RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
CDK16-202ENST00000357227 NESP48681 1621 aa20.78■□□□□ 0.92
CDK16-202ENST00000357227 PDE4CQ08493 712 aa20.78■□□□□ 0.92
CDK16-202ENST00000357227 EIF4G2P78344 907 aaKnown RBP eCLIP20.76■□□□□ 0.914e-7■■■□□ 16.6
CDK16-202ENST00000357227 ERICH3Q5RHP9 1530 aa20.75■□□□□ 0.91
CDK16-202ENST00000357227 CLCN1P35523 988 aa20.74■□□□□ 0.91
CDK16-202ENST00000357227 L1TD1Q5T7N2 865 aaKnown RBP20.74■□□□□ 0.91
CDK16-202ENST00000357227 PHLDB1Q86UU1 1377 aa20.73■□□□□ 0.91
CDK16-202ENST00000357227 NCOA2Q15596 1464 aa20.73■□□□□ 0.91
CDK16-202ENST00000357227 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
CDK16-202ENST00000357227 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
CDK16-202ENST00000357227 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
CDK16-202ENST00000357227 IGF1RP08069 1367 aa20.69■□□□□ 0.9
CDK16-202ENST00000357227 CCDC7Q96M83 1385 aa20.69■□□□□ 0.9
CDK16-202ENST00000357227 PRDM4Q9UKN5 801 aa20.69■□□□□ 0.9
CDK16-202ENST00000357227 POLR3GLQ9BT43 218 aa20.68■□□□□ 0.9
CDK16-202ENST00000357227 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
CDK16-202ENST00000357227 XRCC6P12956 609 aaKnown RBP eCLIP20.67■□□□□ 0.9
CDK16-202ENST00000357227 PLIN1O60240 522 aa20.66■□□□□ 0.9
CDK16-202ENST00000357227 RCAN3Q9UKA8 241 aa20.65■□□□□ 0.9
CDK16-202ENST00000357227 GZF1Q9H116 711 aaPredicted RBP20.64■□□□□ 0.89
CDK16-202ENST00000357227 SLKQ9H2G2 1235 aaPredicted RBP20.64■□□□□ 0.89
CDK16-202ENST00000357227 CFTRP13569 1480 aa20.63■□□□□ 0.89
CDK16-202ENST00000357227 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
CDK16-202ENST00000357227 BCL11BQ9C0K0 894 aaPredicted RBP20.62■□□□□ 0.89
CDK16-202ENST00000357227 PDCL3Q9H2J4 239 aa20.61■□□□□ 0.89
CDK16-202ENST00000357227 KDM5BQ9UGL1 1544 aa20.6■□□□□ 0.89
CDK16-202ENST00000357227 GOLGA6L3A6NEY3 463 aa20.6■□□□□ 0.89
CDK16-202ENST00000357227 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
CDK16-202ENST00000357227 NCOA1Q15788 1441 aa20.57■□□□□ 0.88
CDK16-202ENST00000357227 KIF7Q2M1P5 1343 aa20.56■□□□□ 0.88
CDK16-202ENST00000357227 ARID3AQ99856 593 aa20.56■□□□□ 0.88
CDK16-202ENST00000357227 FHOD3Q2V2M9 1422 aa20.55■□□□□ 0.88
CDK16-202ENST00000357227 FAM161AQ3B820 660 aa20.55■□□□□ 0.88
CDK16-202ENST00000357227 C8orf34Q49A92 452 aa20.55■□□□□ 0.88
CDK16-202ENST00000357227 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
CDK16-202ENST00000357227 CCDC18Q5T9S5 1454 aa20.54■□□□□ 0.88
CDK16-202ENST00000357227 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
CDK16-202ENST00000357227 TIAM1Q13009 1591 aa20.53■□□□□ 0.88
CDK16-202ENST00000357227 ESPNB1AK53 854 aa20.52■□□□□ 0.88
CDK16-202ENST00000357227 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
CDK16-202ENST00000357227 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
CDK16-202ENST00000357227 MAP3K1Q13233 1512 aa20.51■□□□□ 0.87
CDK16-202ENST00000357227 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
CDK16-202ENST00000357227 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
CDK16-202ENST00000357227 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
CDK16-202ENST00000357227 TPM2P07951 284 aa20.5■□□□□ 0.87
CDK16-202ENST00000357227 ZHX1Q9UKY1 873 aaPredicted RBP20.5■□□□□ 0.87
CDK16-202ENST00000357227 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
CDK16-202ENST00000357227 CHIC2Q9UKJ5 165 aa20.49■□□□□ 0.87
CDK16-202ENST00000357227 PDIA4P13667 645 aaKnown RBP20.49■□□□□ 0.87
CDK16-202ENST00000357227 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.873e-7■■■■■ 33.1
CDK16-202ENST00000357227 UACAQ9BZF9 1416 aa20.47■□□□□ 0.87
CDK16-202ENST00000357227 KIAA1211Q6ZU35 1233 aa20.46■□□□□ 0.87
CDK16-202ENST00000357227 CDCA7LQ96GN5 454 aa20.46■□□□□ 0.87
CDK16-202ENST00000357227 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
CDK16-202ENST00000357227 FSD2A1L4K1 749 aa20.44■□□□□ 0.86
CDK16-202ENST00000357227 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
CDK16-202ENST00000357227 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
CDK16-202ENST00000357227 BBXQ8WY36 941 aaPredicted RBP20.44■□□□□ 0.86
CDK16-202ENST00000357227 PRDM10Q9NQV6 1147 aa20.44■□□□□ 0.86
CDK16-202ENST00000357227 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
CDK16-202ENST00000357227 C20orf194Q5TEA3 1177 aa20.43■□□□□ 0.86
CDK16-202ENST00000357227 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
CDK16-202ENST00000357227 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
CDK16-202ENST00000357227 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
CDK16-202ENST00000357227 MTUS2Q5JR59 1369 aa20.42■□□□□ 0.86
CDK16-202ENST00000357227 FAM13BQ9NYF5 915 aa20.42■□□□□ 0.86
CDK16-202ENST00000357227 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
CDK16-202ENST00000357227 SPRYD3Q8NCJ5 442 aa20.42■□□□□ 0.86
CDK16-202ENST00000357227 TRIM44Q96DX7 344 aaPredicted RBP20.41■□□□□ 0.86
CDK16-202ENST00000357227 DHX29Q7Z478 1369 aaKnown RBP20.4■□□□□ 0.86
CDK16-202ENST00000357227 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
CDK16-202ENST00000357227 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
CDK16-202ENST00000357227 FOXD1Q16676 465 aa20.37■□□□□ 0.85
CDK16-202ENST00000357227 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
CDK16-202ENST00000357227 MRE11P49959 708 aa20.36■□□□□ 0.85
CDK16-202ENST00000357227 BECN1Q14457 450 aa20.36■□□□□ 0.85
CDK16-202ENST00000357227 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
CDK16-202ENST00000357227 GRPEL1Q9HAV7 217 aa20.34■□□□□ 0.85
CDK16-202ENST00000357227 RIPK4P57078 832 aa20.34■□□□□ 0.85
CDK16-202ENST00000357227 CHMP4BQ9H444 224 aaKnown RBP20.34■□□□□ 0.85
CDK16-202ENST00000357227 PCF11O94913 1555 aaKnown RBP20.33■□□□□ 0.85
CDK16-202ENST00000357227 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
CDK16-202ENST00000357227 PTPRKQ15262 1439 aa20.33■□□□□ 0.84
CDK16-202ENST00000357227 SEC24BO95487 1268 aa20.32■□□□□ 0.84
CDK16-202ENST00000357227 GTF2E1P29083 439 aaPredicted RBP20.31■□□□□ 0.84
CDK16-202ENST00000357227 USP19O94966 1318 aa20.31■□□□□ 0.84
CDK16-202ENST00000357227 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
CDK16-202ENST00000357227 MCM4P33991 863 aa20.3■□□□□ 0.84
CDK16-202ENST00000357227 NAP1L2Q9ULW6 460 aaPredicted RBP20.3■□□□□ 0.84
CDK16-202ENST00000357227 TRAK2O60296 914 aa20.3■□□□□ 0.84
CDK16-202ENST00000357227 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
CDK16-202ENST00000357227 PTPN23Q9H3S7 1636 aa20.3■□□□□ 0.84
CDK16-202ENST00000357227 HFM1A2PYH4 1435 aa20.29■□□□□ 0.84
CDK16-202ENST00000357227 LRPPRCP42704 1394 aaKnown RBP20.26■□□□□ 0.83
CDK16-202ENST00000357227 SMAP1Q8IYB5 467 aaPredicted RBP20.25■□□□□ 0.83
CDK16-202ENST00000357227 NAIPQ13075 1403 aa20.25■□□□□ 0.83
CDK16-202ENST00000357227 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
CDK16-202ENST00000357227 FGD6Q6ZV73 1430 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms