RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.3
CCDC144A-203ENST00000360495 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.29
CCDC144A-203ENST00000360495 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
CCDC144A-203ENST00000360495 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
CCDC144A-203ENST00000360495 HTATSF1O43719 755 aaKnown RBP16.86■□□□□ 0.29
CCDC144A-203ENST00000360495 TMF1P82094 1093 aa16.86■□□□□ 0.29
CCDC144A-203ENST00000360495 APBB1O00213 710 aa16.86■□□□□ 0.29
CCDC144A-203ENST00000360495 DDX11L8A8MPP1 907 aa16.86■□□□□ 0.29
CCDC144A-203ENST00000360495 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
CCDC144A-203ENST00000360495 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
CCDC144A-203ENST00000360495 TPM4P67936 248 aa16.85■□□□□ 0.29
CCDC144A-203ENST00000360495 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
CCDC144A-203ENST00000360495 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
CCDC144A-203ENST00000360495 ZNF771Q7L3S4 317 aaPredicted RBP16.84■□□□□ 0.29
CCDC144A-203ENST00000360495 FANCIQ9NVI1 1328 aa16.84■□□□□ 0.29
CCDC144A-203ENST00000360495 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
CCDC144A-203ENST00000360495 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
CCDC144A-203ENST00000360495 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
CCDC144A-203ENST00000360495 ITPRIPQ8IWB1 547 aa16.81■□□□□ 0.28
CCDC144A-203ENST00000360495 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
CCDC144A-203ENST00000360495 PHF14O94880 888 aa16.81■□□□□ 0.28
CCDC144A-203ENST00000360495 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
CCDC144A-203ENST00000360495 CCNB3Q8WWL7 1395 aa16.8■□□□□ 0.28
CCDC144A-203ENST00000360495 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
CCDC144A-203ENST00000360495 CSPP1Q1MSJ5 1256 aa16.79■□□□□ 0.28
CCDC144A-203ENST00000360495 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
CCDC144A-203ENST00000360495 PDE4AP27815 886 aa16.78■□□□□ 0.28
CCDC144A-203ENST00000360495 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.28
CCDC144A-203ENST00000360495 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
CCDC144A-203ENST00000360495 MORC1Q86VD1 984 aa16.77■□□□□ 0.27
CCDC144A-203ENST00000360495 PLEKHD1A6NEE1 506 aa16.76■□□□□ 0.27
CCDC144A-203ENST00000360495 POGKQ9P215 609 aa16.76■□□□□ 0.27
CCDC144A-203ENST00000360495 HAP1P54257 671 aaPredicted RBP16.75■□□□□ 0.27
CCDC144A-203ENST00000360495 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
CCDC144A-203ENST00000360495 CLSTN1O94985 981 aa16.75■□□□□ 0.27
CCDC144A-203ENST00000360495 GOLGA2Q08379 1002 aa16.74■□□□□ 0.27
CCDC144A-203ENST00000360495 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
CCDC144A-203ENST00000360495 RALBP1Q15311 655 aa16.74■□□□□ 0.27
CCDC144A-203ENST00000360495 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
CCDC144A-203ENST00000360495 PKNOX2Q96KN3 472 aa16.72■□□□□ 0.27
CCDC144A-203ENST00000360495 FAM161AQ3B820 660 aa16.72■□□□□ 0.27
CCDC144A-203ENST00000360495 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
CCDC144A-203ENST00000360495 HSP90B1P14625 803 aaKnown RBP16.72■□□□□ 0.27
CCDC144A-203ENST00000360495 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
CCDC144A-203ENST00000360495 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
CCDC144A-203ENST00000360495 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
CCDC144A-203ENST00000360495 ST18O60284 1047 aa16.7■□□□□ 0.26
CCDC144A-203ENST00000360495 TPM3P06753 285 aa16.7■□□□□ 0.26
CCDC144A-203ENST00000360495 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
CCDC144A-203ENST00000360495 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.69■□□□□ 0.26
CCDC144A-203ENST00000360495 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
CCDC144A-203ENST00000360495 GPS2Q13227 327 aa16.68■□□□□ 0.26
CCDC144A-203ENST00000360495 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
CCDC144A-203ENST00000360495 NACADO15069 1562 aa16.67■□□□□ 0.26
CCDC144A-203ENST00000360495 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
CCDC144A-203ENST00000360495 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
CCDC144A-203ENST00000360495 CALRP27797 417 aaKnown RBP16.65■□□□□ 0.26
CCDC144A-203ENST00000360495 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
CCDC144A-203ENST00000360495 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
CCDC144A-203ENST00000360495 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC144A-203ENST00000360495 TEX35Q5T0J7 233 aa16.64■□□□□ 0.25
CCDC144A-203ENST00000360495 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
CCDC144A-203ENST00000360495 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
CCDC144A-203ENST00000360495 CREBRFQ8IUR6 639 aa16.62■□□□□ 0.25
CCDC144A-203ENST00000360495 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
CCDC144A-203ENST00000360495 GOLGA6L19H0YKK7 550 aa16.62■□□□□ 0.25
CCDC144A-203ENST00000360495 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
CCDC144A-203ENST00000360495 NPHP1O15259 732 aa16.61■□□□□ 0.25
CCDC144A-203ENST00000360495 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
CCDC144A-203ENST00000360495 HMMRO75330 724 aa16.6■□□□□ 0.25
CCDC144A-203ENST00000360495 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-203ENST00000360495 PDE4CQ08493 712 aa16.6■□□□□ 0.25
CCDC144A-203ENST00000360495 LMOD2Q6P5Q4 547 aa16.6■□□□□ 0.25
CCDC144A-203ENST00000360495 ISY1Q9ULR0 285 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-203ENST00000360495 BECN2A8MW95 431 aa16.59■□□□□ 0.25
CCDC144A-203ENST00000360495 MAP7D2Q96T17 732 aa16.58■□□□□ 0.24
CCDC144A-203ENST00000360495 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
CCDC144A-203ENST00000360495 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
CCDC144A-203ENST00000360495 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.24
CCDC144A-203ENST00000360495 SOX12O15370 315 aa16.58■□□□□ 0.24
CCDC144A-203ENST00000360495 SF3A1Q15459 793 aaKnown RBP16.58■□□□□ 0.24
CCDC144A-203ENST00000360495 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
CCDC144A-203ENST00000360495 RRP1P56182 461 aaKnown RBP16.57■□□□□ 0.24
CCDC144A-203ENST00000360495 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
CCDC144A-203ENST00000360495 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
CCDC144A-203ENST00000360495 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
CCDC144A-203ENST00000360495 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
CCDC144A-203ENST00000360495 NFKBIBQ15653 356 aa16.56■□□□□ 0.24
CCDC144A-203ENST00000360495 MTERF4Q7Z6M4 381 aaKnown RBP16.56■□□□□ 0.24
CCDC144A-203ENST00000360495 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
CCDC144A-203ENST00000360495 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
CCDC144A-203ENST00000360495 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
CCDC144A-203ENST00000360495 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms