RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 AFAP1Q8N556 730 aa10.6□□□□□ -0.71
RNU1-55P-201ENST00000365510 PHLDB1Q86UU1 1377 aa10.6□□□□□ -0.71
RNU1-55P-201ENST00000365510 CDK13Q14004 1512 aaKnown RBP10.59□□□□□ -0.71
RNU1-55P-201ENST00000365510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.59□□□□□ -0.71
RNU1-55P-201ENST00000365510 APLP2Q06481 763 aa10.59□□□□□ -0.71
RNU1-55P-201ENST00000365510 CERKQ8TCT0 537 aa10.59□□□□□ -0.71
RNU1-55P-201ENST00000365510 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
RNU1-55P-201ENST00000365510 FANCAO15360 1455 aa10.58□□□□□ -0.72
RNU1-55P-201ENST00000365510 SCAPERQ9BY12 1400 aa10.58□□□□□ -0.72
RNU1-55P-201ENST00000365510 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
RNU1-55P-201ENST00000365510 TTC37Q6PGP7 1564 aa10.56□□□□□ -0.72
RNU1-55P-201ENST00000365510 RICTORQ6R327 1708 aa10.56□□□□□ -0.72
RNU1-55P-201ENST00000365510 ILDR2Q71H61 639 aa10.56□□□□□ -0.72
RNU1-55P-201ENST00000365510 MAP3K1Q13233 1512 aa10.56□□□□□ -0.72
RNU1-55P-201ENST00000365510 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
RNU1-55P-201ENST00000365510 PLCH2O75038 1416 aa10.52□□□□□ -0.73
RNU1-55P-201ENST00000365510 EFCAB2Q5VUJ9 269 aa10.52□□□□□ -0.73
RNU1-55P-201ENST00000365510 ZFYVE16Q7Z3T8 1539 aa10.52□□□□□ -0.73
RNU1-55P-201ENST00000365510 ARHGEF40Q8TER5 1519 aa10.52□□□□□ -0.73
RNU1-55P-201ENST00000365510 LRRIQ1Q96JM4 1722 aa10.51□□□□□ -0.73
RNU1-55P-201ENST00000365510 EHBP1L1Q8N3D4 1523 aa10.5□□□□□ -0.73
RNU1-55P-201ENST00000365510 ATP10AO60312 1499 aa10.49□□□□□ -0.73
RNU1-55P-201ENST00000365510 LRRC9Q6ZRR7 1453 aa10.49□□□□□ -0.73
RNU1-55P-201ENST00000365510 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
RNU1-55P-201ENST00000365510 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
RNU1-55P-201ENST00000365510 POGZQ7Z3K3 1410 aa10.49□□□□□ -0.73
RNU1-55P-201ENST00000365510 KIF14Q15058 1648 aa10.48□□□□□ -0.73
RNU1-55P-201ENST00000365510 ZNF777Q9ULD5 760 aaPredicted RBP10.48□□□□□ -0.73
RNU1-55P-201ENST00000365510 FER1L4A9Z1Z3 1794 aa10.47□□□□□ -0.73
RNU1-55P-201ENST00000365510 STRCQ7RTU9 1775 aa10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 ZMYM4Q5VZL5 1548 aa10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 ARHGEF12Q9NZN5 1544 aa10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 TRAPPC8Q9Y2L5 1435 aa10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 DISP3Q9P2K9 1392 aa10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
RNU1-55P-201ENST00000365510 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
RNU1-55P-201ENST00000365510 PPARGC1BQ86YN6 1023 aaKnown RBP10.44□□□□□ -0.74
RNU1-55P-201ENST00000365510 SUPT6HQ7KZ85 1726 aaKnown RBP10.44□□□□□ -0.74
RNU1-55P-201ENST00000365510 C9orf84Q5VXU9 1444 aa10.43□□□□□ -0.74
RNU1-55P-201ENST00000365510 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
RNU1-55P-201ENST00000365510 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
RNU1-55P-201ENST00000365510 CFAP74Q9C0B2 1584 aa10.41□□□□□ -0.74
RNU1-55P-201ENST00000365510 NCOA2Q15596 1464 aa10.41□□□□□ -0.74
RNU1-55P-201ENST00000365510 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
RNU1-55P-201ENST00000365510 CDC42BPBQ9Y5S2 1711 aa10.39□□□□□ -0.75
RNU1-55P-201ENST00000365510 ESF1Q9H501 851 aaKnown RBP10.39□□□□□ -0.75
RNU1-55P-201ENST00000365510 DIP2CQ9Y2E4 1556 aa10.39□□□□□ -0.75
RNU1-55P-201ENST00000365510 ZNF644Q9H582 1327 aaPredicted RBP10.38□□□□□ -0.75
RNU1-55P-201ENST00000365510 SETD1BQ9UPS6 1966 aaKnown RBP10.38□□□□□ -0.75
RNU1-55P-201ENST00000365510 ZNF335Q9H4Z2 1342 aaPredicted RBP10.37□□□□□ -0.75
RNU1-55P-201ENST00000365510 ABCA6Q8N139 1617 aa10.37□□□□□ -0.75
RNU1-55P-201ENST00000365510 UHRF1BP1Q6BDS2 1440 aa10.37□□□□□ -0.75
RNU1-55P-201ENST00000365510 GGT6Q6P531 493 aa10.37□□□□□ -0.75
RNU1-55P-201ENST00000365510 DMRT2Q9Y5R5 561 aa10.37□□□□□ -0.75
RNU1-55P-201ENST00000365510 PREX1Q8TCU6 1659 aa10.37□□□□□ -0.75
RNU1-55P-201ENST00000365510 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
RNU1-55P-201ENST00000365510 SOCS7O14512 581 aa10.36□□□□□ -0.75
RNU1-55P-201ENST00000365510 C3P01024 1663 aa10.36□□□□□ -0.75
RNU1-55P-201ENST00000365510 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
RNU1-55P-201ENST00000365510 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
RNU1-55P-201ENST00000365510 ITSN2Q9NZM3 1697 aa10.35□□□□□ -0.75
RNU1-55P-201ENST00000365510 SENP3Q9H4L4 574 aaPredicted RBP10.35□□□□□ -0.75
RNU1-55P-201ENST00000365510 ZMYM3Q14202 1370 aa10.35□□□□□ -0.75
RNU1-55P-201ENST00000365510 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
RNU1-55P-201ENST00000365510 KDM5CP41229 1560 aa10.34□□□□□ -0.75
RNU1-55P-201ENST00000365510 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 LTBP4Q8N2S1 1624 aa10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 FBXO31Q5XUX0 539 aaPredicted RBP10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 KIDINS220Q9ULH0 1771 aa10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
RNU1-55P-201ENST00000365510 TRIM26Q12899 539 aaPredicted RBP10.32□□□□□ -0.76
RNU1-55P-201ENST00000365510 PREX2Q70Z35 1606 aa10.32□□□□□ -0.76
RNU1-55P-201ENST00000365510 GPATCH8Q9UKJ3 1502 aaKnown RBP10.32□□□□□ -0.76
RNU1-55P-201ENST00000365510 PTPRTO14522 1441 aa10.32□□□□□ -0.76
RNU1-55P-201ENST00000365510 CFDP1Q9UEE9 299 aaPredicted RBP10.31□□□□□ -0.76
RNU1-55P-201ENST00000365510 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
RNU1-55P-201ENST00000365510 ABCC1P33527 1531 aa10.3□□□□□ -0.76
RNU1-55P-201ENST00000365510 NCOA1Q15788 1441 aa10.3□□□□□ -0.76
RNU1-55P-201ENST00000365510 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
RNU1-55P-201ENST00000365510 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
RNU1-55P-201ENST00000365510 PIP4K2BP78356 416 aa10.29□□□□□ -0.76
RNU1-55P-201ENST00000365510 SAMD9LQ8IVG5 1584 aa10.29□□□□□ -0.76
RNU1-55P-201ENST00000365510 SCAF1Q9H7N4 1312 aaKnown RBP10.29□□□□□ -0.76
RNU1-55P-201ENST00000365510 TCOF1Q13428 1488 aaKnown RBP10.29□□□□□ -0.76
RNU1-55P-201ENST00000365510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.28□□□□□ -0.76
RNU1-55P-201ENST00000365510 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
RNU1-55P-201ENST00000365510 AGLP35573 1532 aa10.28□□□□□ -0.76
RNU1-55P-201ENST00000365510 SYCP2Q9BX26 1530 aa10.28□□□□□ -0.76
RNU1-55P-201ENST00000365510 HSPA1LP34931 641 aa10.27□□□□□ -0.77
RNU1-55P-201ENST00000365510 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
RNU1-55P-201ENST00000365510 CLTCQ00610 1675 aaKnown RBP10.26□□□□□ -0.77
RNU1-55P-201ENST00000365510 PLEKHH2Q8IVE3 1493 aa10.26□□□□□ -0.77
RNU1-55P-201ENST00000365510 PTPRKQ15262 1439 aa10.25□□□□□ -0.77
RNU1-55P-201ENST00000365510 KIF3BO15066 747 aa10.25□□□□□ -0.77
RNU1-55P-201ENST00000365510 REREQ9P2R6 1566 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms