RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 ZNF644Q9H582 1327 aaPredicted RBP19.36■□□□□ 0.69
CSTF2-201ENST00000372972 CFDP1Q9UEE9 299 aaPredicted RBP19.35■□□□□ 0.69
CSTF2-201ENST00000372972 MIER1Q8N108 512 aa19.32■□□□□ 0.68
CSTF2-201ENST00000372972 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
CSTF2-201ENST00000372972 ZCCHC11Q5TAX3 1644 aaKnown RBP19.32■□□□□ 0.68
CSTF2-201ENST00000372972 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
CSTF2-201ENST00000372972 KDM5BQ9UGL1 1544 aa19.31■□□□□ 0.68
CSTF2-201ENST00000372972 DAPK1P53355 1430 aa19.31■□□□□ 0.68
CSTF2-201ENST00000372972 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
CSTF2-201ENST00000372972 ROCK1Q13464 1354 aa19.3■□□□□ 0.68
CSTF2-201ENST00000372972 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
CSTF2-201ENST00000372972 ABCC5O15440 1437 aa19.29■□□□□ 0.68
CSTF2-201ENST00000372972 ZNF777Q9ULD5 760 aaPredicted RBP19.28■□□□□ 0.68
CSTF2-201ENST00000372972 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
CSTF2-201ENST00000372972 PPP1R15AO75807 674 aaPredicted RBP19.28■□□□□ 0.68
CSTF2-201ENST00000372972 TRIM52Q96A61 297 aa19.25■□□□□ 0.67
CSTF2-201ENST00000372972 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
CSTF2-201ENST00000372972 CENPBP07199 599 aaPredicted RBP19.24■□□□□ 0.67
CSTF2-201ENST00000372972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.67
CSTF2-201ENST00000372972 TTC37Q6PGP7 1564 aa19.23■□□□□ 0.67
CSTF2-201ENST00000372972 KCNH8Q96L42 1107 aa19.23■□□□□ 0.67
CSTF2-201ENST00000372972 KDM6BO15054 1643 aa19.22■□□□□ 0.67
CSTF2-201ENST00000372972 PREX2Q70Z35 1606 aa19.22■□□□□ 0.67
CSTF2-201ENST00000372972 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
CSTF2-201ENST00000372972 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
CSTF2-201ENST00000372972 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
CSTF2-201ENST00000372972 DENND4BO75064 1496 aaPredicted RBP19.17■□□□□ 0.66
CSTF2-201ENST00000372972 SAMD9LQ8IVG5 1584 aa19.16■□□□□ 0.66
CSTF2-201ENST00000372972 MYO5CQ9NQX4 1742 aa19.16■□□□□ 0.66
CSTF2-201ENST00000372972 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
CSTF2-201ENST00000372972 ARHGAP5Q13017 1502 aa19.14■□□□□ 0.66
CSTF2-201ENST00000372972 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
CSTF2-201ENST00000372972 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.65
CSTF2-201ENST00000372972 WDR7Q9Y4E6 1490 aa19.13■□□□□ 0.65
CSTF2-201ENST00000372972 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
CSTF2-201ENST00000372972 MBD5Q9P267 1494 aa19.12■□□□□ 0.65
CSTF2-201ENST00000372972 ARHGEF5Q12774 1597 aa19.12■□□□□ 0.65
CSTF2-201ENST00000372972 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
CSTF2-201ENST00000372972 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
CSTF2-201ENST00000372972 PLCH2O75038 1416 aa19.1■□□□□ 0.65
CSTF2-201ENST00000372972 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
CSTF2-201ENST00000372972 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
CSTF2-201ENST00000372972 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.65
CSTF2-201ENST00000372972 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.65
CSTF2-201ENST00000372972 NPM1P06748 294 aaKnown RBP eCLIP19.08■□□□□ 0.64
CSTF2-201ENST00000372972 TSPY4P0CV99 314 aa19.08■□□□□ 0.64
CSTF2-201ENST00000372972 TSPY10P0CW01 314 aa19.08■□□□□ 0.64
CSTF2-201ENST00000372972 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
CSTF2-201ENST00000372972 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
CSTF2-201ENST00000372972 CCDC141Q6ZP82 1450 aa19.07■□□□□ 0.64
CSTF2-201ENST00000372972 RSPH4AQ5TD94 716 aa19.06■□□□□ 0.64
CSTF2-201ENST00000372972 ANKRD30BQ9BXX2 1392 aa19.05■□□□□ 0.64
CSTF2-201ENST00000372972 FOXD1Q16676 465 aa19.05■□□□□ 0.64
CSTF2-201ENST00000372972 EFCAB2Q5VUJ9 269 aa19.05■□□□□ 0.64
CSTF2-201ENST00000372972 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
CSTF2-201ENST00000372972 KIAA1107Q9UPP5 1409 aa19.04■□□□□ 0.64
CSTF2-201ENST00000372972 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
CSTF2-201ENST00000372972 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.63
CSTF2-201ENST00000372972 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.63
CSTF2-201ENST00000372972 ANKRD50Q9ULJ7 1429 aa19.01■□□□□ 0.63
CSTF2-201ENST00000372972 PZPP20742 1482 aa19.01■□□□□ 0.63
CSTF2-201ENST00000372972 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
CSTF2-201ENST00000372972 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
CSTF2-201ENST00000372972 RPRD2Q5VT52 1461 aaKnown RBP19■□□□□ 0.63
CSTF2-201ENST00000372972 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
CSTF2-201ENST00000372972 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
CSTF2-201ENST00000372972 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
CSTF2-201ENST00000372972 L3MBTL2Q969R5 705 aa18.99■□□□□ 0.63
CSTF2-201ENST00000372972 ABCC1P33527 1531 aa18.98■□□□□ 0.63
CSTF2-201ENST00000372972 MAST1Q9Y2H9 1570 aa18.98■□□□□ 0.63
CSTF2-201ENST00000372972 KIF15Q9NS87 1388 aa18.98■□□□□ 0.63
CSTF2-201ENST00000372972 CYB5RLQ6IPT4 315 aa18.97■□□□□ 0.63
CSTF2-201ENST00000372972 FANCAO15360 1455 aa18.94■□□□□ 0.62
CSTF2-201ENST00000372972 TRAPPC8Q9Y2L5 1435 aa18.93■□□□□ 0.62
CSTF2-201ENST00000372972 PKD2Q13563 968 aa18.92■□□□□ 0.62
CSTF2-201ENST00000372972 NUP155O75694 1391 aa18.91■□□□□ 0.62
CSTF2-201ENST00000372972 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
CSTF2-201ENST00000372972 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
CSTF2-201ENST00000372972 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
CSTF2-201ENST00000372972 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.61
CSTF2-201ENST00000372972 CD109Q6YHK3 1445 aa18.87■□□□□ 0.61
CSTF2-201ENST00000372972 HSPA5P11021 654 aaKnown RBP18.87■□□□□ 0.61
CSTF2-201ENST00000372972 AFAP1Q8N556 730 aa18.87■□□□□ 0.61
CSTF2-201ENST00000372972 KDM5DQ9BY66 1539 aa18.87■□□□□ 0.61
CSTF2-201ENST00000372972 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
CSTF2-201ENST00000372972 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
CSTF2-201ENST00000372972 SPAG9O60271 1321 aaKnown RBP18.85■□□□□ 0.61
CSTF2-201ENST00000372972 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
CSTF2-201ENST00000372972 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
CSTF2-201ENST00000372972 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.6
CSTF2-201ENST00000372972 ANP32CO43423 234 aa18.82■□□□□ 0.6
CSTF2-201ENST00000372972 ZFYVE16Q7Z3T8 1539 aa18.82■□□□□ 0.6
CSTF2-201ENST00000372972 CFAP74Q9C0B2 1584 aa18.8■□□□□ 0.6
CSTF2-201ENST00000372972 ERBINQ96RT1 1412 aa18.79■□□□□ 0.6
CSTF2-201ENST00000372972 UNC13BO14795 1591 aa18.79■□□□□ 0.6
CSTF2-201ENST00000372972 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
CSTF2-201ENST00000372972 INO80Q9ULG1 1556 aaPredicted RBP18.78■□□□□ 0.6
CSTF2-201ENST00000372972 ATP7AQ04656 1500 aa18.78■□□□□ 0.6
CSTF2-201ENST00000372972 WASHC2AQ641Q2 1341 aa18.77■□□□□ 0.6
CSTF2-201ENST00000372972 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms