RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 C11orf95C9JLR9 678 aaPredicted RBP6.47□□□□□ -1.37
PTPN22-201ENST00000359785 CNTLNQ9NXG0 1405 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 ZMYM3Q14202 1370 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 SMG6Q86US8 1419 aaKnown RBP6.47□□□□□ -1.37
PTPN22-201ENST00000359785 ABCC2Q92887 1545 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 EIF4G3O43432 1585 aaKnown RBP6.47□□□□□ -1.37
PTPN22-201ENST00000359785 FMN1Q68DA7 1419 aa6.46□□□□□ -1.37
PTPN22-201ENST00000359785 MYO3AQ8NEV4 1616 aa6.46□□□□□ -1.38
PTPN22-201ENST00000359785 USP32Q8NFA0 1604 aa6.46□□□□□ -1.38
PTPN22-201ENST00000359785 CEP152O94986 1710 aa6.46□□□□□ -1.38
PTPN22-201ENST00000359785 BCORL1Q5H9F3 1711 aa6.46□□□□□ -1.38
PTPN22-201ENST00000359785 RPRD2Q5VT52 1461 aaKnown RBP6.46□□□□□ -1.38
PTPN22-201ENST00000359785 EIF2AK4Q9P2K8 1649 aaKnown RBP6.45□□□□□ -1.38
PTPN22-201ENST00000359785 NAIPQ13075 1403 aa6.45□□□□□ -1.38
PTPN22-201ENST00000359785 MYO5CQ9NQX4 1742 aa6.45□□□□□ -1.38
PTPN22-201ENST00000359785 IQGAP1P46940 1657 aa6.45□□□□□ -1.38
PTPN22-201ENST00000359785 IFT140Q96RY7 1462 aa6.44□□□□□ -1.38
PTPN22-201ENST00000359785 MAGI2Q86UL8 1455 aa6.44□□□□□ -1.38
PTPN22-201ENST00000359785 MYOM3Q5VTT5 1437 aa6.43□□□□□ -1.38
PTPN22-201ENST00000359785 WASHC2AQ641Q2 1341 aa6.43□□□□□ -1.38
PTPN22-201ENST00000359785 FHOD3Q2V2M9 1422 aa6.43□□□□□ -1.38
PTPN22-201ENST00000359785 IFT172Q9UG01 1749 aa6.43□□□□□ -1.38
PTPN22-201ENST00000359785 URB2Q14146 1524 aaKnown RBP6.43□□□□□ -1.38
PTPN22-201ENST00000359785 MAGI3Q5TCQ9 1506 aa6.43□□□□□ -1.38
PTPN22-201ENST00000359785 IGF1RP08069 1367 aa6.43□□□□□ -1.38
PTPN22-201ENST00000359785 FAM9AQ8IZU1 332 aaPredicted RBP6.43□□□□□ -1.38
PTPN22-201ENST00000359785 PTPRGP23470 1445 aa6.42□□□□□ -1.38
PTPN22-201ENST00000359785 RALGAPBQ86X10 1494 aa6.42□□□□□ -1.38
PTPN22-201ENST00000359785 PHLDB1Q86UU1 1377 aa6.41□□□□□ -1.38
PTPN22-201ENST00000359785 ZC3H13Q5T200 1668 aaKnown RBP6.41□□□□□ -1.38
PTPN22-201ENST00000359785 KDM6BO15054 1643 aa6.41□□□□□ -1.38
PTPN22-201ENST00000359785 IQGAP3Q86VI3 1631 aa6.41□□□□□ -1.38
PTPN22-201ENST00000359785 CAMSAP2Q08AD1 1489 aa6.41□□□□□ -1.38
PTPN22-201ENST00000359785 PRDM15P57071 1507 aaPredicted RBP6.4□□□□□ -1.38
PTPN22-201ENST00000359785 WASHC2CQ9Y4E1 1318 aa6.4□□□□□ -1.38
PTPN22-201ENST00000359785 ATP10AO60312 1499 aa6.4□□□□□ -1.38
PTPN22-201ENST00000359785 DEPDC5O75140 1603 aa6.4□□□□□ -1.38
PTPN22-201ENST00000359785 LRPPRCP42704 1394 aaKnown RBP6.4□□□□□ -1.38
PTPN22-201ENST00000359785 ZNF608Q9ULD9 1512 aaPredicted RBP6.4□□□□□ -1.38
PTPN22-201ENST00000359785 SYNMO15061 1565 aa6.4□□□□□ -1.38
PTPN22-201ENST00000359785 INO80Q9ULG1 1556 aaPredicted RBP6.4□□□□□ -1.39
PTPN22-201ENST00000359785 POLA1P09884 1462 aaPredicted RBP6.4□□□□□ -1.39
PTPN22-201ENST00000359785 MYOM1P52179 1685 aa6.4□□□□□ -1.39
PTPN22-201ENST00000359785 KIAA0556O60303 1618 aa6.39□□□□□ -1.39
PTPN22-201ENST00000359785 SPHKAPQ2M3C7 1700 aa6.39□□□□□ -1.39
PTPN22-201ENST00000359785 ABCA6Q8N139 1617 aa6.38□□□□□ -1.39
PTPN22-201ENST00000359785 MAGI1Q96QZ7 1491 aaPredicted RBP6.38□□□□□ -1.39
PTPN22-201ENST00000359785 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
PTPN22-201ENST00000359785 USP35Q9P2H5 1018 aa6.37□□□□□ -1.39
PTPN22-201ENST00000359785 SYNJ2O15056 1496 aa6.37□□□□□ -1.39
PTPN22-201ENST00000359785 REREQ9P2R6 1566 aa6.37□□□□□ -1.39
PTPN22-201ENST00000359785 RAPGEF6Q8TEU7 1601 aa6.37□□□□□ -1.39
PTPN22-201ENST00000359785 RBM19Q9Y4C8 960 aaKnown RBP6.37□□□□□ -1.39
PTPN22-201ENST00000359785 BLMP54132 1417 aaPredicted RBP6.37□□□□□ -1.39
PTPN22-201ENST00000359785 ARHGAP31Q2M1Z3 1444 aa6.36□□□□□ -1.39
PTPN22-201ENST00000359785 ROCK2O75116 1388 aaKnown RBP6.36□□□□□ -1.39
PTPN22-201ENST00000359785 PREX2Q70Z35 1606 aa6.36□□□□□ -1.39
PTPN22-201ENST00000359785 EPRSP07814 1512 aaKnown RBP6.36□□□□□ -1.39
PTPN22-201ENST00000359785 PTPRKQ15262 1439 aa6.35□□□□□ -1.39
PTPN22-201ENST00000359785 DHX29Q7Z478 1369 aaKnown RBP6.35□□□□□ -1.39
PTPN22-201ENST00000359785 DUOX2Q9NRD8 1548 aa6.34□□□□□ -1.39
PTPN22-201ENST00000359785 UHRF1BP1LA0JNW5 1464 aa6.34□□□□□ -1.39
PTPN22-201ENST00000359785 PZPP20742 1482 aa6.34□□□□□ -1.39
PTPN22-201ENST00000359785 PLA2R1Q13018 1463 aa6.34□□□□□ -1.39
PTPN22-201ENST00000359785 NUP160Q12769 1436 aa6.34□□□□□ -1.4
PTPN22-201ENST00000359785 CCDC141Q6ZP82 1450 aa6.33□□□□□ -1.4
PTPN22-201ENST00000359785 CDK13Q14004 1512 aaKnown RBP6.33□□□□□ -1.4
PTPN22-201ENST00000359785 ANKRD26Q9UPS8 1709 aa6.33□□□□□ -1.4
PTPN22-201ENST00000359785 ARAP3Q8WWN8 1544 aa6.33□□□□□ -1.4
PTPN22-201ENST00000359785 N4BP2Q86UW6 1770 aaPredicted RBP6.32□□□□□ -1.4
PTPN22-201ENST00000359785 ABCA8O94911 1581 aa6.32□□□□□ -1.4
PTPN22-201ENST00000359785 GPRASP1Q5JY77 1395 aa6.32□□□□□ -1.4
PTPN22-201ENST00000359785 VWDEQ8N2E2 1590 aa6.31□□□□□ -1.4
PTPN22-201ENST00000359785 CLTCL1P53675 1640 aa6.3□□□□□ -1.4
PTPN22-201ENST00000359785 ANKRD30BQ9BXX2 1392 aa6.3□□□□□ -1.4
PTPN22-201ENST00000359785 WDR7Q9Y4E6 1490 aa6.3□□□□□ -1.4
PTPN22-201ENST00000359785 CARMIL1Q5VZK9 1371 aa6.3□□□□□ -1.4
PTPN22-201ENST00000359785 PRKCSHP14314 528 aaPredicted RBP6.3□□□□□ -1.4
PTPN22-201ENST00000359785 PPP4R2Q9NY27 417 aa6.3□□□□□ -1.4
PTPN22-201ENST00000359785 UBE2Q2Q8WVN8 375 aa6.29□□□□□ -1.4
PTPN22-201ENST00000359785 MADDQ8WXG6 1647 aa6.29□□□□□ -1.4
PTPN22-201ENST00000359785 SHPRHQ149N8 1683 aa6.29□□□□□ -1.4
PTPN22-201ENST00000359785 CCDC7Q96M83 1385 aa6.29□□□□□ -1.4
PTPN22-201ENST00000359785 MS4A1P11836 297 aa6.28□□□□□ -1.4
PTPN22-201ENST00000359785 KANK4Q5T7N3 995 aaPredicted RBP6.28□□□□□ -1.4
PTPN22-201ENST00000359785 DAPK1P53355 1430 aa6.28□□□□□ -1.4
PTPN22-201ENST00000359785 CDC42BPBQ9Y5S2 1711 aa6.27□□□□□ -1.41
PTPN22-201ENST00000359785 NEFLP07196 543 aa6.27□□□□□ -1.41
PTPN22-201ENST00000359785 TUBGCP6Q96RT7 1819 aa6.27□□□□□ -1.41
PTPN22-201ENST00000359785 ADGRB2O60241 1585 aa6.26□□□□□ -1.41
PTPN22-201ENST00000359785 NCBP3Q53F19 620 aaKnown RBP6.26□□□□□ -1.41
PTPN22-201ENST00000359785 COL17A1Q9UMD9 1497 aaPredicted RBP6.26□□□□□ -1.41
PTPN22-201ENST00000359785 NLRP1Q9C000 1473 aa6.26□□□□□ -1.41
PTPN22-201ENST00000359785 MROH1Q8NDA8 1641 aa6.26□□□□□ -1.41
PTPN22-201ENST00000359785 ERCC6Q03468 1493 aa6.26□□□□□ -1.41
PTPN22-201ENST00000359785 SETBP1Q9Y6X0 1596 aa6.25□□□□□ -1.41
PTPN22-201ENST00000359785 NPC1L1Q9UHC9 1359 aa6.25□□□□□ -1.41
PTPN22-201ENST00000359785 TTC37Q6PGP7 1564 aa6.25□□□□□ -1.41
PTPN22-201ENST00000359785 DISP1Q96F81 1524 aa6.25□□□□□ -1.41
PTPN22-201ENST00000359785 CLTCQ00610 1675 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms