RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
PRKN-206ENST00000366898 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
PRKN-206ENST00000366898 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
PRKN-206ENST00000366898 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
PRKN-206ENST00000366898 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
PRKN-206ENST00000366898 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRKN-206ENST00000366898 GSE1Q14687 1217 aa15.38■□□□□ 0.05
PRKN-206ENST00000366898 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
PRKN-206ENST00000366898 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
PRKN-206ENST00000366898 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
PRKN-206ENST00000366898 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
PRKN-206ENST00000366898 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 PAK3O75914 559 aaPredicted RBP15.36■□□□□ 0.05
PRKN-206ENST00000366898 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 GZF1Q9H116 711 aaPredicted RBP15.36■□□□□ 0.05
PRKN-206ENST00000366898 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
PRKN-206ENST00000366898 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 PLEKHD1A6NEE1 506 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 ZMYND15Q9H091 742 aa15.35■□□□□ 0.05
PRKN-206ENST00000366898 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
PRKN-206ENST00000366898 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.05
PRKN-206ENST00000366898 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
PRKN-206ENST00000366898 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
PRKN-206ENST00000366898 FGD6Q6ZV73 1430 aa15.33■□□□□ 0.04
PRKN-206ENST00000366898 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
PRKN-206ENST00000366898 BECN1Q14457 450 aa15.32■□□□□ 0.04
PRKN-206ENST00000366898 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
PRKN-206ENST00000366898 SLC4A3P48751 1232 aa15.3■□□□□ 0.04
PRKN-206ENST00000366898 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
PRKN-206ENST00000366898 USP35Q9P2H5 1018 aa15.29■□□□□ 0.04
PRKN-206ENST00000366898 RGS3P49796 1198 aa15.29■□□□□ 0.04
PRKN-206ENST00000366898 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
PRKN-206ENST00000366898 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
PRKN-206ENST00000366898 PTMAP06454 111 aaKnown RBP15.25■□□□□ 0.03
PRKN-206ENST00000366898 PKD2Q13563 968 aa15.25■□□□□ 0.03
PRKN-206ENST00000366898 NCOA2Q15596 1464 aa15.25■□□□□ 0.03
PRKN-206ENST00000366898 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
PRKN-206ENST00000366898 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
PRKN-206ENST00000366898 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
PRKN-206ENST00000366898 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
PRKN-206ENST00000366898 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
PRKN-206ENST00000366898 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
PRKN-206ENST00000366898 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
PRKN-206ENST00000366898 PDE4CQ08493 712 aa15.22■□□□□ 0.03
PRKN-206ENST00000366898 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
PRKN-206ENST00000366898 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
PRKN-206ENST00000366898 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
PRKN-206ENST00000366898 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
PRKN-206ENST00000366898 CCER2I3L3R5 266 aa15.2■□□□□ 0.02
PRKN-206ENST00000366898 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
PRKN-206ENST00000366898 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
PRKN-206ENST00000366898 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
PRKN-206ENST00000366898 HNRNPMP52272 730 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRKN-206ENST00000366898 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
PRKN-206ENST00000366898 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
PRKN-206ENST00000366898 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRKN-206ENST00000366898 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
PRKN-206ENST00000366898 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
PRKN-206ENST00000366898 UACAQ9BZF9 1416 aa15.16■□□□□ 0.02
PRKN-206ENST00000366898 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
PRKN-206ENST00000366898 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
PRKN-206ENST00000366898 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
PRKN-206ENST00000366898 MYH16Q9H6N6 1097 aa15.14■□□□□ 0.01
PRKN-206ENST00000366898 NUP155O75694 1391 aa15.13■□□□□ 0.01
PRKN-206ENST00000366898 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
PRKN-206ENST00000366898 MAPKBP1O60336 1514 aa15.12■□□□□ 0.01
PRKN-206ENST00000366898 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
PRKN-206ENST00000366898 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
PRKN-206ENST00000366898 TPRNQ4KMQ1 711 aa15.11■□□□□ 0.01
PRKN-206ENST00000366898 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
PRKN-206ENST00000366898 GOLGA6L22H0YM25 854 aa15.1■□□□□ 0.01
PRKN-206ENST00000366898 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
PRKN-206ENST00000366898 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
PRKN-206ENST00000366898 NAIPQ13075 1403 aa15.1■□□□□ 0.01
PRKN-206ENST00000366898 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
PRKN-206ENST00000366898 TCERG1O14776 1098 aaKnown RBP15.09■□□□□ 0.01
PRKN-206ENST00000366898 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
PRKN-206ENST00000366898 HFM1A2PYH4 1435 aa15.08■□□□□ 0
PRKN-206ENST00000366898 KIF21AQ7Z4S6 1674 aa15.08■□□□□ 0
PRKN-206ENST00000366898 PLCB2Q00722 1185 aa15.08■□□□□ 0
PRKN-206ENST00000366898 NBPF8Q3BBV2 869 aa15.08■□□□□ 0
PRKN-206ENST00000366898 CCDC184Q52MB2 194 aa15.08■□□□□ 0
PRKN-206ENST00000366898 CARMIL2Q6F5E8 1435 aa15.07■□□□□ 0
PRKN-206ENST00000366898 PDE4AP27815 886 aa15.07■□□□□ 0
PRKN-206ENST00000366898 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
PRKN-206ENST00000366898 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
PRKN-206ENST00000366898 GRIN2BQ13224 1484 aa15.05■□□□□ 0
PRKN-206ENST00000366898 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
PRKN-206ENST00000366898 FAM43AQ8N2R8 423 aa15.05■□□□□ -0
PRKN-206ENST00000366898 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
PRKN-206ENST00000366898 ZNF608Q9ULD9 1512 aaPredicted RBP15.04■□□□□ -0
PRKN-206ENST00000366898 ANKRD30AQ9BXX3 1397 aa15.04■□□□□ -0
PRKN-206ENST00000366898 MAP3K1Q13233 1512 aa15.04■□□□□ -0
PRKN-206ENST00000366898 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
PRKN-206ENST00000366898 RBM10P98175 930 aaKnown RBP15.03■□□□□ -0
PRKN-206ENST00000366898 C11orf95C9JLR9 678 aaPredicted RBP15.02■□□□□ -0
PRKN-206ENST00000366898 ST20-MTHFSA0A0A6YYL1 179 aa15.02□□□□□ -0.01
PRKN-206ENST00000366898 EPRSP07814 1512 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms