RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 PRG4Q92954 1404 aaPredicted RBP19.12■□□□□ 0.65
EBF3-201ENST00000355311 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
EBF3-201ENST00000355311 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
EBF3-201ENST00000355311 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
EBF3-201ENST00000355311 PKD2Q13563 968 aa19.08■□□□□ 0.64
EBF3-201ENST00000355311 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
EBF3-201ENST00000355311 SUPT6HQ7KZ85 1726 aaKnown RBP19.07■□□□□ 0.64
EBF3-201ENST00000355311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
EBF3-201ENST00000355311 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
EBF3-201ENST00000355311 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
EBF3-201ENST00000355311 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
EBF3-201ENST00000355311 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
EBF3-201ENST00000355311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
EBF3-201ENST00000355311 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
EBF3-201ENST00000355311 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
EBF3-201ENST00000355311 ERCC6Q03468 1493 aa19.05■□□□□ 0.64
EBF3-201ENST00000355311 PLB1Q6P1J6 1458 aa19.05■□□□□ 0.64
EBF3-201ENST00000355311 UGGT2Q9NYU1 1516 aa19.04■□□□□ 0.64
EBF3-201ENST00000355311 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
EBF3-201ENST00000355311 EHBP1L1Q8N3D4 1523 aa19.02■□□□□ 0.64
EBF3-201ENST00000355311 PRKCSHP14314 528 aaPredicted RBP19.01■□□□□ 0.63
EBF3-201ENST00000355311 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
EBF3-201ENST00000355311 ABCC5O15440 1437 aa18.99■□□□□ 0.63
EBF3-201ENST00000355311 PRKRIP1Q9H875 184 aaPredicted RBP18.98■□□□□ 0.63
EBF3-201ENST00000355311 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
EBF3-201ENST00000355311 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
EBF3-201ENST00000355311 PLEKHD1A6NEE1 506 aa18.97■□□□□ 0.63
EBF3-201ENST00000355311 DAPK1P53355 1430 aa18.96■□□□□ 0.63
EBF3-201ENST00000355311 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
EBF3-201ENST00000355311 DCAF11Q8TEB1 546 aa18.94■□□□□ 0.62
EBF3-201ENST00000355311 NUP153P49790 1475 aaKnown RBP18.94■□□□□ 0.62
EBF3-201ENST00000355311 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
EBF3-201ENST00000355311 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
EBF3-201ENST00000355311 DISP1Q96F81 1524 aa18.92■□□□□ 0.62
EBF3-201ENST00000355311 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
EBF3-201ENST00000355311 HECW1Q76N89 1606 aa18.91■□□□□ 0.62
EBF3-201ENST00000355311 CCDC7Q96M83 1385 aa18.91■□□□□ 0.62
EBF3-201ENST00000355311 NUP155O75694 1391 aa18.9■□□□□ 0.62
EBF3-201ENST00000355311 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
EBF3-201ENST00000355311 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
EBF3-201ENST00000355311 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.61
EBF3-201ENST00000355311 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
EBF3-201ENST00000355311 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
EBF3-201ENST00000355311 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
EBF3-201ENST00000355311 KIAA0586Q9BVV6 1533 aa18.85■□□□□ 0.61
EBF3-201ENST00000355311 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
EBF3-201ENST00000355311 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
EBF3-201ENST00000355311 TCOF1Q13428 1488 aaKnown RBP18.83■□□□□ 0.61
EBF3-201ENST00000355311 CNTLNQ9NXG0 1405 aa18.81■□□□□ 0.6
EBF3-201ENST00000355311 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
EBF3-201ENST00000355311 NCOA1Q15788 1441 aa18.8■□□□□ 0.6
EBF3-201ENST00000355311 USP47Q96K76 1375 aa18.79■□□□□ 0.6
EBF3-201ENST00000355311 MYT1LQ9UL68 1186 aa18.79■□□□□ 0.6
EBF3-201ENST00000355311 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
EBF3-201ENST00000355311 NBR1Q14596 966 aa18.79■□□□□ 0.6
EBF3-201ENST00000355311 KIF14Q15058 1648 aa18.79■□□□□ 0.6
EBF3-201ENST00000355311 DEKP35659 375 aaKnown RBP18.78■□□□□ 0.6
EBF3-201ENST00000355311 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
EBF3-201ENST00000355311 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
EBF3-201ENST00000355311 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
EBF3-201ENST00000355311 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
EBF3-201ENST00000355311 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
EBF3-201ENST00000355311 TROQ12816 1431 aaPredicted RBP18.77■□□□□ 0.6
EBF3-201ENST00000355311 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.59
EBF3-201ENST00000355311 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
EBF3-201ENST00000355311 AKNAQ7Z591 1439 aa18.75■□□□□ 0.59
EBF3-201ENST00000355311 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
EBF3-201ENST00000355311 ANKRD30AQ9BXX3 1397 aa18.74■□□□□ 0.59
EBF3-201ENST00000355311 PZPP20742 1482 aa18.74■□□□□ 0.59
EBF3-201ENST00000355311 RAPGEF6Q8TEU7 1601 aa18.73■□□□□ 0.59
EBF3-201ENST00000355311 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
EBF3-201ENST00000355311 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
EBF3-201ENST00000355311 TEX14Q8IWB6 1497 aa18.71■□□□□ 0.59
EBF3-201ENST00000355311 NUP160Q12769 1436 aa18.7■□□□□ 0.58
EBF3-201ENST00000355311 ROCK1Q13464 1354 aa18.69■□□□□ 0.58
EBF3-201ENST00000355311 GCC2Q8IWJ2 1684 aa18.69■□□□□ 0.58
EBF3-201ENST00000355311 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
EBF3-201ENST00000355311 ATP10BO94823 1461 aa18.68■□□□□ 0.58
EBF3-201ENST00000355311 PTPRGP23470 1445 aa18.67■□□□□ 0.58
EBF3-201ENST00000355311 KIAA1107Q9UPP5 1409 aa18.67■□□□□ 0.58
EBF3-201ENST00000355311 FANCIQ9NVI1 1328 aa18.67■□□□□ 0.58
EBF3-201ENST00000355311 C9orf84Q5VXU9 1444 aa18.65■□□□□ 0.58
EBF3-201ENST00000355311 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
EBF3-201ENST00000355311 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
EBF3-201ENST00000355311 PPP4R2Q9NY27 417 aa18.64■□□□□ 0.57
EBF3-201ENST00000355311 ROCK2O75116 1388 aaKnown RBP18.64■□□□□ 0.57
EBF3-201ENST00000355311 SKAP1Q86WV1 359 aa18.63■□□□□ 0.57
EBF3-201ENST00000355311 CCDC136Q96JN2 1154 aa18.63■□□□□ 0.57
EBF3-201ENST00000355311 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
EBF3-201ENST00000355311 PAK3O75914 559 aaPredicted RBP18.62■□□□□ 0.57
EBF3-201ENST00000355311 RTN4Q9NQC3 1192 aaKnown RBP18.61■□□□□ 0.57
EBF3-201ENST00000355311 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
EBF3-201ENST00000355311 DHX29Q7Z478 1369 aaKnown RBP18.6■□□□□ 0.57
EBF3-201ENST00000355311 CHD1O14646 1710 aa18.6■□□□□ 0.57
EBF3-201ENST00000355311 PLIN1O60240 522 aa18.6■□□□□ 0.57
EBF3-201ENST00000355311 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
EBF3-201ENST00000355311 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
EBF3-201ENST00000355311 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
EBF3-201ENST00000355311 BCORL1Q5H9F3 1711 aa18.57■□□□□ 0.56
EBF3-201ENST00000355311 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms