RNA–Protein interactions for RNA: ENST00000343820.9

TGIF1-202, Transcript of TGFB induced factor homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGIF1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-202ENST00000343820 DDX10Q13206 875 aaKnown RBP43.06■■■■■ 4.48
TGIF1-202ENST00000343820 SHROOM2Q13796 1616 aa43.03■■■■■ 4.48
TGIF1-202ENST00000343820 TROQ12816 1431 aaPredicted RBP43.01■■■■■ 4.48
TGIF1-202ENST00000343820 ABCC5O15440 1437 aa42.99■■■■■ 4.47
TGIF1-202ENST00000343820 CARMIL2Q6F5E8 1435 aa42.99■■■■■ 4.47
TGIF1-202ENST00000343820 TRIM52Q96A61 297 aa42.94■■■■■ 4.47
TGIF1-202ENST00000343820 PLB1Q6P1J6 1458 aa42.93■■■■■ 4.46
TGIF1-202ENST00000343820 OSCARQ8IYS5 282 aa42.93■■■■■ 4.46
TGIF1-202ENST00000343820 ADGBQ8N7X0 1667 aa42.91■■■■■ 4.46
TGIF1-202ENST00000343820 PRG4Q92954 1404 aaPredicted RBP42.9■■■■■ 4.46
TGIF1-202ENST00000343820 MPHOSPH9Q99550 1183 aa42.88■■■■■ 4.46
TGIF1-202ENST00000343820 HIRIP3Q9BW71 556 aaPredicted RBP42.86■■■■■ 4.45
TGIF1-202ENST00000343820 KIF14Q15058 1648 aa42.86■■■■■ 4.45
TGIF1-202ENST00000343820 CROCC2H7BZ55 1655 aa42.85■■■■■ 4.45
TGIF1-202ENST00000343820 CAMSAP2Q08AD1 1489 aa42.85■■■■■ 4.45
TGIF1-202ENST00000343820 ABCA8O94911 1581 aa42.81■■■■■ 4.44
TGIF1-202ENST00000343820 GPATCH8Q9UKJ3 1502 aaKnown RBP42.8■■■■■ 4.44
TGIF1-202ENST00000343820 KCNH8Q96L42 1107 aa42.8■■■■■ 4.44
TGIF1-202ENST00000343820 ZNF644Q9H582 1327 aaPredicted RBP42.8■■■■■ 4.44
TGIF1-202ENST00000343820 ERCC6L2Q5T890 1561 aa42.76■■■■■ 4.44
TGIF1-202ENST00000343820 CCER2I3L3R5 266 aa42.76■■■■■ 4.44
TGIF1-202ENST00000343820 ANP32CO43423 234 aa42.71■■■■■ 4.43
TGIF1-202ENST00000343820 ADGRL2O95490 1459 aa42.71■■■■■ 4.43
TGIF1-202ENST00000343820 CDC42BPAQ5VT25 1732 aa42.7■■■■■ 4.43
TGIF1-202ENST00000343820 ANKRD30BQ9BXX2 1392 aa42.69■■■■■ 4.42
TGIF1-202ENST00000343820 CFDP1Q9UEE9 299 aaPredicted RBP42.69■■■■■ 4.42
TGIF1-202ENST00000343820 RPRD2Q5VT52 1461 aaKnown RBP42.69■■■■■ 4.42
TGIF1-202ENST00000343820 NCOA1Q15788 1441 aa42.63■■■■■ 4.41
TGIF1-202ENST00000343820 ABCC10Q5T3U5 1492 aa42.58■■■■■ 4.41
TGIF1-202ENST00000343820 TEX14Q8IWB6 1497 aa42.58■■■■■ 4.41
TGIF1-202ENST00000343820 ATP10BO94823 1461 aa42.57■■■■■ 4.41
TGIF1-202ENST00000343820 PZPP20742 1482 aa42.57■■■■■ 4.4
TGIF1-202ENST00000343820 L3MBTL2Q969R5 705 aa42.56■■■■■ 4.4
TGIF1-202ENST00000343820 PTPRGP23470 1445 aa42.55■■■■■ 4.4
TGIF1-202ENST00000343820 FOXD1Q16676 465 aa42.54■■■■■ 4.4
TGIF1-202ENST00000343820 SUPT16HQ9Y5B9 1047 aaKnown RBP42.53■■■■■ 4.4
TGIF1-202ENST00000343820 HSPA5P11021 654 aaKnown RBP42.52■■■■■ 4.4
TGIF1-202ENST00000343820 SLC4A1APQ9BWU0 796 aaKnown RBP42.51■■■■■ 4.4
TGIF1-202ENST00000343820 SHANK2Q9UPX8 1470 aa42.51■■■■■ 4.4
TGIF1-202ENST00000343820 PLEKHD1A6NEE1 506 aa42.5■■■■■ 4.39
TGIF1-202ENST00000343820 EIF4G2P78344 907 aaKnown RBP eCLIP42.5■■■■■ 4.39
TGIF1-202ENST00000343820 ANKRD30AQ9BXX3 1397 aa42.48■■■■■ 4.39
TGIF1-202ENST00000343820 POLR1AO95602 1720 aaPredicted RBP42.44■■■■■ 4.38
TGIF1-202ENST00000343820 ZNF777Q9ULD5 760 aaPredicted RBP42.43■■■■■ 4.38
TGIF1-202ENST00000343820 WASHC2AQ641Q2 1341 aa42.42■■■■■ 4.38
TGIF1-202ENST00000343820 KIAA1107Q9UPP5 1409 aa42.38■■■■■ 4.37
TGIF1-202ENST00000343820 ARHGEF5Q12774 1597 aa42.36■■■■■ 4.37
TGIF1-202ENST00000343820 ANKRD50Q9ULJ7 1429 aa42.34■■■■■ 4.37
TGIF1-202ENST00000343820 C9orf84Q5VXU9 1444 aa42.32■■■■■ 4.37
TGIF1-202ENST00000343820 CNTLNQ9NXG0 1405 aa42.29■■■■■ 4.36
TGIF1-202ENST00000343820 PREX2Q70Z35 1606 aa42.29■■■■■ 4.36
TGIF1-202ENST00000343820 NBPF8Q3BBV2 869 aa42.29■■■■■ 4.36
TGIF1-202ENST00000343820 MBD5Q9P267 1494 aa42.28■■■■■ 4.36
TGIF1-202ENST00000343820 KDM5DQ9BY66 1539 aa42.27■■■■■ 4.36
TGIF1-202ENST00000343820 CDC42BPBQ9Y5S2 1711 aa42.27■■■■■ 4.36
TGIF1-202ENST00000343820 SPATA31E1Q6ZUB1 1445 aa42.23■■■■■ 4.35
TGIF1-202ENST00000343820 ABCC2Q92887 1545 aa42.23■■■■■ 4.35
TGIF1-202ENST00000343820 CCDC7Q96M83 1385 aa42.23■■■■■ 4.35
TGIF1-202ENST00000343820 SAMD9LQ8IVG5 1584 aa42.18■■■■■ 4.34
TGIF1-202ENST00000343820 RIMBP3CA6NJZ7 1639 aa42.18■■■■■ 4.34
TGIF1-202ENST00000343820 RIMBP3BA6NNM3 1639 aa42.18■■■■■ 4.34
TGIF1-202ENST00000343820 RIMBP3Q9UFD9 1639 aa42.18■■■■■ 4.34
TGIF1-202ENST00000343820 PKD2Q13563 968 aa42.15■■■■■ 4.34
TGIF1-202ENST00000343820 UHRF1BP1LA0JNW5 1464 aa42.14■■■■■ 4.34
TGIF1-202ENST00000343820 TSPY4P0CV99 314 aa42.13■■■■■ 4.34
TGIF1-202ENST00000343820 TSPY10P0CW01 314 aa42.13■■■■■ 4.34
TGIF1-202ENST00000343820 CCDC141Q6ZP82 1450 aa42.11■■■■■ 4.33
TGIF1-202ENST00000343820 C11orf95C9JLR9 678 aaPredicted RBP42.08■■■■■ 4.33
TGIF1-202ENST00000343820 NUP155O75694 1391 aa42.07■■■■■ 4.32
TGIF1-202ENST00000343820 KIF15Q9NS87 1388 aa42.07■■■■■ 4.32
TGIF1-202ENST00000343820 ARHGEF12Q9NZN5 1544 aa42.03■■■■■ 4.32
TGIF1-202ENST00000343820 MAST1Q9Y2H9 1570 aa42.02■■■■■ 4.32
TGIF1-202ENST00000343820 RSPH4AQ5TD94 716 aa42.02■■■■■ 4.32
TGIF1-202ENST00000343820 TTC37Q6PGP7 1564 aa42.01■■■■■ 4.32
TGIF1-202ENST00000343820 HNRNPMP52272 730 aaKnown RBP eCLIP42■■■■■ 4.313e-7■□□□□ 10.2
TGIF1-202ENST00000343820 UHRF1BP1Q6BDS2 1440 aa42■■■■■ 4.31
TGIF1-202ENST00000343820 ZCCHC11Q5TAX3 1644 aaKnown RBP42■■■■■ 4.31
TGIF1-202ENST00000343820 MYO5CQ9NQX4 1742 aa42■■■■■ 4.31
TGIF1-202ENST00000343820 KDM5CP41229 1560 aa41.98■■■■■ 4.31
TGIF1-202ENST00000343820 KIF7Q2M1P5 1343 aa41.97■■■■■ 4.31
TGIF1-202ENST00000343820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.96■■■■■ 4.319e-7■■■■□ 21.5
TGIF1-202ENST00000343820 RALGAPBQ86X10 1494 aa41.92■■■■■ 4.3
TGIF1-202ENST00000343820 SYCP2Q9BX26 1530 aa41.92■■■■■ 4.3
TGIF1-202ENST00000343820 BCORL1Q5H9F3 1711 aa41.91■■■■■ 4.3
TGIF1-202ENST00000343820 FKBP8Q14318 412 aa41.91■■■■■ 4.3
TGIF1-202ENST00000343820 ARHGAP5Q13017 1502 aa41.91■■■■■ 4.3
TGIF1-202ENST00000343820 PRKRIP1Q9H875 184 aaPredicted RBP41.91■■■■■ 4.3
TGIF1-202ENST00000343820 NEFLP07196 543 aa41.89■■■■■ 4.3
TGIF1-202ENST00000343820 USP47Q96K76 1375 aa41.89■■■■■ 4.3
TGIF1-202ENST00000343820 UNC13BO14795 1591 aa41.88■■■■■ 4.29
TGIF1-202ENST00000343820 FAM135AQ9P2D6 1515 aa41.87■■■■■ 4.29
TGIF1-202ENST00000343820 PLXNC1O60486 1568 aa41.86■■■■■ 4.29
TGIF1-202ENST00000343820 PLEKHH2Q8IVE3 1493 aa41.85■■■■■ 4.29
TGIF1-202ENST00000343820 CYB5RLQ6IPT4 315 aa41.84■■■■■ 4.29
TGIF1-202ENST00000343820 HNRNPUQ00839 825 aaKnown RBP eCLIP41.84■■■■■ 4.29
TGIF1-202ENST00000343820 ARID4BQ4LE39 1312 aaPredicted RBP41.81■■■■■ 4.28
TGIF1-202ENST00000343820 ZNF326Q5BKZ1 582 aaKnown RBP41.75■■■■■ 4.27
TGIF1-202ENST00000343820 IQGAP3Q86VI3 1631 aa41.72■■■■■ 4.27
TGIF1-202ENST00000343820 CCDC184Q52MB2 194 aa41.7■■■■■ 4.27
TGIF1-202ENST00000343820 BCANQ96GW7 911 aa41.68■■■■■ 4.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms