RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
PTBP1-201ENST00000349038 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
PTBP1-201ENST00000349038 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
PTBP1-201ENST00000349038 LRRIQ1Q96JM4 1722 aa20.46■□□□□ 0.87
PTBP1-201ENST00000349038 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
PTBP1-201ENST00000349038 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
PTBP1-201ENST00000349038 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
PTBP1-201ENST00000349038 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
PTBP1-201ENST00000349038 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
PTBP1-201ENST00000349038 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
PTBP1-201ENST00000349038 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
PTBP1-201ENST00000349038 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
PTBP1-201ENST00000349038 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
PTBP1-201ENST00000349038 EHBP1L1Q8N3D4 1523 aa20.4■□□□□ 0.86
PTBP1-201ENST00000349038 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
PTBP1-201ENST00000349038 DENND4BO75064 1496 aaPredicted RBP20.39■□□□□ 0.86
PTBP1-201ENST00000349038 ARHGEF11O15085 1522 aa20.39■□□□□ 0.86
PTBP1-201ENST00000349038 UBE2Q2Q8WVN8 375 aa20.38■□□□□ 0.85
PTBP1-201ENST00000349038 UGGT2Q9NYU1 1516 aa20.38■□□□□ 0.85
PTBP1-201ENST00000349038 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
PTBP1-201ENST00000349038 FOXD1Q16676 465 aa20.36■□□□□ 0.85
PTBP1-201ENST00000349038 GCC2Q8IWJ2 1684 aa20.36■□□□□ 0.85
PTBP1-201ENST00000349038 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
PTBP1-201ENST00000349038 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
PTBP1-201ENST00000349038 TCOF1Q13428 1488 aaKnown RBP20.35■□□□□ 0.85
PTBP1-201ENST00000349038 MAGI3Q5TCQ9 1506 aa20.31■□□□□ 0.84
PTBP1-201ENST00000349038 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.841e-7■□□□□ 8.1
PTBP1-201ENST00000349038 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
PTBP1-201ENST00000349038 PRKRIP1Q9H875 184 aaPredicted RBP20.3■□□□□ 0.84
PTBP1-201ENST00000349038 C11orf95C9JLR9 678 aaPredicted RBP20.3■□□□□ 0.84
PTBP1-201ENST00000349038 ABCA5Q8WWZ7 1642 aa20.29■□□□□ 0.84
PTBP1-201ENST00000349038 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
PTBP1-201ENST00000349038 KDM6BO15054 1643 aa20.28■□□□□ 0.84
PTBP1-201ENST00000349038 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.84
PTBP1-201ENST00000349038 EXOC6Q8TAG9 804 aa20.27■□□□□ 0.84
PTBP1-201ENST00000349038 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
PTBP1-201ENST00000349038 PDE4AP27815 886 aa20.27■□□□□ 0.84
PTBP1-201ENST00000349038 ARID3CA6NKF2 412 aa20.26■□□□□ 0.83
PTBP1-201ENST00000349038 CCDC7Q96M83 1385 aa20.25■□□□□ 0.83
PTBP1-201ENST00000349038 GSE1Q14687 1217 aa20.25■□□□□ 0.83
PTBP1-201ENST00000349038 EIF4G3O43432 1585 aaKnown RBP20.23■□□□□ 0.83
PTBP1-201ENST00000349038 ZBED9Q6R2W3 1325 aa20.23■□□□□ 0.83
PTBP1-201ENST00000349038 PLIN1O60240 522 aa20.21■□□□□ 0.83
PTBP1-201ENST00000349038 L3MBTL2Q969R5 705 aa20.21■□□□□ 0.83
PTBP1-201ENST00000349038 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
PTBP1-201ENST00000349038 ZNF608Q9ULD9 1512 aaPredicted RBP20.2■□□□□ 0.82
PTBP1-201ENST00000349038 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
PTBP1-201ENST00000349038 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-201ENST00000349038 NFKBIBQ15653 356 aa20.19■□□□□ 0.82
PTBP1-201ENST00000349038 PKNOX2Q96KN3 472 aa20.19■□□□□ 0.82
PTBP1-201ENST00000349038 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
PTBP1-201ENST00000349038 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
PTBP1-201ENST00000349038 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
PTBP1-201ENST00000349038 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
PTBP1-201ENST00000349038 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
PTBP1-201ENST00000349038 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
PTBP1-201ENST00000349038 RPRD2Q5VT52 1461 aaKnown RBP20.15■□□□□ 0.82
PTBP1-201ENST00000349038 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
PTBP1-201ENST00000349038 ANKRD30BQ9BXX2 1392 aa20.15■□□□□ 0.82
PTBP1-201ENST00000349038 POLR1AO95602 1720 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-201ENST00000349038 EPRSP07814 1512 aaKnown RBP20.13■□□□□ 0.81
PTBP1-201ENST00000349038 NBPF8Q3BBV2 869 aa20.13■□□□□ 0.81
PTBP1-201ENST00000349038 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
PTBP1-201ENST00000349038 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
PTBP1-201ENST00000349038 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
PTBP1-201ENST00000349038 RGS3P49796 1198 aa20.09■□□□□ 0.81
PTBP1-201ENST00000349038 CDK13Q14004 1512 aaKnown RBP20.07■□□□□ 0.8
PTBP1-201ENST00000349038 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
PTBP1-201ENST00000349038 NAP1L5Q96NT1 182 aaPredicted RBP20.07■□□□□ 0.8
PTBP1-201ENST00000349038 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
PTBP1-201ENST00000349038 PBRM1Q86U86 1689 aa20.06■□□□□ 0.8
PTBP1-201ENST00000349038 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
PTBP1-201ENST00000349038 DAPK1P53355 1430 aa20.05■□□□□ 0.8
PTBP1-201ENST00000349038 BACH2Q9BYV9 841 aa20.04■□□□□ 0.8
PTBP1-201ENST00000349038 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
PTBP1-201ENST00000349038 RNF123Q5XPI4 1314 aa20.03■□□□□ 0.8
PTBP1-201ENST00000349038 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
PTBP1-201ENST00000349038 DHX29Q7Z478 1369 aaKnown RBP20.03■□□□□ 0.8
PTBP1-201ENST00000349038 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
PTBP1-201ENST00000349038 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
PTBP1-201ENST00000349038 ABCC5O15440 1437 aa20.02■□□□□ 0.79
PTBP1-201ENST00000349038 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
PTBP1-201ENST00000349038 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
PTBP1-201ENST00000349038 WASHC2CQ9Y4E1 1318 aa19.99■□□□□ 0.79
PTBP1-201ENST00000349038 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
PTBP1-201ENST00000349038 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
PTBP1-201ENST00000349038 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
PTBP1-201ENST00000349038 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
PTBP1-201ENST00000349038 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
PTBP1-201ENST00000349038 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
PTBP1-201ENST00000349038 CHD1O14646 1710 aa19.98■□□□□ 0.79
PTBP1-201ENST00000349038 PZPP20742 1482 aa19.95■□□□□ 0.78
PTBP1-201ENST00000349038 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
PTBP1-201ENST00000349038 SLC4A1APQ9BWU0 796 aaKnown RBP19.95■□□□□ 0.78
PTBP1-201ENST00000349038 ZMYND15Q9H091 742 aa19.94■□□□□ 0.78
PTBP1-201ENST00000349038 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
PTBP1-201ENST00000349038 BCORL1Q5H9F3 1711 aa19.94■□□□□ 0.78
PTBP1-201ENST00000349038 GLIPR1L2Q4G1C9 344 aa19.93■□□□□ 0.78
PTBP1-201ENST00000349038 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
PTBP1-201ENST00000349038 CRBNQ96SW2 442 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms