RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 ZNF644Q9H582 1327 aaPredicted RBP29.33■■■□□ 2.29
PABPC4-204ENST00000372862 ACIN1Q9UKV3 1341 aaKnown RBP29.33■■■□□ 2.29
PABPC4-204ENST00000372862 CAMSAP2Q08AD1 1489 aa29.32■■■□□ 2.28
PABPC4-204ENST00000372862 KDM6BO15054 1643 aa29.31■■■□□ 2.28
PABPC4-204ENST00000372862 MIER1Q8N108 512 aa29.28■■■□□ 2.28
PABPC4-204ENST00000372862 CDC42BPAQ5VT25 1732 aa29.28■■■□□ 2.28
PABPC4-204ENST00000372862 TRIM52Q96A61 297 aa29.26■■■□□ 2.27
PABPC4-204ENST00000372862 TONSLQ96HA7 1378 aa29.26■■■□□ 2.27
PABPC4-204ENST00000372862 PPP1R15AO75807 674 aaPredicted RBP29.25■■■□□ 2.27
PABPC4-204ENST00000372862 ADGBQ8N7X0 1667 aa29.25■■■□□ 2.27
PABPC4-204ENST00000372862 ABCC10Q5T3U5 1492 aa29.24■■■□□ 2.27
PABPC4-204ENST00000372862 CROCC2H7BZ55 1655 aa29.22■■■□□ 2.27
PABPC4-204ENST00000372862 ZNF777Q9ULD5 760 aaPredicted RBP29.2■■■□□ 2.26
PABPC4-204ENST00000372862 CENPBP07199 599 aaPredicted RBP29.18■■■□□ 2.26
PABPC4-204ENST00000372862 DENND4BO75064 1496 aaPredicted RBP29.16■■■□□ 2.26
PABPC4-204ENST00000372862 MPHOSPH9Q99550 1183 aa29.16■■■□□ 2.26
PABPC4-204ENST00000372862 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
PABPC4-204ENST00000372862 ERCC6L2Q5T890 1561 aa29.14■■■□□ 2.26
PABPC4-204ENST00000372862 ADGRL2O95490 1459 aa29.14■■■□□ 2.26
PABPC4-204ENST00000372862 NCOA1Q15788 1441 aa29.13■■■□□ 2.25
PABPC4-204ENST00000372862 ABCC2Q92887 1545 aa29.1■■■□□ 2.25
PABPC4-204ENST00000372862 ANKRD30AQ9BXX3 1397 aa29.07■■■□□ 2.24
PABPC4-204ENST00000372862 SHANK2Q9UPX8 1470 aa29.06■■■□□ 2.24
PABPC4-204ENST00000372862 PREX2Q70Z35 1606 aa29.05■■■□□ 2.24
PABPC4-204ENST00000372862 CDC42BPBQ9Y5S2 1711 aa29.04■■■□□ 2.24
PABPC4-204ENST00000372862 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.23
PABPC4-204ENST00000372862 KDM5BQ9UGL1 1544 aa29.01■■■□□ 2.23
PABPC4-204ENST00000372862 C9orf84Q5VXU9 1444 aa28.99■■■□□ 2.23
PABPC4-204ENST00000372862 SLC4A1APQ9BWU0 796 aaKnown RBP28.98■■■□□ 2.23
PABPC4-204ENST00000372862 TSPY4P0CV99 314 aa28.97■■■□□ 2.23
PABPC4-204ENST00000372862 TSPY10P0CW01 314 aa28.97■■■□□ 2.23
PABPC4-204ENST00000372862 ANKRD30BQ9BXX2 1392 aa28.96■■■□□ 2.23
PABPC4-204ENST00000372862 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
PABPC4-204ENST00000372862 YTHDC1Q96MU7 727 aaKnown RBP28.95■■■□□ 2.23
PABPC4-204ENST00000372862 UHRF1BP1LA0JNW5 1464 aa28.95■■■□□ 2.22
PABPC4-204ENST00000372862 ANKRD50Q9ULJ7 1429 aa28.94■■■□□ 2.22
PABPC4-204ENST00000372862 FOXD1Q16676 465 aa28.94■■■□□ 2.22
PABPC4-204ENST00000372862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.93■■■□□ 2.222e-24■■□□□ 11.5
PABPC4-204ENST00000372862 TTC37Q6PGP7 1564 aa28.93■■■□□ 2.22
PABPC4-204ENST00000372862 PZPP20742 1482 aa28.93■■■□□ 2.22
PABPC4-204ENST00000372862 SCAF1Q9H7N4 1312 aaKnown RBP28.93■■■□□ 2.22
PABPC4-204ENST00000372862 MYO5CQ9NQX4 1742 aa28.92■■■□□ 2.22
PABPC4-204ENST00000372862 MBD5Q9P267 1494 aa28.92■■■□□ 2.22
PABPC4-204ENST00000372862 ZCCHC11Q5TAX3 1644 aaKnown RBP28.92■■■□□ 2.22
PABPC4-204ENST00000372862 HNRNPMP52272 730 aaKnown RBP eCLIP28.91■■■□□ 2.221e-6■■■■□ 26
PABPC4-204ENST00000372862 RSPH4AQ5TD94 716 aa28.91■■■□□ 2.22
PABPC4-204ENST00000372862 RPRD2Q5VT52 1461 aaKnown RBP28.91■■■□□ 2.22
PABPC4-204ENST00000372862 CCDC141Q6ZP82 1450 aa28.9■■■□□ 2.22
PABPC4-204ENST00000372862 ARHGAP5Q13017 1502 aa28.88■■■□□ 2.21
PABPC4-204ENST00000372862 HIRIP3Q9BW71 556 aaPredicted RBP28.84■■■□□ 2.21
PABPC4-204ENST00000372862 DDX10Q13206 875 aaKnown RBP28.83■■■□□ 2.21
PABPC4-204ENST00000372862 L3MBTL2Q969R5 705 aa28.83■■■□□ 2.21
PABPC4-204ENST00000372862 KIF15Q9NS87 1388 aa28.82■■■□□ 2.2
PABPC4-204ENST00000372862 KIAA1107Q9UPP5 1409 aa28.82■■■□□ 2.2
PABPC4-204ENST00000372862 SYCP2Q9BX26 1530 aa28.81■■■□□ 2.2
PABPC4-204ENST00000372862 PLEKHH2Q8IVE3 1493 aa28.81■■■□□ 2.2
PABPC4-204ENST00000372862 KCNH8Q96L42 1107 aa28.8■■■□□ 2.2
PABPC4-204ENST00000372862 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
PABPC4-204ENST00000372862 KDM5DQ9BY66 1539 aa28.78■■■□□ 2.2
PABPC4-204ENST00000372862 TEX14Q8IWB6 1497 aa28.78■■■□□ 2.2
PABPC4-204ENST00000372862 NUP155O75694 1391 aa28.76■■■□□ 2.19
PABPC4-204ENST00000372862 PKD2Q13563 968 aa28.75■■■□□ 2.19
PABPC4-204ENST00000372862 PLCH2O75038 1416 aa28.74■■■□□ 2.19
PABPC4-204ENST00000372862 PLXNC1O60486 1568 aa28.68■■■□□ 2.18
PABPC4-204ENST00000372862 EIF4G2P78344 907 aaKnown RBP eCLIP28.67■■■□□ 2.18
PABPC4-204ENST00000372862 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
PABPC4-204ENST00000372862 HSPA5P11021 654 aaKnown RBP28.65■■■□□ 2.18
PABPC4-204ENST00000372862 GTF3C3Q9Y5Q9 886 aa28.65■■■□□ 2.18
PABPC4-204ENST00000372862 ARAP3Q8WWN8 1544 aa28.62■■■□□ 2.17
PABPC4-204ENST00000372862 ABCC1P33527 1531 aa28.62■■■□□ 2.17
PABPC4-204ENST00000372862 ARHGEF12Q9NZN5 1544 aa28.62■■■□□ 2.17
PABPC4-204ENST00000372862 NBPF8Q3BBV2 869 aa28.61■■■□□ 2.17
PABPC4-204ENST00000372862 WDR7Q9Y4E6 1490 aa28.6■■■□□ 2.17
PABPC4-204ENST00000372862 UNC13BO14795 1591 aa28.6■■■□□ 2.17
PABPC4-204ENST00000372862 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
PABPC4-204ENST00000372862 ANP32CO43423 234 aa28.58■■■□□ 2.17
PABPC4-204ENST00000372862 DUOX2Q9NRD8 1548 aa28.57■■■□□ 2.16
PABPC4-204ENST00000372862 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
PABPC4-204ENST00000372862 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
PABPC4-204ENST00000372862 ERBINQ96RT1 1412 aa28.5■■■□□ 2.15
PABPC4-204ENST00000372862 WASHC2AQ641Q2 1341 aa28.5■■■□□ 2.15
PABPC4-204ENST00000372862 CCER2I3L3R5 266 aa28.5■■■□□ 2.15
PABPC4-204ENST00000372862 IQGAP3Q86VI3 1631 aa28.49■■■□□ 2.15
PABPC4-204ENST00000372862 TRAPPC8Q9Y2L5 1435 aa28.49■■■□□ 2.15
PABPC4-204ENST00000372862 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
PABPC4-204ENST00000372862 SPATA31E1Q6ZUB1 1445 aa28.46■■■□□ 2.15
PABPC4-204ENST00000372862 UHRF1BP1Q6BDS2 1440 aa28.44■■■□□ 2.14
PABPC4-204ENST00000372862 RTEL1-TNFRSF6BF6WH68 1400 aa28.44■■■□□ 2.14
PABPC4-204ENST00000372862 ASXL2Q76L83 1435 aa28.43■■■□□ 2.14
PABPC4-204ENST00000372862 MAGI2Q86UL8 1455 aa28.43■■■□□ 2.14
PABPC4-204ENST00000372862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.43■■■□□ 2.148e-9■■■□□ 14.9
PABPC4-204ENST00000372862 SPAG9O60271 1321 aaKnown RBP28.42■■■□□ 2.14
PABPC4-204ENST00000372862 FANCAO15360 1455 aa28.42■■■□□ 2.14
PABPC4-204ENST00000372862 CCDC7Q96M83 1385 aa28.4■■■□□ 2.14
PABPC4-204ENST00000372862 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
PABPC4-204ENST00000372862 NPM1P06748 294 aaKnown RBP eCLIP28.38■■■□□ 2.13
PABPC4-204ENST00000372862 CCDC144AA2RUR9 1427 aa28.38■■■□□ 2.13
PABPC4-204ENST00000372862 ZFYVE16Q7Z3T8 1539 aa28.38■■■□□ 2.13
PABPC4-204ENST00000372862 CNTLNQ9NXG0 1405 aa28.37■■■□□ 2.13
PABPC4-204ENST00000372862 RALGAPBQ86X10 1494 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms