RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 ADGRL2O95490 1459 aa14.46□□□□□ -0.09
TPM3-209ENST00000368527 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
TPM3-209ENST00000368527 ABCA8O94911 1581 aa14.46□□□□□ -0.09
TPM3-209ENST00000368527 ADGBQ8N7X0 1667 aa14.45□□□□□ -0.1
TPM3-209ENST00000368527 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
TPM3-209ENST00000368527 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
TPM3-209ENST00000368527 GPATCH8Q9UKJ3 1502 aaKnown RBP14.43□□□□□ -0.1
TPM3-209ENST00000368527 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
TPM3-209ENST00000368527 MPHOSPH9Q99550 1183 aa14.43□□□□□ -0.1
TPM3-209ENST00000368527 KIF14Q15058 1648 aa14.43□□□□□ -0.1
TPM3-209ENST00000368527 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
TPM3-209ENST00000368527 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
TPM3-209ENST00000368527 PLEKHD1A6NEE1 506 aa14.41□□□□□ -0.1
TPM3-209ENST00000368527 PLB1Q6P1J6 1458 aa14.41□□□□□ -0.1
TPM3-209ENST00000368527 ANKRD30AQ9BXX3 1397 aa14.4□□□□□ -0.1
TPM3-209ENST00000368527 ANP32CO43423 234 aa14.4□□□□□ -0.1
TPM3-209ENST00000368527 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
TPM3-209ENST00000368527 KDM5BQ9UGL1 1544 aa14.4□□□□□ -0.1
TPM3-209ENST00000368527 PRG4Q92954 1404 aaPredicted RBP14.4□□□□□ -0.1
TPM3-209ENST00000368527 CROCC2H7BZ55 1655 aa14.39□□□□□ -0.11
TPM3-209ENST00000368527 RPRD2Q5VT52 1461 aaKnown RBP14.39□□□□□ -0.11
TPM3-209ENST00000368527 FBLN2P98095 1184 aa14.38□□□□□ -0.11
TPM3-209ENST00000368527 NCOA1Q15788 1441 aa14.38□□□□□ -0.11
TPM3-209ENST00000368527 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
TPM3-209ENST00000368527 ANKRD30BQ9BXX2 1392 aa14.37□□□□□ -0.11
TPM3-209ENST00000368527 DDX10Q13206 875 aaKnown RBP14.37□□□□□ -0.11
TPM3-209ENST00000368527 RSPH4AQ5TD94 716 aa14.37□□□□□ -0.11
TPM3-209ENST00000368527 ABCC10Q5T3U5 1492 aa14.36□□□□□ -0.11
TPM3-209ENST00000368527 ARHGEF5Q12774 1597 aa14.35□□□□□ -0.11
TPM3-209ENST00000368527 KDM6BO15054 1643 aa14.35□□□□□ -0.11
TPM3-209ENST00000368527 ATP10BO94823 1461 aa14.35□□□□□ -0.11
TPM3-209ENST00000368527 PTPRGP23470 1445 aa14.34□□□□□ -0.11
TPM3-209ENST00000368527 EIF4G2P78344 907 aaKnown RBP eCLIP14.34□□□□□ -0.11
TPM3-209ENST00000368527 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
TPM3-209ENST00000368527 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
TPM3-209ENST00000368527 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
TPM3-209ENST00000368527 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
TPM3-209ENST00000368527 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
TPM3-209ENST00000368527 CDC42BPAQ5VT25 1732 aa14.3□□□□□ -0.12
TPM3-209ENST00000368527 PZPP20742 1482 aa14.3□□□□□ -0.12
TPM3-209ENST00000368527 TSPY4P0CV99 314 aa14.29□□□□□ -0.12
TPM3-209ENST00000368527 TSPY10P0CW01 314 aa14.29□□□□□ -0.12
TPM3-209ENST00000368527 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
TPM3-209ENST00000368527 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
TPM3-209ENST00000368527 ANKRD50Q9ULJ7 1429 aa14.29□□□□□ -0.12
TPM3-209ENST00000368527 PLEKHH2Q8IVE3 1493 aa14.29□□□□□ -0.12
TPM3-209ENST00000368527 TEX14Q8IWB6 1497 aa14.29□□□□□ -0.12
TPM3-209ENST00000368527 L3MBTL2Q969R5 705 aa14.27□□□□□ -0.13
TPM3-209ENST00000368527 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
TPM3-209ENST00000368527 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
TPM3-209ENST00000368527 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
TPM3-209ENST00000368527 HSPA5P11021 654 aaKnown RBP14.25□□□□□ -0.13
TPM3-209ENST00000368527 ARHGEF12Q9NZN5 1544 aa14.25□□□□□ -0.13
TPM3-209ENST00000368527 MAST1Q9Y2H9 1570 aa14.24□□□□□ -0.13
TPM3-209ENST00000368527 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
TPM3-209ENST00000368527 ABCC2Q92887 1545 aa14.23□□□□□ -0.13
TPM3-209ENST00000368527 CNTLNQ9NXG0 1405 aa14.23□□□□□ -0.13
TPM3-209ENST00000368527 CHD1O14646 1710 aa14.22□□□□□ -0.13
TPM3-209ENST00000368527 MBD5Q9P267 1494 aa14.22□□□□□ -0.13
TPM3-209ENST00000368527 UHRF1BP1LA0JNW5 1464 aa14.21□□□□□ -0.13
TPM3-209ENST00000368527 UHRF1BP1Q6BDS2 1440 aa14.21□□□□□ -0.13
TPM3-209ENST00000368527 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.14
TPM3-209ENST00000368527 CCDC7Q96M83 1385 aa14.2□□□□□ -0.14
TPM3-209ENST00000368527 KIF15Q9NS87 1388 aa14.2□□□□□ -0.14
TPM3-209ENST00000368527 WASHC2AQ641Q2 1341 aa14.19□□□□□ -0.14
TPM3-209ENST00000368527 SPATA31E1Q6ZUB1 1445 aa14.19□□□□□ -0.14
TPM3-209ENST00000368527 PKD2Q13563 968 aa14.18□□□□□ -0.14
TPM3-209ENST00000368527 NUP155O75694 1391 aa14.18□□□□□ -0.14
TPM3-209ENST00000368527 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
TPM3-209ENST00000368527 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
TPM3-209ENST00000368527 NEFLP07196 543 aa14.16□□□□□ -0.14
TPM3-209ENST00000368527 HIRIP3Q9BW71 556 aaPredicted RBP14.16□□□□□ -0.14
TPM3-209ENST00000368527 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
TPM3-209ENST00000368527 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
TPM3-209ENST00000368527 RALGAPBQ86X10 1494 aa14.15□□□□□ -0.14
TPM3-209ENST00000368527 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.14
TPM3-209ENST00000368527 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
TPM3-209ENST00000368527 ARAP3Q8WWN8 1544 aa14.15□□□□□ -0.14
TPM3-209ENST00000368527 MYO5CQ9NQX4 1742 aa14.14□□□□□ -0.15
TPM3-209ENST00000368527 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
TPM3-209ENST00000368527 UNC13BO14795 1591 aa14.13□□□□□ -0.15
TPM3-209ENST00000368527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.12□□□□□ -0.153e-7■□□□□ 8.5
TPM3-209ENST00000368527 NBPF8Q3BBV2 869 aa14.12□□□□□ -0.15
TPM3-209ENST00000368527 DUOX2Q9NRD8 1548 aa14.11□□□□□ -0.15
TPM3-209ENST00000368527 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
TPM3-209ENST00000368527 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
TPM3-209ENST00000368527 PLCH2O75038 1416 aa14.1□□□□□ -0.15
TPM3-209ENST00000368527 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
TPM3-209ENST00000368527 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.157e-7■■■□□ 16.5
TPM3-209ENST00000368527 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
TPM3-209ENST00000368527 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
TPM3-209ENST00000368527 KTN1Q86UP2 1357 aaKnown RBP14.09□□□□□ -0.15
TPM3-209ENST00000368527 USP47Q96K76 1375 aa14.09□□□□□ -0.15
TPM3-209ENST00000368527 ATP10AO60312 1499 aa14.08□□□□□ -0.16
TPM3-209ENST00000368527 SYCP2Q9BX26 1530 aa14.08□□□□□ -0.16
TPM3-209ENST00000368527 ERICH6BQ5W0A0 696 aa14.07□□□□□ -0.16
TPM3-209ENST00000368527 PRKRIP1Q9H875 184 aaPredicted RBP14.07□□□□□ -0.16
TPM3-209ENST00000368527 KDM5CP41229 1560 aa14.07□□□□□ -0.16
TPM3-209ENST00000368527 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
TPM3-209ENST00000368527 IQGAP3Q86VI3 1631 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms