RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
PDE6C-201ENST00000371447 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.23
PDE6C-201ENST00000371447 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
PDE6C-201ENST00000371447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDE6C-201ENST00000371447 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
PDE6C-201ENST00000371447 KDM6BO15054 1643 aa16.48■□□□□ 0.23
PDE6C-201ENST00000371447 PKD2Q13563 968 aa16.47■□□□□ 0.23
PDE6C-201ENST00000371447 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
PDE6C-201ENST00000371447 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDE6C-201ENST00000371447 ABCC5O15440 1437 aa16.46■□□□□ 0.23
PDE6C-201ENST00000371447 TSPY4P0CV99 314 aa16.46■□□□□ 0.23
PDE6C-201ENST00000371447 TSPY10P0CW01 314 aa16.46■□□□□ 0.23
PDE6C-201ENST00000371447 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
PDE6C-201ENST00000371447 NBPF8Q3BBV2 869 aa16.45■□□□□ 0.22
PDE6C-201ENST00000371447 DAPK1P53355 1430 aa16.45■□□□□ 0.22
PDE6C-201ENST00000371447 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
PDE6C-201ENST00000371447 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
PDE6C-201ENST00000371447 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
PDE6C-201ENST00000371447 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
PDE6C-201ENST00000371447 C11orf95C9JLR9 678 aaPredicted RBP16.42■□□□□ 0.22
PDE6C-201ENST00000371447 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
PDE6C-201ENST00000371447 PTPRGP23470 1445 aa16.41■□□□□ 0.22
PDE6C-201ENST00000371447 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
PDE6C-201ENST00000371447 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
PDE6C-201ENST00000371447 FKBP8Q14318 412 aa16.4■□□□□ 0.22
PDE6C-201ENST00000371447 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
PDE6C-201ENST00000371447 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDE6C-201ENST00000371447 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
PDE6C-201ENST00000371447 ARHGEF11O15085 1522 aa16.39■□□□□ 0.21
PDE6C-201ENST00000371447 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
PDE6C-201ENST00000371447 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
PDE6C-201ENST00000371447 TCOF1Q13428 1488 aaKnown RBP16.37■□□□□ 0.21
PDE6C-201ENST00000371447 NUP155O75694 1391 aa16.37■□□□□ 0.21
PDE6C-201ENST00000371447 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
PDE6C-201ENST00000371447 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
PDE6C-201ENST00000371447 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
PDE6C-201ENST00000371447 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
PDE6C-201ENST00000371447 CAMSAP2Q08AD1 1489 aa16.34■□□□□ 0.21
PDE6C-201ENST00000371447 KIF14Q15058 1648 aa16.33■□□□□ 0.21
PDE6C-201ENST00000371447 ATP10BO94823 1461 aa16.32■□□□□ 0.2
PDE6C-201ENST00000371447 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
PDE6C-201ENST00000371447 ANKRD30BQ9BXX2 1392 aa16.32■□□□□ 0.2
PDE6C-201ENST00000371447 DCAF11Q8TEB1 546 aa16.31■□□□□ 0.2
PDE6C-201ENST00000371447 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
PDE6C-201ENST00000371447 NUP160Q12769 1436 aa16.3■□□□□ 0.2
PDE6C-201ENST00000371447 NEFLP07196 543 aa16.3■□□□□ 0.2
PDE6C-201ENST00000371447 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
PDE6C-201ENST00000371447 ANKRD50Q9ULJ7 1429 aa16.29■□□□□ 0.2
PDE6C-201ENST00000371447 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
PDE6C-201ENST00000371447 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
PDE6C-201ENST00000371447 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
PDE6C-201ENST00000371447 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
PDE6C-201ENST00000371447 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
PDE6C-201ENST00000371447 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
PDE6C-201ENST00000371447 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
PDE6C-201ENST00000371447 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
PDE6C-201ENST00000371447 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
PDE6C-201ENST00000371447 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
PDE6C-201ENST00000371447 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
PDE6C-201ENST00000371447 PZPP20742 1482 aa16.19■□□□□ 0.18
PDE6C-201ENST00000371447 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
PDE6C-201ENST00000371447 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
PDE6C-201ENST00000371447 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
PDE6C-201ENST00000371447 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
PDE6C-201ENST00000371447 AFAP1Q8N556 730 aa16.18■□□□□ 0.18
PDE6C-201ENST00000371447 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
PDE6C-201ENST00000371447 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
PDE6C-201ENST00000371447 KIAA1107Q9UPP5 1409 aa16.17■□□□□ 0.18
PDE6C-201ENST00000371447 USP47Q96K76 1375 aa16.16■□□□□ 0.18
PDE6C-201ENST00000371447 NBPF1Q3BBV0 1214 aa16.14■□□□□ 0.17
PDE6C-201ENST00000371447 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
PDE6C-201ENST00000371447 ABCA8O94911 1581 aa16.12■□□□□ 0.17
PDE6C-201ENST00000371447 TEX14Q8IWB6 1497 aa16.11■□□□□ 0.17
PDE6C-201ENST00000371447 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
PDE6C-201ENST00000371447 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
PDE6C-201ENST00000371447 CNTLNQ9NXG0 1405 aa16.1■□□□□ 0.17
PDE6C-201ENST00000371447 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
PDE6C-201ENST00000371447 ROCK2O75116 1388 aaKnown RBP16.08■□□□□ 0.16
PDE6C-201ENST00000371447 TMC1Q8TDI8 760 aa16.06■□□□□ 0.16
PDE6C-201ENST00000371447 ITSN2Q9NZM3 1697 aa16.06■□□□□ 0.16
PDE6C-201ENST00000371447 CHD1O14646 1710 aa16.06■□□□□ 0.16
PDE6C-201ENST00000371447 SYCP2Q9BX26 1530 aa16.06■□□□□ 0.16
PDE6C-201ENST00000371447 TSHZ2Q9NRE2 1034 aa16.05■□□□□ 0.16
PDE6C-201ENST00000371447 PLEKHH2Q8IVE3 1493 aa16.04■□□□□ 0.16
PDE6C-201ENST00000371447 MBD5Q9P267 1494 aa16.04■□□□□ 0.16
PDE6C-201ENST00000371447 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
PDE6C-201ENST00000371447 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
PDE6C-201ENST00000371447 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
PDE6C-201ENST00000371447 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
PDE6C-201ENST00000371447 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
PDE6C-201ENST00000371447 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
PDE6C-201ENST00000371447 KIF3BO15066 747 aa16.02■□□□□ 0.16
PDE6C-201ENST00000371447 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
PDE6C-201ENST00000371447 ADGRL2O95490 1459 aa16.02■□□□□ 0.15
PDE6C-201ENST00000371447 SPATA31E1Q6ZUB1 1445 aa16■□□□□ 0.15
PDE6C-201ENST00000371447 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
PDE6C-201ENST00000371447 SAMD9LQ8IVG5 1584 aa15.98■□□□□ 0.15
PDE6C-201ENST00000371447 TRAPPC8Q9Y2L5 1435 aa15.98■□□□□ 0.15
PDE6C-201ENST00000371447 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDE6C-201ENST00000371447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms