RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 ARHGEF12Q9NZN5 1544 aa15.53■□□□□ 0.08
SNORA55-201ENST00000364587 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
SNORA55-201ENST00000364587 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
SNORA55-201ENST00000364587 MED1Q15648 1581 aaPredicted RBP15.52■□□□□ 0.07
SNORA55-201ENST00000364587 HSPA1LP34931 641 aa15.5■□□□□ 0.07
SNORA55-201ENST00000364587 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
SNORA55-201ENST00000364587 ATP10AO60312 1499 aa15.48■□□□□ 0.07
SNORA55-201ENST00000364587 ZNF335Q9H4Z2 1342 aaPredicted RBP15.47■□□□□ 0.07
SNORA55-201ENST00000364587 CTTNBP2Q8WZ74 1663 aa15.47■□□□□ 0.07
SNORA55-201ENST00000364587 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
SNORA55-201ENST00000364587 HECW1Q76N89 1606 aa15.46■□□□□ 0.06
SNORA55-201ENST00000364587 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
SNORA55-201ENST00000364587 PLEKHD1A6NEE1 506 aa15.45■□□□□ 0.06
SNORA55-201ENST00000364587 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
SNORA55-201ENST00000364587 C9orf84Q5VXU9 1444 aa15.44■□□□□ 0.06
SNORA55-201ENST00000364587 PIP4K2BP78356 416 aa15.43■□□□□ 0.06
SNORA55-201ENST00000364587 SCAPERQ9BY12 1400 aa15.42■□□□□ 0.06
SNORA55-201ENST00000364587 TRAPPC8Q9Y2L5 1435 aa15.42■□□□□ 0.06
SNORA55-201ENST00000364587 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
SNORA55-201ENST00000364587 TOM1O60784 492 aa15.4■□□□□ 0.06
SNORA55-201ENST00000364587 NCKAP5LQ9HCH0 1330 aa15.4■□□□□ 0.06
SNORA55-201ENST00000364587 RAPGEF6Q8TEU7 1601 aa15.37■□□□□ 0.05
SNORA55-201ENST00000364587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNORA55-201ENST00000364587 CAMSAP1Q5T5Y3 1602 aa15.35■□□□□ 0.05
SNORA55-201ENST00000364587 C3P01024 1663 aa15.35■□□□□ 0.05
SNORA55-201ENST00000364587 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
SNORA55-201ENST00000364587 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.05
SNORA55-201ENST00000364587 PKD2Q13563 968 aa15.33■□□□□ 0.04
SNORA55-201ENST00000364587 PLCH2O75038 1416 aa15.3■□□□□ 0.04
SNORA55-201ENST00000364587 EFCAB2Q5VUJ9 269 aa15.3■□□□□ 0.04
SNORA55-201ENST00000364587 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
SNORA55-201ENST00000364587 AFAP1Q8N556 730 aa15.28■□□□□ 0.04
SNORA55-201ENST00000364587 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.04
SNORA55-201ENST00000364587 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
SNORA55-201ENST00000364587 NPATQ14207 1427 aa15.25■□□□□ 0.03
SNORA55-201ENST00000364587 PLA2R1Q13018 1463 aa15.24■□□□□ 0.03
SNORA55-201ENST00000364587 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
SNORA55-201ENST00000364587 PRXQ9BXM0 1461 aa15.24■□□□□ 0.03
SNORA55-201ENST00000364587 AGLP35573 1532 aa15.23■□□□□ 0.03
SNORA55-201ENST00000364587 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
SNORA55-201ENST00000364587 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
SNORA55-201ENST00000364587 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
SNORA55-201ENST00000364587 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
SNORA55-201ENST00000364587 PTPRKQ15262 1439 aa15.21■□□□□ 0.03
SNORA55-201ENST00000364587 ZMYM3Q14202 1370 aa15.21■□□□□ 0.02
SNORA55-201ENST00000364587 DIP2CQ9Y2E4 1556 aa15.19■□□□□ 0.02
SNORA55-201ENST00000364587 CPS1P31327 1500 aa15.19■□□□□ 0.02
SNORA55-201ENST00000364587 KDM5CP41229 1560 aa15.18■□□□□ 0.02
SNORA55-201ENST00000364587 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
SNORA55-201ENST00000364587 POTEAQ6S8J7 498 aa15.16■□□□□ 0.02
SNORA55-201ENST00000364587 MLH3Q9UHC1 1453 aa15.15■□□□□ 0.02
SNORA55-201ENST00000364587 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
SNORA55-201ENST00000364587 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
SNORA55-201ENST00000364587 ABCA6Q8N139 1617 aa15.13■□□□□ 0.01
SNORA55-201ENST00000364587 CEP170BQ9Y4F5 1589 aaPredicted RBP15.12■□□□□ 0.01
SNORA55-201ENST00000364587 MROH2AA6NES4 1674 aa15.11■□□□□ 0.01
SNORA55-201ENST00000364587 ZNF142P52746 1687 aaPredicted RBP15.11■□□□□ 0.01
SNORA55-201ENST00000364587 MYO5CQ9NQX4 1742 aa15.11■□□□□ 0.01
SNORA55-201ENST00000364587 ALKQ9UM73 1620 aa15.1■□□□□ 0.01
SNORA55-201ENST00000364587 ARHGAP5Q13017 1502 aa15.09■□□□□ 0.01
SNORA55-201ENST00000364587 MYO3AQ8NEV4 1616 aa15.09■□□□□ 0.01
SNORA55-201ENST00000364587 CDK13Q14004 1512 aaKnown RBP15.08■□□□□ 0.01
SNORA55-201ENST00000364587 CDK11AQ9UQ88 783 aaPredicted RBP15.08■□□□□ 0
SNORA55-201ENST00000364587 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
SNORA55-201ENST00000364587 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
SNORA55-201ENST00000364587 A2ML1A8K2U0 1454 aa15.03■□□□□ -0
SNORA55-201ENST00000364587 UPF1Q92900 1129 aaKnown RBP eCLIP15.02■□□□□ -0
SNORA55-201ENST00000364587 GGT6Q6P531 493 aa15.01□□□□□ -0.01
SNORA55-201ENST00000364587 DNMT1P26358 1616 aaKnown RBP15.01□□□□□ -0.01
SNORA55-201ENST00000364587 VWDEQ8N2E2 1590 aa15.01□□□□□ -0.01
SNORA55-201ENST00000364587 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
SNORA55-201ENST00000364587 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
SNORA55-201ENST00000364587 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
SNORA55-201ENST00000364587 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
SNORA55-201ENST00000364587 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
SNORA55-201ENST00000364587 KIF14Q15058 1648 aa14.98□□□□□ -0.01
SNORA55-201ENST00000364587 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
SNORA55-201ENST00000364587 LRRC7Q96NW7 1537 aa14.97□□□□□ -0.01
SNORA55-201ENST00000364587 SRCAPQ6ZRS2 3230 aa14.96□□□□□ -0.01
SNORA55-201ENST00000364587 THEMISQ8N1K5 641 aaPredicted RBP14.96□□□□□ -0.01
SNORA55-201ENST00000364587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.96□□□□□ -0.02
SNORA55-201ENST00000364587 NPHP4O75161 1426 aaPredicted RBP14.95□□□□□ -0.02
SNORA55-201ENST00000364587 TROQ12816 1431 aaPredicted RBP14.95□□□□□ -0.02
SNORA55-201ENST00000364587 CLIP1P30622 1438 aa14.94□□□□□ -0.02
SNORA55-201ENST00000364587 ABCC1P33527 1531 aa14.94□□□□□ -0.02
SNORA55-201ENST00000364587 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
SNORA55-201ENST00000364587 CDC42BPBQ9Y5S2 1711 aa14.94□□□□□ -0.02
SNORA55-201ENST00000364587 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
SNORA55-201ENST00000364587 MED14O60244 1454 aa14.92□□□□□ -0.02
SNORA55-201ENST00000364587 ITSN2Q9NZM3 1697 aa14.92□□□□□ -0.02
SNORA55-201ENST00000364587 TNRQ92752 1358 aa14.91□□□□□ -0.02
SNORA55-201ENST00000364587 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
SNORA55-201ENST00000364587 FAM135BQ49AJ0 1406 aa14.9□□□□□ -0.02
SNORA55-201ENST00000364587 ZNF777Q9ULD5 760 aaPredicted RBP14.89□□□□□ -0.03
SNORA55-201ENST00000364587 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
SNORA55-201ENST00000364587 A2MP01023 1474 aa14.89□□□□□ -0.03
SNORA55-201ENST00000364587 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
SNORA55-201ENST00000364587 STRCP1A6NGW2 1772 aa14.88□□□□□ -0.03
SNORA55-201ENST00000364587 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNORA55-201ENST00000364587 SYNMO15061 1565 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms