RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 IPO9Q96P70 1041 aaKnown RBP23.99■■□□□ 1.43
CTSB-202ENST00000353047 CANXP27824 592 aaKnown RBP23.97■■□□□ 1.43
CTSB-202ENST00000353047 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
CTSB-202ENST00000353047 RCAN3Q9UKA8 241 aa23.95■■□□□ 1.42
CTSB-202ENST00000353047 NCOA2Q15596 1464 aa23.94■■□□□ 1.42
CTSB-202ENST00000353047 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
CTSB-202ENST00000353047 PCF11O94913 1555 aaKnown RBP23.93■■□□□ 1.42
CTSB-202ENST00000353047 NAIPQ13075 1403 aa23.93■■□□□ 1.42
CTSB-202ENST00000353047 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
CTSB-202ENST00000353047 CDCA7LQ96GN5 454 aa23.92■■□□□ 1.42
CTSB-202ENST00000353047 CNTLNQ9NXG0 1405 aa23.92■■□□□ 1.42
CTSB-202ENST00000353047 NEUROD2Q15784 382 aa23.91■■□□□ 1.42
CTSB-202ENST00000353047 NESP48681 1621 aa23.91■■□□□ 1.42
CTSB-202ENST00000353047 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
CTSB-202ENST00000353047 MYOM3Q5VTT5 1437 aa23.9■■□□□ 1.42
CTSB-202ENST00000353047 IL27Q8NEV9 243 aa23.88■■□□□ 1.41
CTSB-202ENST00000353047 ERICH6BQ5W0A0 696 aa23.88■■□□□ 1.41
CTSB-202ENST00000353047 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
CTSB-202ENST00000353047 WDR43Q15061 677 aaKnown RBP eCLIP23.86■■□□□ 1.41
CTSB-202ENST00000353047 USP47Q96K76 1375 aa23.86■■□□□ 1.41
CTSB-202ENST00000353047 TNNT2P45379 298 aaPredicted RBP23.85■■□□□ 1.41
CTSB-202ENST00000353047 HFM1A2PYH4 1435 aa23.85■■□□□ 1.41
CTSB-202ENST00000353047 NUP155O75694 1391 aa23.84■■□□□ 1.41
CTSB-202ENST00000353047 PDE4AP27815 886 aa23.83■■□□□ 1.41
CTSB-202ENST00000353047 HNRNPMP52272 730 aaKnown RBP eCLIP23.82■■□□□ 1.4
CTSB-202ENST00000353047 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
CTSB-202ENST00000353047 PLEKHD1A6NEE1 506 aa23.81■■□□□ 1.4
CTSB-202ENST00000353047 CHGAP10645 457 aaKnown RBP23.81■■□□□ 1.4
CTSB-202ENST00000353047 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
CTSB-202ENST00000353047 RRP1P56182 461 aaKnown RBP23.78■■□□□ 1.4
CTSB-202ENST00000353047 PDS5BQ9NTI5 1447 aa23.77■■□□□ 1.4
CTSB-202ENST00000353047 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
CTSB-202ENST00000353047 CRBNQ96SW2 442 aa23.76■■□□□ 1.39
CTSB-202ENST00000353047 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
CTSB-202ENST00000353047 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
CTSB-202ENST00000353047 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
CTSB-202ENST00000353047 FRAT1Q92837 279 aaPredicted RBP23.73■■□□□ 1.39
CTSB-202ENST00000353047 ROCK2O75116 1388 aaKnown RBP23.72■■□□□ 1.39
CTSB-202ENST00000353047 PNISRQ8TF01 805 aaKnown RBP23.72■■□□□ 1.39
CTSB-202ENST00000353047 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
CTSB-202ENST00000353047 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
CTSB-202ENST00000353047 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
CTSB-202ENST00000353047 PANK3Q9H999 370 aa23.68■■□□□ 1.38
CTSB-202ENST00000353047 SLKQ9H2G2 1235 aaPredicted RBP23.65■■□□□ 1.38
CTSB-202ENST00000353047 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
CTSB-202ENST00000353047 CDK13Q14004 1512 aaKnown RBP23.64■■□□□ 1.38
CTSB-202ENST00000353047 NLRP13Q86W25 1043 aa23.64■■□□□ 1.37
CTSB-202ENST00000353047 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.37
CTSB-202ENST00000353047 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
CTSB-202ENST00000353047 MYBBP1AQ9BQG0 1328 aaKnown RBP23.62■■□□□ 1.37
CTSB-202ENST00000353047 PPM1GO15355 546 aaPredicted RBP23.62■■□□□ 1.37
CTSB-202ENST00000353047 BRPF3Q9ULD4 1205 aa23.61■■□□□ 1.37
CTSB-202ENST00000353047 C20orf194Q5TEA3 1177 aa23.59■■□□□ 1.37
CTSB-202ENST00000353047 RALBP1Q15311 655 aa23.58■■□□□ 1.37
CTSB-202ENST00000353047 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.37
CTSB-202ENST00000353047 DDRGK1Q96HY6 314 aa23.56■■□□□ 1.36
CTSB-202ENST00000353047 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.56■■□□□ 1.36
CTSB-202ENST00000353047 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
CTSB-202ENST00000353047 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
CTSB-202ENST00000353047 BCL2L13Q9BXK5 485 aa23.55■■□□□ 1.36
CTSB-202ENST00000353047 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
CTSB-202ENST00000353047 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
CTSB-202ENST00000353047 CLUAP1Q96AJ1 413 aa23.54■■□□□ 1.36
CTSB-202ENST00000353047 RRP7AQ9Y3A4 280 aaKnown RBP23.53■■□□□ 1.36
CTSB-202ENST00000353047 TMF1P82094 1093 aa23.52■■□□□ 1.36
CTSB-202ENST00000353047 ADAMTS8Q9UP79 889 aa23.52■■□□□ 1.36
CTSB-202ENST00000353047 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
CTSB-202ENST00000353047 GZF1Q9H116 711 aaPredicted RBP23.5■■□□□ 1.35
CTSB-202ENST00000353047 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
CTSB-202ENST00000353047 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
CTSB-202ENST00000353047 SMG6Q86US8 1419 aaKnown RBP23.49■■□□□ 1.35
CTSB-202ENST00000353047 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
CTSB-202ENST00000353047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.352e-6■■□□□ 11.9
CTSB-202ENST00000353047 BACH2Q9BYV9 841 aa23.47■■□□□ 1.35
CTSB-202ENST00000353047 APAF1O14727 1248 aa23.45■■□□□ 1.34
CTSB-202ENST00000353047 NFKBIBQ15653 356 aa23.45■■□□□ 1.34
CTSB-202ENST00000353047 SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
CTSB-202ENST00000353047 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
CTSB-202ENST00000353047 ARID4BQ4LE39 1312 aaPredicted RBP23.41■■□□□ 1.34
CTSB-202ENST00000353047 UPF2Q9HAU5 1272 aaKnown RBP23.41■■□□□ 1.34
CTSB-202ENST00000353047 FRAT2O75474 233 aaPredicted RBP23.41■■□□□ 1.34
CTSB-202ENST00000353047 COG6Q9Y2V7 657 aa23.41■■□□□ 1.34
CTSB-202ENST00000353047 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
CTSB-202ENST00000353047 DAPK1P53355 1430 aa23.4■■□□□ 1.34
CTSB-202ENST00000353047 EFCAB5A4FU69 1503 aa23.39■■□□□ 1.34
CTSB-202ENST00000353047 GSE1Q14687 1217 aa23.39■■□□□ 1.34
CTSB-202ENST00000353047 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
CTSB-202ENST00000353047 ANKRD50Q9ULJ7 1429 aa23.38■■□□□ 1.33
CTSB-202ENST00000353047 ABCC5O15440 1437 aa23.38■■□□□ 1.33
CTSB-202ENST00000353047 EPRSP07814 1512 aaKnown RBP23.37■■□□□ 1.33
CTSB-202ENST00000353047 NUTM2DQ5VT03 806 aaPredicted RBP23.37■■□□□ 1.33
CTSB-202ENST00000353047 BCAR3O75815 825 aa23.37■■□□□ 1.33
CTSB-202ENST00000353047 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
CTSB-202ENST00000353047 HSP90AA1P07900 732 aaKnown RBP23.34■■□□□ 1.33
CTSB-202ENST00000353047 EHBP1L1Q8N3D4 1523 aa23.34■■□□□ 1.33
CTSB-202ENST00000353047 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
CTSB-202ENST00000353047 SUPT6HQ7KZ85 1726 aaKnown RBP23.33■■□□□ 1.33
CTSB-202ENST00000353047 PANK1Q8TE04 598 aa23.33■■□□□ 1.33
CTSB-202ENST00000353047 SNAPC4Q5SXM2 1469 aa23.33■■□□□ 1.32
CTSB-202ENST00000353047 RPRD2Q5VT52 1461 aaKnown RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms