RNA–Protein interactions for RNA: ENST00000356663.7

TMEM259-202, Transcript of transmembrane protein 259, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM259, Length 2,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-202ENST00000356663 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
TMEM259-202ENST00000356663 TCOF1Q13428 1488 aaKnown RBP28.71■■■□□ 2.19
TMEM259-202ENST00000356663 ARHGEF11O15085 1522 aa28.7■■■□□ 2.18
TMEM259-202ENST00000356663 ABCA10Q8WWZ4 1543 aa28.7■■■□□ 2.18
TMEM259-202ENST00000356663 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
TMEM259-202ENST00000356663 USP35Q9P2H5 1018 aa28.67■■■□□ 2.18
TMEM259-202ENST00000356663 SALL2Q9Y467 1007 aaPredicted RBP28.67■■■□□ 2.18
TMEM259-202ENST00000356663 KDM6BO15054 1643 aa28.66■■■□□ 2.18
TMEM259-202ENST00000356663 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
TMEM259-202ENST00000356663 RPRD2Q5VT52 1461 aaKnown RBP28.65■■■□□ 2.18
TMEM259-202ENST00000356663 IL27Q8NEV9 243 aa28.64■■■□□ 2.18
TMEM259-202ENST00000356663 NBPF8Q3BBV2 869 aa28.64■■■□□ 2.18
TMEM259-202ENST00000356663 TEX14Q8IWB6 1497 aa28.63■■■□□ 2.17
TMEM259-202ENST00000356663 DHX29Q7Z478 1369 aaKnown RBP28.61■■■□□ 2.17
TMEM259-202ENST00000356663 ANKRD30BQ9BXX2 1392 aa28.59■■■□□ 2.17
TMEM259-202ENST00000356663 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
TMEM259-202ENST00000356663 MIA2Q96PC5 1412 aa28.58■■■□□ 2.17
TMEM259-202ENST00000356663 TCERG1O14776 1098 aaKnown RBP28.57■■■□□ 2.16
TMEM259-202ENST00000356663 DNMBPQ6XZF7 1577 aa28.56■■■□□ 2.16
TMEM259-202ENST00000356663 FOXD1Q16676 465 aa28.54■■■□□ 2.16
TMEM259-202ENST00000356663 NEFMP07197 916 aa28.54■■■□□ 2.16
TMEM259-202ENST00000356663 MAGI3Q5TCQ9 1506 aa28.53■■■□□ 2.16
TMEM259-202ENST00000356663 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
TMEM259-202ENST00000356663 POLA1P09884 1462 aaPredicted RBP28.52■■■□□ 2.16
TMEM259-202ENST00000356663 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
TMEM259-202ENST00000356663 NPM2Q86SE8 214 aaKnown RBP28.5■■■□□ 2.15
TMEM259-202ENST00000356663 WASHC2CQ9Y4E1 1318 aa28.5■■■□□ 2.15
TMEM259-202ENST00000356663 PPM1GO15355 546 aaPredicted RBP28.5■■■□□ 2.15
TMEM259-202ENST00000356663 PNISRQ8TF01 805 aaKnown RBP28.49■■■□□ 2.15
TMEM259-202ENST00000356663 PDE4AP27815 886 aa28.47■■■□□ 2.15
TMEM259-202ENST00000356663 RTN4Q9NQC3 1192 aaKnown RBP28.47■■■□□ 2.15
TMEM259-202ENST00000356663 LAS1LQ9Y4W2 734 aaKnown RBP28.46■■■□□ 2.15
TMEM259-202ENST00000356663 MS4A1P11836 297 aa28.46■■■□□ 2.15
TMEM259-202ENST00000356663 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.15
TMEM259-202ENST00000356663 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
TMEM259-202ENST00000356663 RRP1P56182 461 aaKnown RBP28.44■■■□□ 2.14
TMEM259-202ENST00000356663 BACH2Q9BYV9 841 aa28.44■■■□□ 2.14
TMEM259-202ENST00000356663 TMC1Q8TDI8 760 aa28.42■■■□□ 2.14
TMEM259-202ENST00000356663 BCORL1Q5H9F3 1711 aa28.41■■■□□ 2.14
TMEM259-202ENST00000356663 ROCK1Q13464 1354 aa28.41■■■□□ 2.14
TMEM259-202ENST00000356663 CNGB1Q14028 1251 aaPredicted RBP28.38■■■□□ 2.13
TMEM259-202ENST00000356663 LRPPRCP42704 1394 aaKnown RBP28.38■■■□□ 2.13
TMEM259-202ENST00000356663 USP47Q96K76 1375 aa28.38■■■□□ 2.13
TMEM259-202ENST00000356663 EXOC6Q8TAG9 804 aa28.38■■■□□ 2.13
TMEM259-202ENST00000356663 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
TMEM259-202ENST00000356663 SLC4A1APQ9BWU0 796 aaKnown RBP28.35■■■□□ 2.13
TMEM259-202ENST00000356663 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
TMEM259-202ENST00000356663 POLR3GLQ9BT43 218 aa28.34■■■□□ 2.13
TMEM259-202ENST00000356663 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
TMEM259-202ENST00000356663 DDRGK1Q96HY6 314 aa28.32■■■□□ 2.12
TMEM259-202ENST00000356663 RCAN3Q9UKA8 241 aa28.32■■■□□ 2.12
TMEM259-202ENST00000356663 BRD4O60885 1362 aaPredicted RBP28.31■■■□□ 2.12
TMEM259-202ENST00000356663 SENP3-EIF4A1A0A087X0R7 540 aa28.31■■■□□ 2.12
TMEM259-202ENST00000356663 DAPK1P53355 1430 aa28.3■■■□□ 2.12
TMEM259-202ENST00000356663 KDM5CP41229 1560 aa28.3■■■□□ 2.12
TMEM259-202ENST00000356663 EPRSP07814 1512 aaKnown RBP28.29■■■□□ 2.12
TMEM259-202ENST00000356663 KIF14Q15058 1648 aa28.29■■■□□ 2.12
TMEM259-202ENST00000356663 KTN1Q86UP2 1357 aaKnown RBP28.29■■■□□ 2.12
TMEM259-202ENST00000356663 KIF15Q9NS87 1388 aa28.29■■■□□ 2.12
TMEM259-202ENST00000356663 NESP48681 1621 aa28.29■■■□□ 2.12
TMEM259-202ENST00000356663 DNMT1P26358 1616 aaKnown RBP28.26■■■□□ 2.12
TMEM259-202ENST00000356663 GSE1Q14687 1217 aa28.26■■■□□ 2.11
TMEM259-202ENST00000356663 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.26■■■□□ 2.11
TMEM259-202ENST00000356663 MYBBP1AQ9BQG0 1328 aaKnown RBP28.24■■■□□ 2.11
TMEM259-202ENST00000356663 PDE3BQ13370 1112 aa28.24■■■□□ 2.11
TMEM259-202ENST00000356663 RALBP1Q15311 655 aa28.22■■■□□ 2.11
TMEM259-202ENST00000356663 ABCC5O15440 1437 aa28.22■■■□□ 2.11
TMEM259-202ENST00000356663 PZPP20742 1482 aa28.19■■■□□ 2.1
TMEM259-202ENST00000356663 BRPF3Q9ULD4 1205 aa28.18■■■□□ 2.1
TMEM259-202ENST00000356663 CDK13Q14004 1512 aaKnown RBP28.18■■■□□ 2.1
TMEM259-202ENST00000356663 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
TMEM259-202ENST00000356663 ZNF326Q5BKZ1 582 aaKnown RBP28.16■■■□□ 2.1
TMEM259-202ENST00000356663 UBE2Q2Q8WVN8 375 aa28.16■■■□□ 2.1
TMEM259-202ENST00000356663 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
TMEM259-202ENST00000356663 NFKBIBQ15653 356 aa28.15■■■□□ 2.1
TMEM259-202ENST00000356663 KIAA1107Q9UPP5 1409 aa28.14■■■□□ 2.09
TMEM259-202ENST00000356663 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.09
TMEM259-202ENST00000356663 RALGAPBQ86X10 1494 aa28.13■■■□□ 2.09
TMEM259-202ENST00000356663 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
TMEM259-202ENST00000356663 WDR62O43379 1518 aa28.11■■■□□ 2.09
TMEM259-202ENST00000356663 E9PCH4 1651 aa28.08■■■□□ 2.09
TMEM259-202ENST00000356663 NLRP13Q86W25 1043 aa28.07■■■□□ 2.08
TMEM259-202ENST00000356663 DAXXQ9UER7 740 aaPredicted RBP28.06■■■□□ 2.08
TMEM259-202ENST00000356663 FRAT1Q92837 279 aaPredicted RBP28.05■■■□□ 2.08
TMEM259-202ENST00000356663 CARD11Q9BXL7 1154 aa28.05■■■□□ 2.08
TMEM259-202ENST00000356663 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
TMEM259-202ENST00000356663 ZNF644Q9H582 1327 aaPredicted RBP28.02■■■□□ 2.08
TMEM259-202ENST00000356663 IQGAP2Q13576 1575 aa28.01■■■□□ 2.08
TMEM259-202ENST00000356663 ADGBQ8N7X0 1667 aa28■■■□□ 2.07
TMEM259-202ENST00000356663 CRBNQ96SW2 442 aa28■■■□□ 2.07
TMEM259-202ENST00000356663 ARHGEF12Q9NZN5 1544 aa28■■■□□ 2.07
TMEM259-202ENST00000356663 PARD3Q8TEW0 1356 aa28■■■□□ 2.07
TMEM259-202ENST00000356663 PKD2Q13563 968 aa27.99■■■□□ 2.07
TMEM259-202ENST00000356663 CDCA7LQ96GN5 454 aa27.99■■■□□ 2.07
TMEM259-202ENST00000356663 INSRP06213 1382 aa27.98■■■□□ 2.07
TMEM259-202ENST00000356663 ST20-MTHFSA0A0A6YYL1 179 aa27.98■■■□□ 2.07
TMEM259-202ENST00000356663 PLIN1O60240 522 aa27.98■■■□□ 2.07
TMEM259-202ENST00000356663 ZMYM4Q5VZL5 1548 aa27.97■■■□□ 2.07
TMEM259-202ENST00000356663 ARID3CA6NKF2 412 aa27.95■■■□□ 2.07
TMEM259-202ENST00000356663 SKAP1Q86WV1 359 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms