RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 GLIPR1L2Q4G1C9 344 aa12.47□□□□□ -0.41
HMGCLL1-204ENST00000370852 MAP3K1Q13233 1512 aa12.46□□□□□ -0.41
HMGCLL1-204ENST00000370852 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.42
HMGCLL1-204ENST00000370852 RRP7BPQ9NSQ0 103 aa12.46□□□□□ -0.42
HMGCLL1-204ENST00000370852 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
HMGCLL1-204ENST00000370852 DENND4BO75064 1496 aaPredicted RBP12.45□□□□□ -0.42
HMGCLL1-204ENST00000370852 DHX29Q7Z478 1369 aaKnown RBP12.45□□□□□ -0.42
HMGCLL1-204ENST00000370852 DAXXQ9UER7 740 aaPredicted RBP12.45□□□□□ -0.42
HMGCLL1-204ENST00000370852 RCAN3Q9UKA8 241 aa12.45□□□□□ -0.42
HMGCLL1-204ENST00000370852 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
HMGCLL1-204ENST00000370852 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
HMGCLL1-204ENST00000370852 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
HMGCLL1-204ENST00000370852 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
HMGCLL1-204ENST00000370852 PCF11O94913 1555 aaKnown RBP12.42□□□□□ -0.42
HMGCLL1-204ENST00000370852 NAIPQ13075 1403 aa12.42□□□□□ -0.42
HMGCLL1-204ENST00000370852 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
HMGCLL1-204ENST00000370852 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
HMGCLL1-204ENST00000370852 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
HMGCLL1-204ENST00000370852 TMC1Q8TDI8 760 aa12.4□□□□□ -0.42
HMGCLL1-204ENST00000370852 PANK2Q9BZ23 570 aa12.4□□□□□ -0.42
HMGCLL1-204ENST00000370852 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
HMGCLL1-204ENST00000370852 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
HMGCLL1-204ENST00000370852 FGD6Q6ZV73 1430 aa12.39□□□□□ -0.43
HMGCLL1-204ENST00000370852 A0A0U1RQG5 324 aaPredicted RBP12.39□□□□□ -0.43
HMGCLL1-204ENST00000370852 HSP90AA1P07900 732 aaKnown RBP12.39□□□□□ -0.43
HMGCLL1-204ENST00000370852 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
HMGCLL1-204ENST00000370852 CUX1P39880 1505 aa12.37□□□□□ -0.43
HMGCLL1-204ENST00000370852 KDM6BO15054 1643 aa12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 RGS3P49796 1198 aa12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
HMGCLL1-204ENST00000370852 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMGCLL1-204ENST00000370852 RRP9O43818 475 aaKnown RBP12.35□□□□□ -0.43
HMGCLL1-204ENST00000370852 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
HMGCLL1-204ENST00000370852 FMN1Q68DA7 1419 aa12.33□□□□□ -0.44
HMGCLL1-204ENST00000370852 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
HMGCLL1-204ENST00000370852 MPHOSPH9Q99550 1183 aa12.33□□□□□ -0.44
HMGCLL1-204ENST00000370852 BCORL1Q5H9F3 1711 aa12.33□□□□□ -0.44
HMGCLL1-204ENST00000370852 IGF1RP08069 1367 aa12.32□□□□□ -0.44
HMGCLL1-204ENST00000370852 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
HMGCLL1-204ENST00000370852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
HMGCLL1-204ENST00000370852 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
HMGCLL1-204ENST00000370852 SEC24BO95487 1268 aa12.31□□□□□ -0.44
HMGCLL1-204ENST00000370852 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
HMGCLL1-204ENST00000370852 ERBB4Q15303 1308 aa12.3□□□□□ -0.44
HMGCLL1-204ENST00000370852 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
HMGCLL1-204ENST00000370852 CLCN1P35523 988 aa12.29□□□□□ -0.44
HMGCLL1-204ENST00000370852 RBM10P98175 930 aaKnown RBP12.29□□□□□ -0.44
HMGCLL1-204ENST00000370852 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
HMGCLL1-204ENST00000370852 USP19O94966 1318 aa12.28□□□□□ -0.44
HMGCLL1-204ENST00000370852 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
HMGCLL1-204ENST00000370852 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
HMGCLL1-204ENST00000370852 POLR1AO95602 1720 aaPredicted RBP12.26□□□□□ -0.45
HMGCLL1-204ENST00000370852 L1TD1Q5T7N2 865 aaKnown RBP12.26□□□□□ -0.45
HMGCLL1-204ENST00000370852 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
HMGCLL1-204ENST00000370852 PRDM4Q9UKN5 801 aa12.25□□□□□ -0.45
HMGCLL1-204ENST00000370852 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
HMGCLL1-204ENST00000370852 TEX14Q8IWB6 1497 aa12.24□□□□□ -0.45
HMGCLL1-204ENST00000370852 GOLGA6L3A6NEY3 463 aa12.23□□□□□ -0.45
HMGCLL1-204ENST00000370852 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
HMGCLL1-204ENST00000370852 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
HMGCLL1-204ENST00000370852 USP47Q96K76 1375 aa12.22□□□□□ -0.45
HMGCLL1-204ENST00000370852 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.45
HMGCLL1-204ENST00000370852 CFTRP13569 1480 aa12.21□□□□□ -0.45
HMGCLL1-204ENST00000370852 HECW1Q76N89 1606 aa12.21□□□□□ -0.45
HMGCLL1-204ENST00000370852 CENPQQ7L2Z9 268 aaPredicted RBP12.21□□□□□ -0.46
HMGCLL1-204ENST00000370852 MYBBP1AQ9BQG0 1328 aaKnown RBP12.21□□□□□ -0.46
HMGCLL1-204ENST00000370852 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.46
HMGCLL1-204ENST00000370852 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
HMGCLL1-204ENST00000370852 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
HMGCLL1-204ENST00000370852 AAMPQ13685 434 aa12.2□□□□□ -0.46
HMGCLL1-204ENST00000370852 ARID3AQ99856 593 aa12.2□□□□□ -0.46
HMGCLL1-204ENST00000370852 RPRD2Q5VT52 1461 aaKnown RBP12.19□□□□□ -0.46
HMGCLL1-204ENST00000370852 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
HMGCLL1-204ENST00000370852 ESPNB1AK53 854 aa12.18□□□□□ -0.46
HMGCLL1-204ENST00000370852 IGHDP01880 384 aa12.18□□□□□ -0.46
HMGCLL1-204ENST00000370852 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
HMGCLL1-204ENST00000370852 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
HMGCLL1-204ENST00000370852 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
HMGCLL1-204ENST00000370852 PDE3BQ13370 1112 aa12.16□□□□□ -0.46
HMGCLL1-204ENST00000370852 BICRAQ9NZM4 1560 aa12.16□□□□□ -0.46
HMGCLL1-204ENST00000370852 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
HMGCLL1-204ENST00000370852 ARID3CA6NKF2 412 aa12.15□□□□□ -0.47
HMGCLL1-204ENST00000370852 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.47
HMGCLL1-204ENST00000370852 MIA2Q96PC5 1412 aa12.14□□□□□ -0.47
HMGCLL1-204ENST00000370852 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
HMGCLL1-204ENST00000370852 CC2D1BQ5T0F9 858 aaKnown RBP12.14□□□□□ -0.47
HMGCLL1-204ENST00000370852 PDCL3Q9H2J4 239 aa12.14□□□□□ -0.47
HMGCLL1-204ENST00000370852 MCM4P33991 863 aa12.13□□□□□ -0.47
HMGCLL1-204ENST00000370852 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
HMGCLL1-204ENST00000370852 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
HMGCLL1-204ENST00000370852 TRAK2O60296 914 aa12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 SNAPC4Q5SXM2 1469 aa12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 RIPK4P57078 832 aa12.12□□□□□ -0.47
HMGCLL1-204ENST00000370852 FGD1P98174 961 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms