RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
SCNM1-202ENST00000368905 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
SCNM1-202ENST00000368905 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
SCNM1-202ENST00000368905 CWC22Q9HCG8 908 aaKnown RBP13.95□□□□□ -0.18
SCNM1-202ENST00000368905 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
SCNM1-202ENST00000368905 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
SCNM1-202ENST00000368905 FHAD1B1AJZ9 1412 aa13.94□□□□□ -0.18
SCNM1-202ENST00000368905 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
SCNM1-202ENST00000368905 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
SCNM1-202ENST00000368905 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
SCNM1-202ENST00000368905 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
SCNM1-202ENST00000368905 ANP32EQ9BTT0 268 aa13.93□□□□□ -0.18
SCNM1-202ENST00000368905 USP35Q9P2H5 1018 aa13.92□□□□□ -0.18
SCNM1-202ENST00000368905 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
SCNM1-202ENST00000368905 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
SCNM1-202ENST00000368905 EFCAB5A4FU69 1503 aa13.9□□□□□ -0.18
SCNM1-202ENST00000368905 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
SCNM1-202ENST00000368905 ARID4BQ4LE39 1312 aaPredicted RBP13.89□□□□□ -0.19
SCNM1-202ENST00000368905 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
SCNM1-202ENST00000368905 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SCNM1-202ENST00000368905 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
SCNM1-202ENST00000368905 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
SCNM1-202ENST00000368905 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
SCNM1-202ENST00000368905 TIAM1Q13009 1591 aa13.86□□□□□ -0.19
SCNM1-202ENST00000368905 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
SCNM1-202ENST00000368905 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
SCNM1-202ENST00000368905 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
SCNM1-202ENST00000368905 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
SCNM1-202ENST00000368905 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
SCNM1-202ENST00000368905 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
SCNM1-202ENST00000368905 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
SCNM1-202ENST00000368905 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
SCNM1-202ENST00000368905 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
SCNM1-202ENST00000368905 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCNM1-202ENST00000368905 NEUROD2Q15784 382 aa13.81□□□□□ -0.2
SCNM1-202ENST00000368905 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
SCNM1-202ENST00000368905 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
SCNM1-202ENST00000368905 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
SCNM1-202ENST00000368905 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
SCNM1-202ENST00000368905 RBM10P98175 930 aaKnown RBP13.8□□□□□ -0.2
SCNM1-202ENST00000368905 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
SCNM1-202ENST00000368905 PRDM16Q9HAZ2 1276 aa13.78□□□□□ -0.2
SCNM1-202ENST00000368905 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
SCNM1-202ENST00000368905 ERICH6BQ5W0A0 696 aa13.77□□□□□ -0.21
SCNM1-202ENST00000368905 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.21
SCNM1-202ENST00000368905 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
SCNM1-202ENST00000368905 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
SCNM1-202ENST00000368905 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
SCNM1-202ENST00000368905 APBB1O00213 710 aa13.75□□□□□ -0.21
SCNM1-202ENST00000368905 DIEXFQ68CQ4 756 aaKnown RBP13.75□□□□□ -0.21
SCNM1-202ENST00000368905 FHOD3Q2V2M9 1422 aa13.75□□□□□ -0.21
SCNM1-202ENST00000368905 E9PSI1 815 aa13.74□□□□□ -0.21
SCNM1-202ENST00000368905 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
SCNM1-202ENST00000368905 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
SCNM1-202ENST00000368905 PLCD4Q9BRC7 762 aa13.74□□□□□ -0.21
SCNM1-202ENST00000368905 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
SCNM1-202ENST00000368905 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
SCNM1-202ENST00000368905 SETQ01105 290 aaPredicted RBP13.72□□□□□ -0.21
SCNM1-202ENST00000368905 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
SCNM1-202ENST00000368905 SAMD9Q5K651 1589 aa13.72□□□□□ -0.21
SCNM1-202ENST00000368905 MFAP1P55081 439 aaKnown RBP13.71□□□□□ -0.21
SCNM1-202ENST00000368905 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
SCNM1-202ENST00000368905 CCDC27Q2M243 656 aa13.71□□□□□ -0.22
SCNM1-202ENST00000368905 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
SCNM1-202ENST00000368905 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
SCNM1-202ENST00000368905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCNM1-202ENST00000368905 PTMSP20962 102 aa13.69□□□□□ -0.22
SCNM1-202ENST00000368905 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
SCNM1-202ENST00000368905 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
SCNM1-202ENST00000368905 CNPY4Q8N129 248 aa13.67□□□□□ -0.22
SCNM1-202ENST00000368905 GLIPR1L2Q4G1C9 344 aa13.66□□□□□ -0.22
SCNM1-202ENST00000368905 PHLDB1Q86UU1 1377 aa13.66□□□□□ -0.22
SCNM1-202ENST00000368905 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
SCNM1-202ENST00000368905 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
SCNM1-202ENST00000368905 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
SCNM1-202ENST00000368905 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
SCNM1-202ENST00000368905 ITGAEP38570 1179 aa13.63□□□□□ -0.23
SCNM1-202ENST00000368905 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
SCNM1-202ENST00000368905 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
SCNM1-202ENST00000368905 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
SCNM1-202ENST00000368905 CHD1O14646 1710 aa13.62□□□□□ -0.23
SCNM1-202ENST00000368905 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
SCNM1-202ENST00000368905 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
SCNM1-202ENST00000368905 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
SCNM1-202ENST00000368905 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
SCNM1-202ENST00000368905 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
SCNM1-202ENST00000368905 GRIN2AQ12879 1464 aa13.58□□□□□ -0.23
SCNM1-202ENST00000368905 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
SCNM1-202ENST00000368905 FGD6Q6ZV73 1430 aa13.58□□□□□ -0.24
SCNM1-202ENST00000368905 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.24
SCNM1-202ENST00000368905 KDM4AO75164 1064 aa13.57□□□□□ -0.24
SCNM1-202ENST00000368905 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
SCNM1-202ENST00000368905 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
SCNM1-202ENST00000368905 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
SCNM1-202ENST00000368905 MAFGO15525 162 aa13.56□□□□□ -0.24
SCNM1-202ENST00000368905 ANAPC15P60006 121 aa13.56□□□□□ -0.24
SCNM1-202ENST00000368905 GRIPAP1Q4V328 841 aa13.56□□□□□ -0.24
SCNM1-202ENST00000368905 SALL2Q9Y467 1007 aaPredicted RBP13.56□□□□□ -0.24
SCNM1-202ENST00000368905 UGGT2Q9NYU1 1516 aa13.56□□□□□ -0.24
SCNM1-202ENST00000368905 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms