RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
TOP1-201ENST00000361337 FOXD1Q16676 465 aa12.6□□□□□ -0.39
TOP1-201ENST00000361337 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
TOP1-201ENST00000361337 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
TOP1-201ENST00000361337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
TOP1-201ENST00000361337 TCOF1Q13428 1488 aaKnown RBP12.58□□□□□ -0.4
TOP1-201ENST00000361337 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
TOP1-201ENST00000361337 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
TOP1-201ENST00000361337 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
TOP1-201ENST00000361337 IFT140Q96RY7 1462 aa12.57□□□□□ -0.4
TOP1-201ENST00000361337 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
TOP1-201ENST00000361337 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
TOP1-201ENST00000361337 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
TOP1-201ENST00000361337 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
TOP1-201ENST00000361337 KDM5BQ9UGL1 1544 aa12.55□□□□□ -0.4
TOP1-201ENST00000361337 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
TOP1-201ENST00000361337 ZNF644Q9H582 1327 aaPredicted RBP12.55□□□□□ -0.4
TOP1-201ENST00000361337 CHD1O14646 1710 aa12.55□□□□□ -0.4
TOP1-201ENST00000361337 DISP1Q96F81 1524 aa12.55□□□□□ -0.4
TOP1-201ENST00000361337 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
TOP1-201ENST00000361337 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
TOP1-201ENST00000361337 ABCA8O94911 1581 aa12.54□□□□□ -0.4
TOP1-201ENST00000361337 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
TOP1-201ENST00000361337 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
TOP1-201ENST00000361337 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
TOP1-201ENST00000361337 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■■□ 19.8
TOP1-201ENST00000361337 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
TOP1-201ENST00000361337 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
TOP1-201ENST00000361337 NUP160Q12769 1436 aa12.52□□□□□ -0.41
TOP1-201ENST00000361337 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
TOP1-201ENST00000361337 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
TOP1-201ENST00000361337 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
TOP1-201ENST00000361337 WASHC2AQ641Q2 1341 aa12.51□□□□□ -0.41
TOP1-201ENST00000361337 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
TOP1-201ENST00000361337 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
TOP1-201ENST00000361337 FGD6Q6ZV73 1430 aa12.5□□□□□ -0.41
TOP1-201ENST00000361337 PTPRGP23470 1445 aa12.49□□□□□ -0.41
TOP1-201ENST00000361337 SUPT6HQ7KZ85 1726 aaKnown RBP12.49□□□□□ -0.41
TOP1-201ENST00000361337 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
TOP1-201ENST00000361337 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
TOP1-201ENST00000361337 MLECQ14165 292 aa12.48□□□□□ -0.41
TOP1-201ENST00000361337 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
TOP1-201ENST00000361337 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
TOP1-201ENST00000361337 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
TOP1-201ENST00000361337 C11orf95C9JLR9 678 aaPredicted RBP12.46□□□□□ -0.41
TOP1-201ENST00000361337 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.41
TOP1-201ENST00000361337 UACAQ9BZF9 1416 aa12.46□□□□□ -0.41
TOP1-201ENST00000361337 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
TOP1-201ENST00000361337 DEKP35659 375 aaKnown RBP12.46□□□□□ -0.42
TOP1-201ENST00000361337 EHBP1L1Q8N3D4 1523 aa12.45□□□□□ -0.42
TOP1-201ENST00000361337 HFM1A2PYH4 1435 aa12.45□□□□□ -0.42
TOP1-201ENST00000361337 NAIPQ13075 1403 aa12.45□□□□□ -0.42
TOP1-201ENST00000361337 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
TOP1-201ENST00000361337 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
TOP1-201ENST00000361337 DNMT1P26358 1616 aaKnown RBP12.43□□□□□ -0.42
TOP1-201ENST00000361337 PTPN23Q9H3S7 1636 aa12.43□□□□□ -0.42
TOP1-201ENST00000361337 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
TOP1-201ENST00000361337 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
TOP1-201ENST00000361337 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
TOP1-201ENST00000361337 MAST1Q9Y2H9 1570 aa12.42□□□□□ -0.42
TOP1-201ENST00000361337 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
TOP1-201ENST00000361337 GGT6Q6P531 493 aa12.4□□□□□ -0.42
TOP1-201ENST00000361337 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
TOP1-201ENST00000361337 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
TOP1-201ENST00000361337 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
TOP1-201ENST00000361337 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
TOP1-201ENST00000361337 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
TOP1-201ENST00000361337 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
TOP1-201ENST00000361337 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
TOP1-201ENST00000361337 PRKRIP1Q9H875 184 aaPredicted RBP12.37□□□□□ -0.43
TOP1-201ENST00000361337 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
TOP1-201ENST00000361337 EIF4G2P78344 907 aaKnown RBP eCLIP12.37□□□□□ -0.43
TOP1-201ENST00000361337 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
TOP1-201ENST00000361337 ESF1Q9H501 851 aaKnown RBP12.36□□□□□ -0.43
TOP1-201ENST00000361337 MYOM3Q5VTT5 1437 aa12.36□□□□□ -0.43
TOP1-201ENST00000361337 DAXXQ9UER7 740 aaPredicted RBP12.36□□□□□ -0.43
TOP1-201ENST00000361337 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
TOP1-201ENST00000361337 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
TOP1-201ENST00000361337 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
TOP1-201ENST00000361337 KDM6BO15054 1643 aa12.35□□□□□ -0.43
TOP1-201ENST00000361337 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
TOP1-201ENST00000361337 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
TOP1-201ENST00000361337 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
TOP1-201ENST00000361337 SYNJ2O15056 1496 aa12.33□□□□□ -0.43
TOP1-201ENST00000361337 DEPDC5O75140 1603 aa12.33□□□□□ -0.44
TOP1-201ENST00000361337 PLB1Q6P1J6 1458 aa12.33□□□□□ -0.44
TOP1-201ENST00000361337 ARXQ96QS3 562 aa12.33□□□□□ -0.44
TOP1-201ENST00000361337 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
TOP1-201ENST00000361337 PKD2Q13563 968 aa12.32□□□□□ -0.44
TOP1-201ENST00000361337 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
TOP1-201ENST00000361337 ARHGEF5Q12774 1597 aa12.32□□□□□ -0.44
TOP1-201ENST00000361337 MPHOSPH9Q99550 1183 aa12.32□□□□□ -0.44
TOP1-201ENST00000361337 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
TOP1-201ENST00000361337 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
TOP1-201ENST00000361337 CDK13Q14004 1512 aaKnown RBP12.31□□□□□ -0.44
TOP1-201ENST00000361337 NCOA1Q15788 1441 aa12.3□□□□□ -0.44
TOP1-201ENST00000361337 KIF3BO15066 747 aa12.3□□□□□ -0.44
TOP1-201ENST00000361337 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
TOP1-201ENST00000361337 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
TOP1-201ENST00000361337 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms