RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 PRG4Q92954 1404 aaPredicted RBP11.5□□□□□ -0.57
ATG13-201ENST00000359513 DHX57Q6P158 1386 aaKnown RBP11.5□□□□□ -0.57
ATG13-201ENST00000359513 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
ATG13-201ENST00000359513 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
ATG13-201ENST00000359513 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
ATG13-201ENST00000359513 LAMC3Q9Y6N6 1575 aa11.48□□□□□ -0.57
ATG13-201ENST00000359513 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
ATG13-201ENST00000359513 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
ATG13-201ENST00000359513 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
ATG13-201ENST00000359513 TMF1P82094 1093 aa11.46□□□□□ -0.57
ATG13-201ENST00000359513 FKBP8Q14318 412 aa11.46□□□□□ -0.57
ATG13-201ENST00000359513 ARAP1Q96P48 1450 aa11.46□□□□□ -0.57
ATG13-201ENST00000359513 NUTM2DQ5VT03 806 aaPredicted RBP11.46□□□□□ -0.58
ATG13-201ENST00000359513 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.58
ATG13-201ENST00000359513 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
ATG13-201ENST00000359513 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
ATG13-201ENST00000359513 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
ATG13-201ENST00000359513 A0A0G2JS52 829 aa11.44□□□□□ -0.58
ATG13-201ENST00000359513 CC2D1BQ5T0F9 858 aaKnown RBP11.44□□□□□ -0.58
ATG13-201ENST00000359513 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
ATG13-201ENST00000359513 ERICH3Q5RHP9 1530 aa11.43□□□□□ -0.58
ATG13-201ENST00000359513 PHLDB1Q86UU1 1377 aa11.43□□□□□ -0.58
ATG13-201ENST00000359513 AFAP1Q8N556 730 aa11.43□□□□□ -0.58
ATG13-201ENST00000359513 CASKIN1Q8WXD9 1431 aa11.42□□□□□ -0.58
ATG13-201ENST00000359513 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
ATG13-201ENST00000359513 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
ATG13-201ENST00000359513 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
ATG13-201ENST00000359513 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
ATG13-201ENST00000359513 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
ATG13-201ENST00000359513 SOX12O15370 315 aa11.39□□□□□ -0.59
ATG13-201ENST00000359513 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
ATG13-201ENST00000359513 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
ATG13-201ENST00000359513 ROCK2O75116 1388 aaKnown RBP11.38□□□□□ -0.59
ATG13-201ENST00000359513 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
ATG13-201ENST00000359513 SYNJ2O15056 1496 aa11.37□□□□□ -0.59
ATG13-201ENST00000359513 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
ATG13-201ENST00000359513 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
ATG13-201ENST00000359513 IRX6P78412 446 aaPredicted RBP11.36□□□□□ -0.59
ATG13-201ENST00000359513 EID1Q9Y6B2 187 aa11.36□□□□□ -0.59
ATG13-201ENST00000359513 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
ATG13-201ENST00000359513 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
ATG13-201ENST00000359513 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
ATG13-201ENST00000359513 KIF15Q9NS87 1388 aa11.36□□□□□ -0.59
ATG13-201ENST00000359513 RRBP1Q9P2E9 1410 aaKnown RBP11.36□□□□□ -0.59
ATG13-201ENST00000359513 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
ATG13-201ENST00000359513 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
ATG13-201ENST00000359513 CCDC144AA2RUR9 1427 aa11.34□□□□□ -0.59
ATG13-201ENST00000359513 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
ATG13-201ENST00000359513 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
ATG13-201ENST00000359513 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
ATG13-201ENST00000359513 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
ATG13-201ENST00000359513 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
ATG13-201ENST00000359513 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
ATG13-201ENST00000359513 MSH5O43196 834 aa11.31□□□□□ -0.6
ATG13-201ENST00000359513 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
ATG13-201ENST00000359513 ST20-MTHFSA0A0A6YYL1 179 aa11.3□□□□□ -0.6
ATG13-201ENST00000359513 HDGFL2Q7Z4V5 671 aaPredicted RBP11.3□□□□□ -0.6
ATG13-201ENST00000359513 ANKRD50Q9ULJ7 1429 aa11.3□□□□□ -0.6
ATG13-201ENST00000359513 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
ATG13-201ENST00000359513 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
ATG13-201ENST00000359513 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
ATG13-201ENST00000359513 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
ATG13-201ENST00000359513 LAS1LQ9Y4W2 734 aaKnown RBP11.3□□□□□ -0.6
ATG13-201ENST00000359513 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
ATG13-201ENST00000359513 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
ATG13-201ENST00000359513 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
ATG13-201ENST00000359513 ARHGAP5Q13017 1502 aa11.28□□□□□ -0.6
ATG13-201ENST00000359513 MAGI1Q96QZ7 1491 aaPredicted RBP11.28□□□□□ -0.6
ATG13-201ENST00000359513 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.61
ATG13-201ENST00000359513 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
ATG13-201ENST00000359513 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
ATG13-201ENST00000359513 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
ATG13-201ENST00000359513 ARXQ96QS3 562 aa11.25□□□□□ -0.61
ATG13-201ENST00000359513 EIF3AQ14152 1382 aaKnown RBP11.24□□□□□ -0.61
ATG13-201ENST00000359513 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
ATG13-201ENST00000359513 TERF2IPQ9NYB0 399 aa11.23□□□□□ -0.61
ATG13-201ENST00000359513 CDK13Q14004 1512 aaKnown RBP11.23□□□□□ -0.61
ATG13-201ENST00000359513 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
ATG13-201ENST00000359513 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
ATG13-201ENST00000359513 EPRSP07814 1512 aaKnown RBP11.22□□□□□ -0.61
ATG13-201ENST00000359513 CCER2I3L3R5 266 aa11.22□□□□□ -0.61
ATG13-201ENST00000359513 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
ATG13-201ENST00000359513 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
ATG13-201ENST00000359513 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.62
ATG13-201ENST00000359513 MIA2Q96PC5 1412 aa11.21□□□□□ -0.62
ATG13-201ENST00000359513 WDR97A6NE52 1622 aa11.21□□□□□ -0.62
ATG13-201ENST00000359513 PNNQ9H307 717 aaKnown RBP11.2□□□□□ -0.62
ATG13-201ENST00000359513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATG13-201ENST00000359513 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
ATG13-201ENST00000359513 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
ATG13-201ENST00000359513 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
ATG13-201ENST00000359513 RALBP1Q15311 655 aa11.19□□□□□ -0.62
ATG13-201ENST00000359513 PANK3Q9H999 370 aa11.19□□□□□ -0.62
ATG13-201ENST00000359513 CUL7Q14999 1698 aa11.19□□□□□ -0.62
ATG13-201ENST00000359513 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
ATG13-201ENST00000359513 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
ATG13-201ENST00000359513 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
ATG13-201ENST00000359513 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
ATG13-201ENST00000359513 TMEM132EQ6IEE7 984 aa11.18□□□□□ -0.62
ATG13-201ENST00000359513 USP47Q96K76 1375 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms