RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
TMEM170A-201ENST00000357613 FTSJ3Q8IY81 847 aaKnown RBP16.03■□□□□ 0.16
TMEM170A-201ENST00000357613 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
TMEM170A-201ENST00000357613 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
TMEM170A-201ENST00000357613 SRPK2P78362 688 aaKnown RBP16.01■□□□□ 0.15
TMEM170A-201ENST00000357613 GRIN2BQ13224 1484 aa16■□□□□ 0.15
TMEM170A-201ENST00000357613 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
TMEM170A-201ENST00000357613 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
TMEM170A-201ENST00000357613 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
TMEM170A-201ENST00000357613 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
TMEM170A-201ENST00000357613 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
TMEM170A-201ENST00000357613 TMF1P82094 1093 aa15.96■□□□□ 0.15
TMEM170A-201ENST00000357613 TAOK2Q9UL54 1235 aa15.96■□□□□ 0.15
TMEM170A-201ENST00000357613 CARMIL2Q6F5E8 1435 aa15.96■□□□□ 0.15
TMEM170A-201ENST00000357613 NUTM2DQ5VT03 806 aaPredicted RBP15.95■□□□□ 0.14
TMEM170A-201ENST00000357613 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
TMEM170A-201ENST00000357613 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
TMEM170A-201ENST00000357613 MPHOSPH9Q99550 1183 aa15.92■□□□□ 0.14
TMEM170A-201ENST00000357613 NUP155O75694 1391 aa15.91■□□□□ 0.14
TMEM170A-201ENST00000357613 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
TMEM170A-201ENST00000357613 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
TMEM170A-201ENST00000357613 KIF21AQ7Z4S6 1674 aa15.9■□□□□ 0.14
TMEM170A-201ENST00000357613 MORC1Q86VD1 984 aa15.89■□□□□ 0.14
TMEM170A-201ENST00000357613 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
TMEM170A-201ENST00000357613 KIF3BO15066 747 aa15.89■□□□□ 0.13
TMEM170A-201ENST00000357613 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
TMEM170A-201ENST00000357613 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
TMEM170A-201ENST00000357613 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
TMEM170A-201ENST00000357613 KANK1Q14678 1352 aa15.88■□□□□ 0.13
TMEM170A-201ENST00000357613 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
TMEM170A-201ENST00000357613 BECN1Q14457 450 aa15.85■□□□□ 0.13
TMEM170A-201ENST00000357613 EFCAB2Q5VUJ9 269 aa15.85■□□□□ 0.13
TMEM170A-201ENST00000357613 PPP4R2Q9NY27 417 aa15.85■□□□□ 0.13
TMEM170A-201ENST00000357613 NUTM2FA1L443 756 aa15.85■□□□□ 0.13
TMEM170A-201ENST00000357613 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
TMEM170A-201ENST00000357613 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
TMEM170A-201ENST00000357613 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.13
TMEM170A-201ENST00000357613 APBB1O00213 710 aa15.82■□□□□ 0.12
TMEM170A-201ENST00000357613 NPHP1O15259 732 aa15.81■□□□□ 0.12
TMEM170A-201ENST00000357613 OS9Q13438 667 aaPredicted RBP15.81■□□□□ 0.12
TMEM170A-201ENST00000357613 U2AF1L5P0DN76 240 aaPredicted RBP15.8■□□□□ 0.12
TMEM170A-201ENST00000357613 U2AF1Q01081 240 aaKnown RBP eCLIP15.8■□□□□ 0.12
TMEM170A-201ENST00000357613 FMN1Q68DA7 1419 aa15.8■□□□□ 0.12
TMEM170A-201ENST00000357613 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
TMEM170A-201ENST00000357613 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
TMEM170A-201ENST00000357613 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
TMEM170A-201ENST00000357613 DDRGK1Q96HY6 314 aa15.78■□□□□ 0.12
TMEM170A-201ENST00000357613 PRXQ9BXM0 1461 aa15.78■□□□□ 0.12
TMEM170A-201ENST00000357613 PTPRGP23470 1445 aa15.76■□□□□ 0.11
TMEM170A-201ENST00000357613 TULP1O00294 542 aaPredicted RBP15.76■□□□□ 0.11
TMEM170A-201ENST00000357613 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
TMEM170A-201ENST00000357613 HDGFP51858 240 aaKnown RBP15.74■□□□□ 0.11
TMEM170A-201ENST00000357613 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
TMEM170A-201ENST00000357613 WDR62O43379 1518 aa15.74■□□□□ 0.11
TMEM170A-201ENST00000357613 ANKRD30AQ9BXX3 1397 aa15.74■□□□□ 0.11
TMEM170A-201ENST00000357613 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 KIF21BO75037 1637 aa15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 CASC1Q6TDU7 716 aa15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 WASHC2CQ9Y4E1 1318 aa15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 GOLGA6L22H0YM25 854 aa15.73■□□□□ 0.11
TMEM170A-201ENST00000357613 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 TRAK1Q9UPV9 953 aa15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 KTN1Q86UP2 1357 aaKnown RBP15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 KCNJ4P48050 445 aa15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
TMEM170A-201ENST00000357613 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.11
TMEM170A-201ENST00000357613 CCER2I3L3R5 266 aa15.71■□□□□ 0.11
TMEM170A-201ENST00000357613 FGD1P98174 961 aa15.7■□□□□ 0.1
TMEM170A-201ENST00000357613 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
TMEM170A-201ENST00000357613 CLUAP1Q96AJ1 413 aa15.7■□□□□ 0.1
TMEM170A-201ENST00000357613 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
TMEM170A-201ENST00000357613 PRG4Q92954 1404 aaPredicted RBP15.69■□□□□ 0.1
TMEM170A-201ENST00000357613 TRIM44Q96DX7 344 aaPredicted RBP15.68■□□□□ 0.1
TMEM170A-201ENST00000357613 ST20-MTHFSA0A0A6YYL1 179 aa15.68■□□□□ 0.1
TMEM170A-201ENST00000357613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
TMEM170A-201ENST00000357613 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
TMEM170A-201ENST00000357613 CSB-PGBD3P0DP91 1061 aa15.68■□□□□ 0.1
TMEM170A-201ENST00000357613 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
TMEM170A-201ENST00000357613 PNNQ9H307 717 aaKnown RBP15.66■□□□□ 0.1
TMEM170A-201ENST00000357613 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
TMEM170A-201ENST00000357613 RCAN3Q9UKA8 241 aa15.66■□□□□ 0.1
TMEM170A-201ENST00000357613 HSP90AB1P08238 724 aaKnown RBP15.65■□□□□ 0.1
TMEM170A-201ENST00000357613 CUL7Q14999 1698 aa15.65■□□□□ 0.1
TMEM170A-201ENST00000357613 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
TMEM170A-201ENST00000357613 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
TMEM170A-201ENST00000357613 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
TMEM170A-201ENST00000357613 MS4A1P11836 297 aa15.63■□□□□ 0.09
TMEM170A-201ENST00000357613 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
TMEM170A-201ENST00000357613 ZRSR1Q15695 479 aaKnown RBP15.63■□□□□ 0.09
TMEM170A-201ENST00000357613 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
TMEM170A-201ENST00000357613 KIAA0586Q9BVV6 1533 aa15.62■□□□□ 0.09
TMEM170A-201ENST00000357613 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
TMEM170A-201ENST00000357613 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
TMEM170A-201ENST00000357613 ZNF644Q9H582 1327 aaPredicted RBP15.61■□□□□ 0.09
TMEM170A-201ENST00000357613 RBM19Q9Y4C8 960 aaKnown RBP15.6■□□□□ 0.09
TMEM170A-201ENST00000357613 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms