RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
PRKN-205ENST00000366897 ARID3CA6NKF2 412 aa18.79■□□□□ 0.6
PRKN-205ENST00000366897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRKN-205ENST00000366897 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
PRKN-205ENST00000366897 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
PRKN-205ENST00000366897 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
PRKN-205ENST00000366897 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
PRKN-205ENST00000366897 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
PRKN-205ENST00000366897 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
PRKN-205ENST00000366897 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.596e-6■■■■□ 25.1
PRKN-205ENST00000366897 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
PRKN-205ENST00000366897 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
PRKN-205ENST00000366897 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 MYOM3Q5VTT5 1437 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
PRKN-205ENST00000366897 IQGAP2Q13576 1575 aa18.69■□□□□ 0.58
PRKN-205ENST00000366897 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
PRKN-205ENST00000366897 DENND4BO75064 1496 aaPredicted RBP18.66■□□□□ 0.58
PRKN-205ENST00000366897 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
PRKN-205ENST00000366897 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
PRKN-205ENST00000366897 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.58
PRKN-205ENST00000366897 POLR3GLQ9BT43 218 aa18.64■□□□□ 0.58
PRKN-205ENST00000366897 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
PRKN-205ENST00000366897 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
PRKN-205ENST00000366897 KDM6BO15054 1643 aa18.62■□□□□ 0.57
PRKN-205ENST00000366897 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
PRKN-205ENST00000366897 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
PRKN-205ENST00000366897 CTTNBP2Q8WZ74 1663 aa18.61■□□□□ 0.57
PRKN-205ENST00000366897 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
PRKN-205ENST00000366897 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
PRKN-205ENST00000366897 NBR1Q14596 966 aa18.59■□□□□ 0.57
PRKN-205ENST00000366897 PTPRGP23470 1445 aa18.58■□□□□ 0.57
PRKN-205ENST00000366897 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.56
PRKN-205ENST00000366897 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
PRKN-205ENST00000366897 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
PRKN-205ENST00000366897 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
PRKN-205ENST00000366897 SUPT6HQ7KZ85 1726 aaKnown RBP18.55■□□□□ 0.56
PRKN-205ENST00000366897 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
PRKN-205ENST00000366897 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
PRKN-205ENST00000366897 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
PRKN-205ENST00000366897 ERICH6BQ5W0A0 696 aa18.54■□□□□ 0.56
PRKN-205ENST00000366897 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
PRKN-205ENST00000366897 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.56
PRKN-205ENST00000366897 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
PRKN-205ENST00000366897 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
PRKN-205ENST00000366897 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKN-205ENST00000366897 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
PRKN-205ENST00000366897 SAMD9Q5K651 1589 aa18.49■□□□□ 0.55
PRKN-205ENST00000366897 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
PRKN-205ENST00000366897 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
PRKN-205ENST00000366897 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
PRKN-205ENST00000366897 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
PRKN-205ENST00000366897 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
PRKN-205ENST00000366897 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
PRKN-205ENST00000366897 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
PRKN-205ENST00000366897 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
PRKN-205ENST00000366897 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
PRKN-205ENST00000366897 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
PRKN-205ENST00000366897 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 TEX14Q8IWB6 1497 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 SPATA31E1Q6ZUB1 1445 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
PRKN-205ENST00000366897 EPRSP07814 1512 aaKnown RBP18.39■□□□□ 0.54
PRKN-205ENST00000366897 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
PRKN-205ENST00000366897 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
PRKN-205ENST00000366897 FAM69CQ0P6D2 419 aa18.36■□□□□ 0.53
PRKN-205ENST00000366897 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
PRKN-205ENST00000366897 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
PRKN-205ENST00000366897 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
PRKN-205ENST00000366897 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
PRKN-205ENST00000366897 DAPK1P53355 1430 aa18.34■□□□□ 0.53
PRKN-205ENST00000366897 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.53
PRKN-205ENST00000366897 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.53
PRKN-205ENST00000366897 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
PRKN-205ENST00000366897 USP47Q96K76 1375 aa18.33■□□□□ 0.52
PRKN-205ENST00000366897 ABCC5O15440 1437 aa18.33■□□□□ 0.52
PRKN-205ENST00000366897 KIF13AQ9H1H9 1805 aa18.32■□□□□ 0.52
PRKN-205ENST00000366897 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
PRKN-205ENST00000366897 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
PRKN-205ENST00000366897 ABCA8O94911 1581 aa18.31■□□□□ 0.52
PRKN-205ENST00000366897 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
PRKN-205ENST00000366897 PNISRQ8TF01 805 aaKnown RBP18.29■□□□□ 0.52
PRKN-205ENST00000366897 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
PRKN-205ENST00000366897 PKD2Q13563 968 aa18.28■□□□□ 0.52
PRKN-205ENST00000366897 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
PRKN-205ENST00000366897 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
PRKN-205ENST00000366897 KDM2AQ9Y2K7 1162 aa18.28■□□□□ 0.52
PRKN-205ENST00000366897 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
PRKN-205ENST00000366897 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
PRKN-205ENST00000366897 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.51
PRKN-205ENST00000366897 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
PRKN-205ENST00000366897 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
PRKN-205ENST00000366897 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
PRKN-205ENST00000366897 PZPP20742 1482 aa18.24■□□□□ 0.51
PRKN-205ENST00000366897 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
PRKN-205ENST00000366897 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
PRKN-205ENST00000366897 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
PRKN-205ENST00000366897 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
PRKN-205ENST00000366897 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms