GARNL3-202ENST00000373387 NUDCQ9Y266 331 aa10.23□□□□□ -0.77
GARNL3-202ENST00000373387 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
GARNL3-202ENST00000373387 ARID3CA6NKF2 412 aa10.22□□□□□ -0.77
GARNL3-202ENST00000373387 BCL11AQ9H165 835 aa10.22□□□□□ -0.77
GARNL3-202ENST00000373387 CFDP1Q9UEE9 299 aaPredicted RBP10.22□□□□□ -0.77
GARNL3-202ENST00000373387 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
GARNL3-202ENST00000373387 GPRASP1Q5JY77 1395 aa10.21□□□□□ -0.77
GARNL3-202ENST00000373387 PKD2Q13563 968 aa10.21□□□□□ -0.77
GARNL3-202ENST00000373387 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.77
GARNL3-202ENST00000373387 BRD4O60885 1362 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms