RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 KIF16BQ96L93 1317 aa10.43□□□□□ -0.74
MCPH1-201ENST00000344683 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
MCPH1-201ENST00000344683 CCDC66A2RUB6 948 aa10.42□□□□□ -0.74
MCPH1-201ENST00000344683 MTUS2Q5JR59 1369 aa10.42□□□□□ -0.74
MCPH1-201ENST00000344683 ACBD3Q9H3P7 528 aa10.41□□□□□ -0.74
MCPH1-201ENST00000344683 NCBP3Q53F19 620 aaKnown RBP10.41□□□□□ -0.74
MCPH1-201ENST00000344683 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
MCPH1-201ENST00000344683 IPO8O15397 1037 aaKnown RBP10.41□□□□□ -0.74
MCPH1-201ENST00000344683 GSE1Q14687 1217 aa10.41□□□□□ -0.74
MCPH1-201ENST00000344683 TPM1P09493 284 aa10.41□□□□□ -0.74
MCPH1-201ENST00000344683 AK7Q96M32 723 aa10.41□□□□□ -0.74
MCPH1-201ENST00000344683 RDXP35241 583 aaKnown RBP10.41□□□□□ -0.74
MCPH1-201ENST00000344683 PMFBP1Q8TBY8 1022 aa10.41□□□□□ -0.74
MCPH1-201ENST00000344683 CDR1P51861 262 aa10.4□□□□□ -0.74
MCPH1-201ENST00000344683 A0A0G2JS52 829 aa10.4□□□□□ -0.74
MCPH1-201ENST00000344683 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
MCPH1-201ENST00000344683 RWDD1Q9H446 243 aaPredicted RBP10.39□□□□□ -0.75
MCPH1-201ENST00000344683 GOLGA6L19H0YKK7 550 aa10.39□□□□□ -0.75
MCPH1-201ENST00000344683 GPATCH3Q96I76 525 aa10.39□□□□□ -0.75
MCPH1-201ENST00000344683 PKNOX2Q96KN3 472 aa10.39□□□□□ -0.75
MCPH1-201ENST00000344683 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
MCPH1-201ENST00000344683 HSP90B1P14625 803 aaKnown RBP10.39□□□□□ -0.75
MCPH1-201ENST00000344683 CCDC191Q8NCU4 936 aa10.39□□□□□ -0.75
MCPH1-201ENST00000344683 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
MCPH1-201ENST00000344683 TPM2P07951 284 aa10.39□□□□□ -0.75
MCPH1-201ENST00000344683 SLKQ9H2G2 1235 aaPredicted RBP10.38□□□□□ -0.75
MCPH1-201ENST00000344683 ARGLU1Q9NWB6 273 aaPredicted RBP10.38□□□□□ -0.75
MCPH1-201ENST00000344683 ST18O60284 1047 aa10.38□□□□□ -0.75
MCPH1-201ENST00000344683 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
MCPH1-201ENST00000344683 CHIC2Q9UKJ5 165 aa10.37□□□□□ -0.75
MCPH1-201ENST00000344683 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
MCPH1-201ENST00000344683 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
MCPH1-201ENST00000344683 ATP6V1DQ9Y5K8 247 aa10.37□□□□□ -0.75
MCPH1-201ENST00000344683 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
MCPH1-201ENST00000344683 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
MCPH1-201ENST00000344683 NPHP1O15259 732 aa10.36□□□□□ -0.75
MCPH1-201ENST00000344683 RUFY1Q96T51 708 aa10.36□□□□□ -0.75
MCPH1-201ENST00000344683 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
MCPH1-201ENST00000344683 TAF3Q5VWG9 929 aa10.35□□□□□ -0.75
MCPH1-201ENST00000344683 CARD11Q9BXL7 1154 aa10.34□□□□□ -0.75
MCPH1-201ENST00000344683 CCAR2Q8N163 923 aaKnown RBP10.34□□□□□ -0.75
MCPH1-201ENST00000344683 TPD52L1Q16890 204 aaPredicted RBP10.34□□□□□ -0.75
MCPH1-201ENST00000344683 STK11IPQ8N1F8 1099 aa10.34□□□□□ -0.75
MCPH1-201ENST00000344683 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
MCPH1-201ENST00000344683 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
MCPH1-201ENST00000344683 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
MCPH1-201ENST00000344683 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
MCPH1-201ENST00000344683 CHMP4AQ9BY43 222 aa10.33□□□□□ -0.76
MCPH1-201ENST00000344683 CLIP1P30622 1438 aa10.32□□□□□ -0.76
MCPH1-201ENST00000344683 DIAPH3Q9NSV4 1193 aa10.32□□□□□ -0.76
MCPH1-201ENST00000344683 FAM43AQ8N2R8 423 aa10.32□□□□□ -0.76
MCPH1-201ENST00000344683 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
MCPH1-201ENST00000344683 RCAN3Q9UKA8 241 aa10.31□□□□□ -0.76
MCPH1-201ENST00000344683 TSHZ2Q9NRE2 1034 aa10.31□□□□□ -0.76
MCPH1-201ENST00000344683 IPO7O95373 1038 aaKnown RBP10.31□□□□□ -0.76
MCPH1-201ENST00000344683 ERCC4Q92889 916 aaPredicted RBP10.3□□□□□ -0.76
MCPH1-201ENST00000344683 BECN2A8MW95 431 aa10.3□□□□□ -0.76
MCPH1-201ENST00000344683 H0YHG0 523 aa10.3□□□□□ -0.76
MCPH1-201ENST00000344683 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
MCPH1-201ENST00000344683 RASSF8Q8NHQ8 419 aa10.3□□□□□ -0.76
MCPH1-201ENST00000344683 GOLGA3Q08378 1498 aa10.29□□□□□ -0.76
MCPH1-201ENST00000344683 TAF7LQ5H9L4 462 aa10.29□□□□□ -0.76
MCPH1-201ENST00000344683 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
MCPH1-201ENST00000344683 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
MCPH1-201ENST00000344683 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
MCPH1-201ENST00000344683 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
MCPH1-201ENST00000344683 ZRSR2Q15696 482 aaKnown RBP10.29□□□□□ -0.76
MCPH1-201ENST00000344683 CREBRFQ8IUR6 639 aa10.29□□□□□ -0.76
MCPH1-201ENST00000344683 ANKRD20A12PQ8NF67 263 aa10.29□□□□□ -0.76
MCPH1-201ENST00000344683 ZNF592Q92610 1267 aa10.29□□□□□ -0.76
MCPH1-201ENST00000344683 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
MCPH1-201ENST00000344683 TMF1P82094 1093 aa10.28□□□□□ -0.76
MCPH1-201ENST00000344683 MYO6Q9UM54 1294 aa10.28□□□□□ -0.76
MCPH1-201ENST00000344683 DDX49Q9Y6V7 483 aaKnown RBP10.28□□□□□ -0.76
MCPH1-201ENST00000344683 LEKR1Q6ZMV7 388 aa10.28□□□□□ -0.76
MCPH1-201ENST00000344683 CC2D1BQ5T0F9 858 aaKnown RBP10.27□□□□□ -0.76
MCPH1-201ENST00000344683 ISY1Q9ULR0 285 aaKnown RBP10.27□□□□□ -0.76
MCPH1-201ENST00000344683 FANCIQ9NVI1 1328 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
MCPH1-201ENST00000344683 HOMER1Q86YM7 354 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 USP8P40818 1118 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 H3BQV1 296 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 NEXNQ0ZGT2 675 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
MCPH1-201ENST00000344683 PES1O00541 588 aaKnown RBP10.26□□□□□ -0.77
MCPH1-201ENST00000344683 RTF1Q92541 710 aaKnown RBP10.26□□□□□ -0.77
MCPH1-201ENST00000344683 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
MCPH1-201ENST00000344683 INCENPQ9NQS7 918 aa10.25□□□□□ -0.77
MCPH1-201ENST00000344683 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
MCPH1-201ENST00000344683 CCDC39Q9UFE4 941 aa10.25□□□□□ -0.77
MCPH1-201ENST00000344683 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
MCPH1-201ENST00000344683 PDE4CQ08493 712 aa10.25□□□□□ -0.77
MCPH1-201ENST00000344683 RRP7BPQ9NSQ0 103 aa10.24□□□□□ -0.77
MCPH1-201ENST00000344683 MNS1Q8NEH6 495 aa10.24□□□□□ -0.77
MCPH1-201ENST00000344683 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.24□□□□□ -0.77
MCPH1-201ENST00000344683 NACADO15069 1562 aa10.24□□□□□ -0.77
MCPH1-201ENST00000344683 RALBP1Q15311 655 aa10.24□□□□□ -0.77
MCPH1-201ENST00000344683 CCP110O43303 1012 aa10.23□□□□□ -0.77
MCPH1-201ENST00000344683 GOLGA6L7A0A1B0GV03 622 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms