RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 PRDM2Q13029 1718 aa17■□□□□ 0.31
USP33-204ENST00000370794 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
USP33-204ENST00000370794 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
USP33-204ENST00000370794 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
USP33-204ENST00000370794 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
USP33-204ENST00000370794 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
USP33-204ENST00000370794 SRPK2P78362 688 aaKnown RBP16.98■□□□□ 0.31
USP33-204ENST00000370794 ZNF644Q9H582 1327 aaPredicted RBP16.97■□□□□ 0.31
USP33-204ENST00000370794 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
USP33-204ENST00000370794 AFAP1Q8N556 730 aa16.95■□□□□ 0.3
USP33-204ENST00000370794 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
USP33-204ENST00000370794 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
USP33-204ENST00000370794 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
USP33-204ENST00000370794 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
USP33-204ENST00000370794 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
USP33-204ENST00000370794 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
USP33-204ENST00000370794 TMF1P82094 1093 aa16.92■□□□□ 0.3
USP33-204ENST00000370794 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
USP33-204ENST00000370794 FKBP8Q14318 412 aa16.91■□□□□ 0.3
USP33-204ENST00000370794 TIMELESSQ9UNS1 1208 aa16.9■□□□□ 0.3
USP33-204ENST00000370794 SOX12O15370 315 aa16.9■□□□□ 0.3
USP33-204ENST00000370794 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
USP33-204ENST00000370794 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
USP33-204ENST00000370794 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
USP33-204ENST00000370794 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
USP33-204ENST00000370794 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
USP33-204ENST00000370794 KIF21BO75037 1637 aa16.85■□□□□ 0.29
USP33-204ENST00000370794 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
USP33-204ENST00000370794 UACAQ9BZF9 1416 aa16.83■□□□□ 0.28
USP33-204ENST00000370794 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
USP33-204ENST00000370794 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
USP33-204ENST00000370794 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
USP33-204ENST00000370794 RAPGEF3O95398 923 aa16.82■□□□□ 0.28
USP33-204ENST00000370794 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
USP33-204ENST00000370794 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
USP33-204ENST00000370794 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
USP33-204ENST00000370794 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
USP33-204ENST00000370794 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
USP33-204ENST00000370794 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
USP33-204ENST00000370794 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
USP33-204ENST00000370794 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
USP33-204ENST00000370794 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
USP33-204ENST00000370794 VGFO15240 615 aaPredicted RBP16.78■□□□□ 0.28
USP33-204ENST00000370794 HDGFL2Q7Z4V5 671 aaPredicted RBP16.78■□□□□ 0.28
USP33-204ENST00000370794 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
USP33-204ENST00000370794 LRRC9Q6ZRR7 1453 aa16.78■□□□□ 0.28
USP33-204ENST00000370794 PHLDB1Q86UU1 1377 aa16.78■□□□□ 0.28
USP33-204ENST00000370794 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
USP33-204ENST00000370794 TRAK1Q9UPV9 953 aa16.77■□□□□ 0.27
USP33-204ENST00000370794 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
USP33-204ENST00000370794 FYCO1Q9BQS8 1478 aa16.76■□□□□ 0.27
USP33-204ENST00000370794 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
USP33-204ENST00000370794 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
USP33-204ENST00000370794 NEUROD2Q15784 382 aa16.75■□□□□ 0.27
USP33-204ENST00000370794 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
USP33-204ENST00000370794 ARXQ96QS3 562 aa16.74■□□□□ 0.27
USP33-204ENST00000370794 SCAPERQ9BY12 1400 aa16.74■□□□□ 0.27
USP33-204ENST00000370794 MAPK8IP3Q9UPT6 1336 aa16.74■□□□□ 0.27
USP33-204ENST00000370794 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
USP33-204ENST00000370794 NGDNQ8NEJ9 315 aaKnown RBP16.73■□□□□ 0.27
USP33-204ENST00000370794 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
USP33-204ENST00000370794 ANKRD50Q9ULJ7 1429 aa16.71■□□□□ 0.27
USP33-204ENST00000370794 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
USP33-204ENST00000370794 PLB1Q6P1J6 1458 aa16.7■□□□□ 0.26
USP33-204ENST00000370794 CUL7Q14999 1698 aa16.69■□□□□ 0.26
USP33-204ENST00000370794 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
USP33-204ENST00000370794 CD109Q6YHK3 1445 aa16.67■□□□□ 0.26
USP33-204ENST00000370794 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
USP33-204ENST00000370794 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
USP33-204ENST00000370794 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
USP33-204ENST00000370794 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
USP33-204ENST00000370794 PLEKHH2Q8IVE3 1493 aa16.64■□□□□ 0.25
USP33-204ENST00000370794 CDK13Q14004 1512 aaKnown RBP16.63■□□□□ 0.25
USP33-204ENST00000370794 CCDC9Q9Y3X0 531 aaKnown RBP16.63■□□□□ 0.25
USP33-204ENST00000370794 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
USP33-204ENST00000370794 EPRSP07814 1512 aaKnown RBP16.62■□□□□ 0.25
USP33-204ENST00000370794 MINK1Q8N4C8 1332 aaPredicted RBP16.6■□□□□ 0.25
USP33-204ENST00000370794 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
USP33-204ENST00000370794 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
USP33-204ENST00000370794 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
USP33-204ENST00000370794 C9orf84Q5VXU9 1444 aa16.59■□□□□ 0.25
USP33-204ENST00000370794 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
USP33-204ENST00000370794 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.25
USP33-204ENST00000370794 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.25
USP33-204ENST00000370794 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
USP33-204ENST00000370794 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
USP33-204ENST00000370794 ARHGEF11O15085 1522 aa16.57■□□□□ 0.24
USP33-204ENST00000370794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP33-204ENST00000370794 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
USP33-204ENST00000370794 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
USP33-204ENST00000370794 NPHP1O15259 732 aa16.53■□□□□ 0.24
USP33-204ENST00000370794 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
USP33-204ENST00000370794 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
USP33-204ENST00000370794 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
USP33-204ENST00000370794 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
USP33-204ENST00000370794 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.24
USP33-204ENST00000370794 KTN1Q86UP2 1357 aaKnown RBP16.52■□□□□ 0.24
USP33-204ENST00000370794 EVC2Q86UK5 1308 aa16.52■□□□□ 0.23
USP33-204ENST00000370794 AMPHP49418 695 aa16.52■□□□□ 0.23
USP33-204ENST00000370794 ATF3P18847 181 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms