RNA–Protein interactions for RNA: ENST00000359632.7

HPS1-203, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-203ENST00000359632 EEA1Q15075 1411 aa21.8■■□□□ 1.08
HPS1-203ENST00000359632 RAPGEF6Q8TEU7 1601 aa21.79■■□□□ 1.08
HPS1-203ENST00000359632 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
HPS1-203ENST00000359632 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
HPS1-203ENST00000359632 ARHGEF12Q9NZN5 1544 aa21.76■■□□□ 1.07
HPS1-203ENST00000359632 UHRF1BP1Q6BDS2 1440 aa21.76■■□□□ 1.07
HPS1-203ENST00000359632 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
HPS1-203ENST00000359632 HECW1Q76N89 1606 aa21.74■■□□□ 1.07
HPS1-203ENST00000359632 SAMD9Q5K651 1589 aa21.73■■□□□ 1.07
HPS1-203ENST00000359632 PTPRTO14522 1441 aa21.72■■□□□ 1.07
HPS1-203ENST00000359632 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
HPS1-203ENST00000359632 LTBP4Q8N2S1 1624 aa21.71■■□□□ 1.07
HPS1-203ENST00000359632 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
HPS1-203ENST00000359632 IQSEC2Q5JU85 1478 aa21.69■■□□□ 1.06
HPS1-203ENST00000359632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.06
HPS1-203ENST00000359632 ATP10AO60312 1499 aa21.67■■□□□ 1.06
HPS1-203ENST00000359632 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
HPS1-203ENST00000359632 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
HPS1-203ENST00000359632 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
HPS1-203ENST00000359632 UBAP1LF5GYI3 381 aa21.59■■□□□ 1.05
HPS1-203ENST00000359632 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
HPS1-203ENST00000359632 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
HPS1-203ENST00000359632 PLCH2O75038 1416 aa21.53■■□□□ 1.04
HPS1-203ENST00000359632 C3P01024 1663 aa21.53■■□□□ 1.04
HPS1-203ENST00000359632 ZNF335Q9H4Z2 1342 aaPredicted RBP21.51■■□□□ 1.03
HPS1-203ENST00000359632 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
HPS1-203ENST00000359632 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
HPS1-203ENST00000359632 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
HPS1-203ENST00000359632 ESF1Q9H501 851 aaKnown RBP21.48■■□□□ 1.03
HPS1-203ENST00000359632 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
HPS1-203ENST00000359632 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
HPS1-203ENST00000359632 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.02
HPS1-203ENST00000359632 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
HPS1-203ENST00000359632 AFAP1Q8N556 730 aa21.44■■□□□ 1.02
HPS1-203ENST00000359632 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
HPS1-203ENST00000359632 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
HPS1-203ENST00000359632 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
HPS1-203ENST00000359632 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
HPS1-203ENST00000359632 KDM5CP41229 1560 aa21.41■■□□□ 1.02
HPS1-203ENST00000359632 HSPA1LP34931 641 aa21.41■■□□□ 1.02
HPS1-203ENST00000359632 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
HPS1-203ENST00000359632 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
HPS1-203ENST00000359632 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
HPS1-203ENST00000359632 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
HPS1-203ENST00000359632 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
HPS1-203ENST00000359632 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
HPS1-203ENST00000359632 AGLP35573 1532 aa21.35■■□□□ 1.01
HPS1-203ENST00000359632 CNTLNQ9NXG0 1405 aa21.35■■□□□ 1.01
HPS1-203ENST00000359632 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
HPS1-203ENST00000359632 LRRIQ1Q96JM4 1722 aa21.33■■□□□ 1.01
HPS1-203ENST00000359632 NPATQ14207 1427 aa21.31■■□□□ 1
HPS1-203ENST00000359632 MLH3Q9UHC1 1453 aa21.31■■□□□ 1
HPS1-203ENST00000359632 FMN1Q68DA7 1419 aa21.3■■□□□ 1
HPS1-203ENST00000359632 PKD2Q13563 968 aa21.3■■□□□ 1
HPS1-203ENST00000359632 KIF14Q15058 1648 aa21.29■■□□□ 1
HPS1-203ENST00000359632 PLA2R1Q13018 1463 aa21.28■■□□□ 1
HPS1-203ENST00000359632 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
HPS1-203ENST00000359632 TOM1O60784 492 aa21.27■■□□□ 1
HPS1-203ENST00000359632 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
HPS1-203ENST00000359632 ZMYM3Q14202 1370 aa21.24■□□□□ 0.99
HPS1-203ENST00000359632 MROH2AA6NES4 1674 aa21.24■□□□□ 0.99
HPS1-203ENST00000359632 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
HPS1-203ENST00000359632 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
HPS1-203ENST00000359632 ZNF142P52746 1687 aaPredicted RBP21.23■□□□□ 0.99
HPS1-203ENST00000359632 SUPT6HQ7KZ85 1726 aaKnown RBP21.23■□□□□ 0.99
HPS1-203ENST00000359632 CEP170BQ9Y4F5 1589 aaPredicted RBP21.22■□□□□ 0.99
HPS1-203ENST00000359632 TROQ12816 1431 aaPredicted RBP21.19■□□□□ 0.98
HPS1-203ENST00000359632 ABCC1P33527 1531 aa21.19■□□□□ 0.98
HPS1-203ENST00000359632 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
HPS1-203ENST00000359632 CLIP1P30622 1438 aa21.17■□□□□ 0.98
HPS1-203ENST00000359632 CPS1P31327 1500 aa21.17■□□□□ 0.98
HPS1-203ENST00000359632 CDC42BPBQ9Y5S2 1711 aa21.16■□□□□ 0.98
HPS1-203ENST00000359632 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
HPS1-203ENST00000359632 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
HPS1-203ENST00000359632 PTPRKQ15262 1439 aa21.14■□□□□ 0.98
HPS1-203ENST00000359632 CASKIN1Q8WXD9 1431 aa21.14■□□□□ 0.98
HPS1-203ENST00000359632 CLTCQ00610 1675 aaKnown RBP21.14■□□□□ 0.97
HPS1-203ENST00000359632 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
HPS1-203ENST00000359632 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
HPS1-203ENST00000359632 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
HPS1-203ENST00000359632 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
HPS1-203ENST00000359632 A2ML1A8K2U0 1454 aa21.07■□□□□ 0.96
HPS1-203ENST00000359632 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
HPS1-203ENST00000359632 RGS17Q9UGC6 210 aaPredicted RBP21.06■□□□□ 0.96
HPS1-203ENST00000359632 DNMT1P26358 1616 aaKnown RBP21.06■□□□□ 0.96
HPS1-203ENST00000359632 NEURL4Q96JN8 1562 aa21.06■□□□□ 0.96
HPS1-203ENST00000359632 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
HPS1-203ENST00000359632 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
HPS1-203ENST00000359632 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
HPS1-203ENST00000359632 GGT6Q6P531 493 aa21.04■□□□□ 0.96
HPS1-203ENST00000359632 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
HPS1-203ENST00000359632 ZNF777Q9ULD5 760 aaPredicted RBP21.01■□□□□ 0.95
HPS1-203ENST00000359632 CDC42BPAQ5VT25 1732 aa21.01■□□□□ 0.95
HPS1-203ENST00000359632 VWDEQ8N2E2 1590 aa21■□□□□ 0.95
HPS1-203ENST00000359632 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
HPS1-203ENST00000359632 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
HPS1-203ENST00000359632 A2MP01023 1474 aa20.99■□□□□ 0.95
HPS1-203ENST00000359632 SYCP2Q9BX26 1530 aa20.99■□□□□ 0.95
HPS1-203ENST00000359632 ATP7AQ04656 1500 aa20.98■□□□□ 0.95
HPS1-203ENST00000359632 HNRNPMP52272 730 aaKnown RBP eCLIP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms