RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CCER2I3L3R5 266 aa16.14■□□□□ 0.17
PTPRK-203ENST00000368207 NBR1Q14596 966 aa16.14■□□□□ 0.17
PTPRK-203ENST00000368207 PTPRGP23470 1445 aa16.14■□□□□ 0.17
PTPRK-203ENST00000368207 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
PTPRK-203ENST00000368207 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
PTPRK-203ENST00000368207 AQRO60306 1485 aaKnown RBP eCLIP16.13■□□□□ 0.179e-8■■■■■ 30.5
PTPRK-203ENST00000368207 SOX12O15370 315 aa16.11■□□□□ 0.17
PTPRK-203ENST00000368207 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
PTPRK-203ENST00000368207 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
PTPRK-203ENST00000368207 NESP48681 1621 aa16.09■□□□□ 0.17
PTPRK-203ENST00000368207 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
PTPRK-203ENST00000368207 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
PTPRK-203ENST00000368207 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
PTPRK-203ENST00000368207 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.17
PTPRK-203ENST00000368207 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
PTPRK-203ENST00000368207 SYNJ1O43426 1573 aa16.08■□□□□ 0.16
PTPRK-203ENST00000368207 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
PTPRK-203ENST00000368207 CFTRP13569 1480 aa16.08■□□□□ 0.16
PTPRK-203ENST00000368207 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
PTPRK-203ENST00000368207 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
PTPRK-203ENST00000368207 ZNF644Q9H582 1327 aaPredicted RBP16.06■□□□□ 0.16
PTPRK-203ENST00000368207 KIF21BO75037 1637 aa16.06■□□□□ 0.16
PTPRK-203ENST00000368207 HDGFP51858 240 aaKnown RBP16.04■□□□□ 0.16
PTPRK-203ENST00000368207 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
PTPRK-203ENST00000368207 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
PTPRK-203ENST00000368207 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
PTPRK-203ENST00000368207 RGS3P49796 1198 aa16.03■□□□□ 0.16
PTPRK-203ENST00000368207 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.15
PTPRK-203ENST00000368207 ARXQ96QS3 562 aa16.01■□□□□ 0.15
PTPRK-203ENST00000368207 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
PTPRK-203ENST00000368207 ARAP1Q96P48 1450 aa16■□□□□ 0.15
PTPRK-203ENST00000368207 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
PTPRK-203ENST00000368207 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
PTPRK-203ENST00000368207 RALBP1Q15311 655 aa15.96■□□□□ 0.15
PTPRK-203ENST00000368207 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.14
PTPRK-203ENST00000368207 CCDC144AA2RUR9 1427 aa15.95■□□□□ 0.14
PTPRK-203ENST00000368207 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
PTPRK-203ENST00000368207 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
PTPRK-203ENST00000368207 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
PTPRK-203ENST00000368207 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
PTPRK-203ENST00000368207 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPRK-203ENST00000368207 CUX1P39880 1505 aa15.93■□□□□ 0.14
PTPRK-203ENST00000368207 ANP32BQ92688 251 aaKnown RBP15.92■□□□□ 0.14
PTPRK-203ENST00000368207 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
PTPRK-203ENST00000368207 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
PTPRK-203ENST00000368207 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
PTPRK-203ENST00000368207 CASKIN1Q8WXD9 1431 aa15.91■□□□□ 0.14
PTPRK-203ENST00000368207 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
PTPRK-203ENST00000368207 ERICH3Q5RHP9 1530 aa15.9■□□□□ 0.14
PTPRK-203ENST00000368207 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
PTPRK-203ENST00000368207 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
PTPRK-203ENST00000368207 BECN1Q14457 450 aa15.89■□□□□ 0.13
PTPRK-203ENST00000368207 NLRP13Q86W25 1043 aa15.89■□□□□ 0.13
PTPRK-203ENST00000368207 DDRGK1Q96HY6 314 aa15.88■□□□□ 0.13
PTPRK-203ENST00000368207 NUTM2FA1L443 756 aa15.88■□□□□ 0.13
PTPRK-203ENST00000368207 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
PTPRK-203ENST00000368207 NCOA2Q15596 1464 aa15.88■□□□□ 0.13
PTPRK-203ENST00000368207 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
PTPRK-203ENST00000368207 RCAN3Q9UKA8 241 aa15.88■□□□□ 0.13
PTPRK-203ENST00000368207 PANK3Q9H999 370 aa15.87■□□□□ 0.13
PTPRK-203ENST00000368207 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
PTPRK-203ENST00000368207 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
PTPRK-203ENST00000368207 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
PTPRK-203ENST00000368207 USP47Q96K76 1375 aa15.86■□□□□ 0.13
PTPRK-203ENST00000368207 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
PTPRK-203ENST00000368207 MS4A1P11836 297 aa15.85■□□□□ 0.13
PTPRK-203ENST00000368207 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
PTPRK-203ENST00000368207 TERF2IPQ9NYB0 399 aa15.83■□□□□ 0.13
PTPRK-203ENST00000368207 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
PTPRK-203ENST00000368207 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
PTPRK-203ENST00000368207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.81■□□□□ 0.121e-6■■■□□ 16.3
PTPRK-203ENST00000368207 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
PTPRK-203ENST00000368207 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
PTPRK-203ENST00000368207 ANKRD50Q9ULJ7 1429 aa15.8■□□□□ 0.12
PTPRK-203ENST00000368207 FYCO1Q9BQS8 1478 aa15.8■□□□□ 0.12
PTPRK-203ENST00000368207 EID1Q9Y6B2 187 aa15.8■□□□□ 0.12
PTPRK-203ENST00000368207 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-203ENST00000368207 CHMP4BQ9H444 224 aaKnown RBP15.79■□□□□ 0.12
PTPRK-203ENST00000368207 VGFO15240 615 aaPredicted RBP15.78■□□□□ 0.12
PTPRK-203ENST00000368207 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
PTPRK-203ENST00000368207 FAM69CQ0P6D2 419 aa15.78■□□□□ 0.12
PTPRK-203ENST00000368207 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
PTPRK-203ENST00000368207 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.12
PTPRK-203ENST00000368207 CASC1Q6TDU7 716 aa15.77■□□□□ 0.12
PTPRK-203ENST00000368207 RRBP1Q9P2E9 1410 aaKnown RBP15.77■□□□□ 0.11
PTPRK-203ENST00000368207 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.11
PTPRK-203ENST00000368207 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
PTPRK-203ENST00000368207 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
PTPRK-203ENST00000368207 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
PTPRK-203ENST00000368207 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
PTPRK-203ENST00000368207 CLUAP1Q96AJ1 413 aa15.75■□□□□ 0.11
PTPRK-203ENST00000368207 APBB1O00213 710 aa15.74■□□□□ 0.11
PTPRK-203ENST00000368207 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
PTPRK-203ENST00000368207 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
PTPRK-203ENST00000368207 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
PTPRK-203ENST00000368207 IPO8O15397 1037 aaKnown RBP15.72■□□□□ 0.11
PTPRK-203ENST00000368207 KIF7Q2M1P5 1343 aa15.72■□□□□ 0.11
PTPRK-203ENST00000368207 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
PTPRK-203ENST00000368207 TPRNQ4KMQ1 711 aa15.72■□□□□ 0.11
PTPRK-203ENST00000368207 ITPRIPQ8IWB1 547 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms