RNA–Protein interactions for RNA: ENST00000355832.9

ERCC6-201, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC6, Length 8,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-201ENST00000355832 PKNOX2Q96KN3 472 aa11.27□□□□□ -0.61
ERCC6-201ENST00000355832 HTATSF1O43719 755 aaKnown RBP11.26□□□□□ -0.61
ERCC6-201ENST00000355832 ZNF771Q7L3S4 317 aaPredicted RBP11.26□□□□□ -0.61
ERCC6-201ENST00000355832 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
ERCC6-201ENST00000355832 RGL3Q3MIN7 710 aa11.26□□□□□ -0.61
ERCC6-201ENST00000355832 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
ERCC6-201ENST00000355832 SIN3AQ96ST3 1273 aa11.25□□□□□ -0.61
ERCC6-201ENST00000355832 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
ERCC6-201ENST00000355832 KIAA1211Q6ZU35 1233 aa11.23□□□□□ -0.61
ERCC6-201ENST00000355832 PMFBP1Q8TBY8 1022 aa11.23□□□□□ -0.61
ERCC6-201ENST00000355832 CCNB3Q8WWL7 1395 aa11.23□□□□□ -0.61
ERCC6-201ENST00000355832 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
ERCC6-201ENST00000355832 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
ERCC6-201ENST00000355832 IPO8O15397 1037 aaKnown RBP11.22□□□□□ -0.61
ERCC6-201ENST00000355832 KTN1Q86UP2 1357 aaKnown RBP11.21□□□□□ -0.61
ERCC6-201ENST00000355832 TMF1P82094 1093 aa11.21□□□□□ -0.62
ERCC6-201ENST00000355832 SKOR2Q2VWA4 1001 aaPredicted RBP11.2□□□□□ -0.62
ERCC6-201ENST00000355832 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
ERCC6-201ENST00000355832 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
ERCC6-201ENST00000355832 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
ERCC6-201ENST00000355832 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
ERCC6-201ENST00000355832 MFAP1P55081 439 aaKnown RBP11.18□□□□□ -0.62
ERCC6-201ENST00000355832 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
ERCC6-201ENST00000355832 SETD5Q9C0A6 1442 aa11.18□□□□□ -0.62
ERCC6-201ENST00000355832 GPS2Q13227 327 aa11.17□□□□□ -0.62
ERCC6-201ENST00000355832 RALBP1Q15311 655 aa11.16□□□□□ -0.62
ERCC6-201ENST00000355832 A0A0G2JS52 829 aa11.16□□□□□ -0.62
ERCC6-201ENST00000355832 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
ERCC6-201ENST00000355832 TEX35Q5T0J7 233 aa11.16□□□□□ -0.62
ERCC6-201ENST00000355832 CCDC34Q96HJ3 373 aa11.16□□□□□ -0.62
ERCC6-201ENST00000355832 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.62
ERCC6-201ENST00000355832 FHAD1B1AJZ9 1412 aa11.15□□□□□ -0.62
ERCC6-201ENST00000355832 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
ERCC6-201ENST00000355832 ST18O60284 1047 aa11.15□□□□□ -0.63
ERCC6-201ENST00000355832 GOLGA2Q08379 1002 aa11.15□□□□□ -0.63
ERCC6-201ENST00000355832 MTERF4Q7Z6M4 381 aaKnown RBP11.14□□□□□ -0.63
ERCC6-201ENST00000355832 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
ERCC6-201ENST00000355832 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
ERCC6-201ENST00000355832 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
ERCC6-201ENST00000355832 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
ERCC6-201ENST00000355832 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
ERCC6-201ENST00000355832 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
ERCC6-201ENST00000355832 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
ERCC6-201ENST00000355832 MAP7D2Q96T17 732 aa11.12□□□□□ -0.63
ERCC6-201ENST00000355832 CFDP1Q9UEE9 299 aaPredicted RBP11.12□□□□□ -0.63
ERCC6-201ENST00000355832 CENPQQ7L2Z9 268 aaPredicted RBP11.12□□□□□ -0.63
ERCC6-201ENST00000355832 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
ERCC6-201ENST00000355832 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
ERCC6-201ENST00000355832 PHLDB1Q86UU1 1377 aa11.12□□□□□ -0.63
ERCC6-201ENST00000355832 PDE4AP27815 886 aa11.11□□□□□ -0.63
ERCC6-201ENST00000355832 TPM3P06753 285 aa11.11□□□□□ -0.63
ERCC6-201ENST00000355832 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
ERCC6-201ENST00000355832 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
ERCC6-201ENST00000355832 FAM43AQ8N2R8 423 aa11.11□□□□□ -0.63
ERCC6-201ENST00000355832 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
ERCC6-201ENST00000355832 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
ERCC6-201ENST00000355832 DCAF11Q8TEB1 546 aa11.1□□□□□ -0.63
ERCC6-201ENST00000355832 MORC1Q86VD1 984 aa11.1□□□□□ -0.63
ERCC6-201ENST00000355832 PLEKHD1A6NEE1 506 aa11.1□□□□□ -0.63
ERCC6-201ENST00000355832 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
ERCC6-201ENST00000355832 CLSTN1O94985 981 aa11.09□□□□□ -0.63
ERCC6-201ENST00000355832 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
ERCC6-201ENST00000355832 APBB1O00213 710 aa11.09□□□□□ -0.63
ERCC6-201ENST00000355832 POGKQ9P215 609 aa11.09□□□□□ -0.63
ERCC6-201ENST00000355832 SENP3Q9H4L4 574 aaPredicted RBP11.09□□□□□ -0.63
ERCC6-201ENST00000355832 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
ERCC6-201ENST00000355832 RRP12Q5JTH9 1297 aaKnown RBP11.08□□□□□ -0.64
ERCC6-201ENST00000355832 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
ERCC6-201ENST00000355832 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
ERCC6-201ENST00000355832 ATP6V1DQ9Y5K8 247 aa11.08□□□□□ -0.64
ERCC6-201ENST00000355832 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
ERCC6-201ENST00000355832 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
ERCC6-201ENST00000355832 TAF7LQ5H9L4 462 aa11.06□□□□□ -0.64
ERCC6-201ENST00000355832 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
ERCC6-201ENST00000355832 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
ERCC6-201ENST00000355832 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
ERCC6-201ENST00000355832 TPM2P07951 284 aa11.05□□□□□ -0.64
ERCC6-201ENST00000355832 CCAR2Q8N163 923 aaKnown RBP11.05□□□□□ -0.64
ERCC6-201ENST00000355832 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
ERCC6-201ENST00000355832 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
ERCC6-201ENST00000355832 SMC4Q9NTJ3 1288 aa11.05□□□□□ -0.64
ERCC6-201ENST00000355832 ZBED9Q6R2W3 1325 aa11.04□□□□□ -0.64
ERCC6-201ENST00000355832 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
ERCC6-201ENST00000355832 HMMRO75330 724 aa11.04□□□□□ -0.64
ERCC6-201ENST00000355832 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
ERCC6-201ENST00000355832 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
ERCC6-201ENST00000355832 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
ERCC6-201ENST00000355832 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
ERCC6-201ENST00000355832 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
ERCC6-201ENST00000355832 CWC15Q9P013 229 aaKnown RBP11.02□□□□□ -0.64
ERCC6-201ENST00000355832 BECN2A8MW95 431 aa11.02□□□□□ -0.64
ERCC6-201ENST00000355832 TPM1P09493 284 aa11.02□□□□□ -0.65
ERCC6-201ENST00000355832 RDXP35241 583 aaKnown RBP11.02□□□□□ -0.65
ERCC6-201ENST00000355832 NPHP1O15259 732 aa11.01□□□□□ -0.65
ERCC6-201ENST00000355832 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
ERCC6-201ENST00000355832 FOXD4L4Q8WXT5 416 aaPredicted RBP11.01□□□□□ -0.65
ERCC6-201ENST00000355832 PRM3Q9NNZ6 103 aa11.01□□□□□ -0.65
ERCC6-201ENST00000355832 KIF15Q9NS87 1388 aa11.01□□□□□ -0.65
ERCC6-201ENST00000355832 DIAPH3Q9NSV4 1193 aa11.01□□□□□ -0.65
ERCC6-201ENST00000355832 SF3A1Q15459 793 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms