RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 CFAP53Q96M91 514 aa10.1□□□□□ -0.79
SCN8A-201ENST00000354534 PODXL2Q9NZ53 605 aa10.1□□□□□ -0.79
SCN8A-201ENST00000354534 TSR1Q2NL82 804 aaKnown RBP10.1□□□□□ -0.79
SCN8A-201ENST00000354534 RASSF8Q8NHQ8 419 aa10.1□□□□□ -0.79
SCN8A-201ENST00000354534 KIAA1211Q6ZU35 1233 aa10.1□□□□□ -0.79
SCN8A-201ENST00000354534 HMMRO75330 724 aa10.09□□□□□ -0.79
SCN8A-201ENST00000354534 RDXP35241 583 aaKnown RBP10.09□□□□□ -0.79
SCN8A-201ENST00000354534 CCDC34Q96HJ3 373 aa10.08□□□□□ -0.8
SCN8A-201ENST00000354534 SLKQ9H2G2 1235 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-201ENST00000354534 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
SCN8A-201ENST00000354534 TPD52L1Q16890 204 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-201ENST00000354534 ZNF592Q92610 1267 aa10.08□□□□□ -0.8
SCN8A-201ENST00000354534 CALD1Q05682 793 aaKnown RBP10.07□□□□□ -0.8
SCN8A-201ENST00000354534 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
SCN8A-201ENST00000354534 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
SCN8A-201ENST00000354534 PHF14O94880 888 aa10.07□□□□□ -0.8
SCN8A-201ENST00000354534 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
SCN8A-201ENST00000354534 HSP90AB3PQ58FF7 597 aa10.06□□□□□ -0.8
SCN8A-201ENST00000354534 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
SCN8A-201ENST00000354534 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
SCN8A-201ENST00000354534 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
SCN8A-201ENST00000354534 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCN8A-201ENST00000354534 FAM13BQ9NYF5 915 aa10.04□□□□□ -0.8
SCN8A-201ENST00000354534 H0YHG0 523 aa10.04□□□□□ -0.8
SCN8A-201ENST00000354534 MS4A1P11836 297 aa10.04□□□□□ -0.8
SCN8A-201ENST00000354534 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCN8A-201ENST00000354534 RUFY1Q96T51 708 aa10.04□□□□□ -0.8
SCN8A-201ENST00000354534 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCN8A-201ENST00000354534 VPS53Q5VIR6 699 aa10.03□□□□□ -0.8
SCN8A-201ENST00000354534 APBB1O00213 710 aa10.03□□□□□ -0.8
SCN8A-201ENST00000354534 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCN8A-201ENST00000354534 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
SCN8A-201ENST00000354534 AK7Q96M32 723 aa10.02□□□□□ -0.8
SCN8A-201ENST00000354534 KNSTRNQ9Y448 316 aa10.02□□□□□ -0.81
SCN8A-201ENST00000354534 GOLGA6L19H0YKK7 550 aa10.02□□□□□ -0.81
SCN8A-201ENST00000354534 SOX12O15370 315 aa10.01□□□□□ -0.81
SCN8A-201ENST00000354534 TPM2P07951 284 aa10.01□□□□□ -0.81
SCN8A-201ENST00000354534 RGL3Q3MIN7 710 aa10□□□□□ -0.81
SCN8A-201ENST00000354534 TPM1P09493 284 aa10□□□□□ -0.81
SCN8A-201ENST00000354534 CNKSR2Q8WXI2 1034 aa10□□□□□ -0.81
SCN8A-201ENST00000354534 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
SCN8A-201ENST00000354534 PKNOX2Q96KN3 472 aa10□□□□□ -0.81
SCN8A-201ENST00000354534 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.81
SCN8A-201ENST00000354534 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
SCN8A-201ENST00000354534 MARCH6O60337 910 aa9.99□□□□□ -0.81
SCN8A-201ENST00000354534 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
SCN8A-201ENST00000354534 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
SCN8A-201ENST00000354534 DYDC1Q8WWB3 177 aa9.99□□□□□ -0.81
SCN8A-201ENST00000354534 SF3A1Q15459 793 aaKnown RBP9.98□□□□□ -0.81
SCN8A-201ENST00000354534 CWC15Q9P013 229 aaKnown RBP9.98□□□□□ -0.81
SCN8A-201ENST00000354534 CDR1P51861 262 aa9.98□□□□□ -0.81
SCN8A-201ENST00000354534 MTUS2Q5JR59 1369 aa9.98□□□□□ -0.81
SCN8A-201ENST00000354534 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
SCN8A-201ENST00000354534 DHX37Q8IY37 1157 aaKnown RBP9.98□□□□□ -0.81
SCN8A-201ENST00000354534 DCTN1Q14203 1278 aa9.98□□□□□ -0.81
SCN8A-201ENST00000354534 NOL8Q76FK4 1167 aaKnown RBP9.97□□□□□ -0.81
SCN8A-201ENST00000354534 NEFHP12036 1026 aa9.97□□□□□ -0.81
SCN8A-201ENST00000354534 HOMER1Q86YM7 354 aa9.97□□□□□ -0.81
SCN8A-201ENST00000354534 NUDCQ9Y266 331 aa9.97□□□□□ -0.81
SCN8A-201ENST00000354534 U2SURPO15042 1029 aaKnown RBP9.97□□□□□ -0.81
SCN8A-201ENST00000354534 TSPY4P0CV99 314 aa9.96□□□□□ -0.81
SCN8A-201ENST00000354534 TSPY10P0CW01 314 aa9.96□□□□□ -0.81
SCN8A-201ENST00000354534 SKIDA1Q1XH10 827 aa9.96□□□□□ -0.82
SCN8A-201ENST00000354534 ZNF330Q9Y3S2 320 aaPredicted RBP9.95□□□□□ -0.82
SCN8A-201ENST00000354534 BECN2A8MW95 431 aa9.95□□□□□ -0.82
SCN8A-201ENST00000354534 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
SCN8A-201ENST00000354534 BCCIPQ9P287 314 aaKnown RBP eCLIP9.94□□□□□ -0.82
SCN8A-201ENST00000354534 MFAP1P55081 439 aaKnown RBP9.94□□□□□ -0.82
SCN8A-201ENST00000354534 NEXNQ0ZGT2 675 aa9.94□□□□□ -0.82
SCN8A-201ENST00000354534 HSP90B2PQ58FF3 399 aa9.94□□□□□ -0.82
SCN8A-201ENST00000354534 ACBD3Q9H3P7 528 aa9.94□□□□□ -0.82
SCN8A-201ENST00000354534 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
SCN8A-201ENST00000354534 IPO7O95373 1038 aaKnown RBP9.94□□□□□ -0.82
SCN8A-201ENST00000354534 RSF1Q96T23 1441 aaPredicted RBP9.94□□□□□ -0.82
SCN8A-201ENST00000354534 NAP1L1P55209 391 aaKnown RBP9.93□□□□□ -0.82
SCN8A-201ENST00000354534 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
SCN8A-201ENST00000354534 ODF2Q5BJF6 829 aa9.93□□□□□ -0.82
SCN8A-201ENST00000354534 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
SCN8A-201ENST00000354534 CLIP1P30622 1438 aa9.93□□□□□ -0.82
SCN8A-201ENST00000354534 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
SCN8A-201ENST00000354534 CCDC66A2RUB6 948 aa9.92□□□□□ -0.82
SCN8A-201ENST00000354534 H3BQV1 296 aa9.92□□□□□ -0.82
SCN8A-201ENST00000354534 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
SCN8A-201ENST00000354534 GORABQ5T7V8 394 aa9.92□□□□□ -0.82
SCN8A-201ENST00000354534 TSPYL1Q9H0U9 437 aa9.92□□□□□ -0.82
SCN8A-201ENST00000354534 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-201ENST00000354534 KIF16BQ96L93 1317 aa9.91□□□□□ -0.82
SCN8A-201ENST00000354534 ARGLU1Q9NWB6 273 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-201ENST00000354534 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
SCN8A-201ENST00000354534 TMX4Q9H1E5 349 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-201ENST00000354534 GPATCH3Q96I76 525 aa9.9□□□□□ -0.82
SCN8A-201ENST00000354534 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
SCN8A-201ENST00000354534 DDX11L8A8MPP1 907 aa9.9□□□□□ -0.82
SCN8A-201ENST00000354534 ABCC9O60706 1549 aa9.9□□□□□ -0.82
SCN8A-201ENST00000354534 CLASRPQ8N2M8 674 aaKnown RBP9.9□□□□□ -0.83
SCN8A-201ENST00000354534 TCEAL9Q9UHQ7 104 aa9.9□□□□□ -0.83
SCN8A-201ENST00000354534 CT47A1Q5JQC4 288 aaPredicted RBP9.89□□□□□ -0.83
SCN8A-201ENST00000354534 RRP7BPQ9NSQ0 103 aa9.89□□□□□ -0.83
SCN8A-201ENST00000354534 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
SCN8A-201ENST00000354534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms