RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
SNHG28-201ENST00000368102 DAPK1P53355 1430 aa19.92■□□□□ 0.78
SNHG28-201ENST00000368102 KDM6BO15054 1643 aa19.9■□□□□ 0.78
SNHG28-201ENST00000368102 ABCC5O15440 1437 aa19.9■□□□□ 0.78
SNHG28-201ENST00000368102 CHD1O14646 1710 aa19.89■□□□□ 0.77
SNHG28-201ENST00000368102 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
SNHG28-201ENST00000368102 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
SNHG28-201ENST00000368102 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
SNHG28-201ENST00000368102 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
SNHG28-201ENST00000368102 BCANQ96GW7 911 aa19.86■□□□□ 0.77
SNHG28-201ENST00000368102 DNMT1P26358 1616 aaKnown RBP19.86■□□□□ 0.77
SNHG28-201ENST00000368102 MPHOSPH9Q99550 1183 aa19.85■□□□□ 0.77
SNHG28-201ENST00000368102 GPATCH8Q9UKJ3 1502 aaKnown RBP19.84■□□□□ 0.77
SNHG28-201ENST00000368102 ABCA8O94911 1581 aa19.83■□□□□ 0.77
SNHG28-201ENST00000368102 KIF14Q15058 1648 aa19.83■□□□□ 0.76
SNHG28-201ENST00000368102 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
SNHG28-201ENST00000368102 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
SNHG28-201ENST00000368102 ZNF777Q9ULD5 760 aaPredicted RBP19.81■□□□□ 0.76
SNHG28-201ENST00000368102 FOXD1Q16676 465 aa19.81■□□□□ 0.76
SNHG28-201ENST00000368102 ATP10BO94823 1461 aa19.81■□□□□ 0.76
SNHG28-201ENST00000368102 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
SNHG28-201ENST00000368102 KDM5BQ9UGL1 1544 aa19.79■□□□□ 0.76
SNHG28-201ENST00000368102 ANP32EQ9BTT0 268 aa19.78■□□□□ 0.76
SNHG28-201ENST00000368102 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
SNHG28-201ENST00000368102 PTPRGP23470 1445 aa19.77■□□□□ 0.76
SNHG28-201ENST00000368102 ANP32CO43423 234 aa19.75■□□□□ 0.75
SNHG28-201ENST00000368102 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
SNHG28-201ENST00000368102 ERCC6L2Q5T890 1561 aa19.73■□□□□ 0.75
SNHG28-201ENST00000368102 FKBP8Q14318 412 aa19.73■□□□□ 0.75
SNHG28-201ENST00000368102 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
SNHG28-201ENST00000368102 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
SNHG28-201ENST00000368102 ANKRD30BQ9BXX2 1392 aa19.71■□□□□ 0.75
SNHG28-201ENST00000368102 L3MBTL2Q969R5 705 aa19.69■□□□□ 0.74
SNHG28-201ENST00000368102 ADGRL2O95490 1459 aa19.69■□□□□ 0.74
SNHG28-201ENST00000368102 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
SNHG28-201ENST00000368102 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
SNHG28-201ENST00000368102 CDC42BPAQ5VT25 1732 aa19.66■□□□□ 0.74
SNHG28-201ENST00000368102 ADGBQ8N7X0 1667 aa19.65■□□□□ 0.74
SNHG28-201ENST00000368102 RPRD2Q5VT52 1461 aaKnown RBP19.65■□□□□ 0.74
SNHG28-201ENST00000368102 PZPP20742 1482 aa19.64■□□□□ 0.73
SNHG28-201ENST00000368102 CROCC2H7BZ55 1655 aa19.64■□□□□ 0.73
SNHG28-201ENST00000368102 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
SNHG28-201ENST00000368102 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
SNHG28-201ENST00000368102 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
SNHG28-201ENST00000368102 ANKRD50Q9ULJ7 1429 aa19.61■□□□□ 0.73
SNHG28-201ENST00000368102 C9orf84Q5VXU9 1444 aa19.6■□□□□ 0.73
SNHG28-201ENST00000368102 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
SNHG28-201ENST00000368102 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
SNHG28-201ENST00000368102 HNRNPMP52272 730 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNHG28-201ENST00000368102 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
SNHG28-201ENST00000368102 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
SNHG28-201ENST00000368102 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.73
SNHG28-201ENST00000368102 TEX14Q8IWB6 1497 aa19.57■□□□□ 0.72
SNHG28-201ENST00000368102 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
SNHG28-201ENST00000368102 NBPF8Q3BBV2 869 aa19.56■□□□□ 0.72
SNHG28-201ENST00000368102 PKD2Q13563 968 aa19.56■□□□□ 0.72
SNHG28-201ENST00000368102 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
SNHG28-201ENST00000368102 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
SNHG28-201ENST00000368102 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
SNHG28-201ENST00000368102 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNHG28-201ENST00000368102 NEFLP07196 543 aa19.53■□□□□ 0.72
SNHG28-201ENST00000368102 ARHGEF5Q12774 1597 aa19.52■□□□□ 0.72
SNHG28-201ENST00000368102 NUP155O75694 1391 aa19.52■□□□□ 0.72
SNHG28-201ENST00000368102 CLASP1Q7Z460 1538 aa19.52■□□□□ 0.71
SNHG28-201ENST00000368102 ABCC2Q92887 1545 aa19.52■□□□□ 0.71
SNHG28-201ENST00000368102 IRX6P78412 446 aaPredicted RBP19.52■□□□□ 0.71
SNHG28-201ENST00000368102 KIF15Q9NS87 1388 aa19.52■□□□□ 0.71
SNHG28-201ENST00000368102 SAMD9LQ8IVG5 1584 aa19.51■□□□□ 0.71
SNHG28-201ENST00000368102 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
SNHG28-201ENST00000368102 CDC42BPBQ9Y5S2 1711 aa19.5■□□□□ 0.71
SNHG28-201ENST00000368102 CCDC141Q6ZP82 1450 aa19.49■□□□□ 0.71
SNHG28-201ENST00000368102 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
SNHG28-201ENST00000368102 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
SNHG28-201ENST00000368102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
SNHG28-201ENST00000368102 TTC37Q6PGP7 1564 aa19.47■□□□□ 0.71
SNHG28-201ENST00000368102 ARHGAP5Q13017 1502 aa19.45■□□□□ 0.7
SNHG28-201ENST00000368102 RBM19Q9Y4C8 960 aaKnown RBP19.44■□□□□ 0.7
SNHG28-201ENST00000368102 SYCP2Q9BX26 1530 aa19.43■□□□□ 0.7
SNHG28-201ENST00000368102 KDM5DQ9BY66 1539 aa19.43■□□□□ 0.7
SNHG28-201ENST00000368102 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
SNHG28-201ENST00000368102 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
SNHG28-201ENST00000368102 SPATA31E1Q6ZUB1 1445 aa19.41■□□□□ 0.7
SNHG28-201ENST00000368102 CCDC7Q96M83 1385 aa19.41■□□□□ 0.7
SNHG28-201ENST00000368102 FAM9BQ8IZU0 186 aa19.4■□□□□ 0.7
SNHG28-201ENST00000368102 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
SNHG28-201ENST00000368102 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
SNHG28-201ENST00000368102 POLR3GLQ9BT43 218 aa19.38■□□□□ 0.69
SNHG28-201ENST00000368102 KIF7Q2M1P5 1343 aa19.37■□□□□ 0.69
SNHG28-201ENST00000368102 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
SNHG28-201ENST00000368102 PRKRIP1Q9H875 184 aaPredicted RBP19.36■□□□□ 0.69
SNHG28-201ENST00000368102 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
SNHG28-201ENST00000368102 PLEKHH2Q8IVE3 1493 aa19.36■□□□□ 0.69
SNHG28-201ENST00000368102 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
SNHG28-201ENST00000368102 PLCH2O75038 1416 aa19.35■□□□□ 0.69
SNHG28-201ENST00000368102 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
SNHG28-201ENST00000368102 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
SNHG28-201ENST00000368102 FAM135AQ9P2D6 1515 aa19.34■□□□□ 0.69
SNHG28-201ENST00000368102 ARHGEF12Q9NZN5 1544 aa19.33■□□□□ 0.69
SNHG28-201ENST00000368102 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
SNHG28-201ENST00000368102 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms