RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CFTRP13569 1480 aa19.83■□□□□ 0.77
CLCN1-201ENST00000343257 PLIN1O60240 522 aa19.83■□□□□ 0.77
CLCN1-201ENST00000343257 DENND4BO75064 1496 aaPredicted RBP19.83■□□□□ 0.76
CLCN1-201ENST00000343257 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.76
CLCN1-201ENST00000343257 BACH2Q9BYV9 841 aa19.82■□□□□ 0.76
CLCN1-201ENST00000343257 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
CLCN1-201ENST00000343257 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
CLCN1-201ENST00000343257 PPM1GO15355 546 aaPredicted RBP19.81■□□□□ 0.76
CLCN1-201ENST00000343257 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
CLCN1-201ENST00000343257 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
CLCN1-201ENST00000343257 RCAN3Q9UKA8 241 aa19.78■□□□□ 0.76
CLCN1-201ENST00000343257 GSE1Q14687 1217 aa19.77■□□□□ 0.76
CLCN1-201ENST00000343257 USP35Q9P2H5 1018 aa19.77■□□□□ 0.76
CLCN1-201ENST00000343257 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
CLCN1-201ENST00000343257 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.76
CLCN1-201ENST00000343257 KDM6BO15054 1643 aa19.77■□□□□ 0.76
CLCN1-201ENST00000343257 NFKBIBQ15653 356 aa19.76■□□□□ 0.75
CLCN1-201ENST00000343257 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
CLCN1-201ENST00000343257 WASHC2CQ9Y4E1 1318 aa19.75■□□□□ 0.75
CLCN1-201ENST00000343257 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
CLCN1-201ENST00000343257 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
CLCN1-201ENST00000343257 CDCA7LQ96GN5 454 aa19.74■□□□□ 0.75
CLCN1-201ENST00000343257 SPATA31E1Q6ZUB1 1445 aa19.68■□□□□ 0.74
CLCN1-201ENST00000343257 UBE2Q2Q8WVN8 375 aa19.68■□□□□ 0.74
CLCN1-201ENST00000343257 CRBNQ96SW2 442 aa19.67■□□□□ 0.74
CLCN1-201ENST00000343257 USP47Q96K76 1375 aa19.67■□□□□ 0.74
CLCN1-201ENST00000343257 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
CLCN1-201ENST00000343257 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
CLCN1-201ENST00000343257 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
CLCN1-201ENST00000343257 ZNF644Q9H582 1327 aaPredicted RBP19.64■□□□□ 0.73
CLCN1-201ENST00000343257 DDRGK1Q96HY6 314 aa19.64■□□□□ 0.73
CLCN1-201ENST00000343257 FRAT2O75474 233 aaPredicted RBP19.63■□□□□ 0.73
CLCN1-201ENST00000343257 MS4A1P11836 297 aa19.63■□□□□ 0.73
CLCN1-201ENST00000343257 EFCAB5A4FU69 1503 aa19.62■□□□□ 0.73
CLCN1-201ENST00000343257 ARXQ96QS3 562 aa19.61■□□□□ 0.73
CLCN1-201ENST00000343257 C20orf194Q5TEA3 1177 aa19.6■□□□□ 0.73
CLCN1-201ENST00000343257 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
CLCN1-201ENST00000343257 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
CLCN1-201ENST00000343257 CARD11Q9BXL7 1154 aa19.6■□□□□ 0.73
CLCN1-201ENST00000343257 TEX14Q8IWB6 1497 aa19.59■□□□□ 0.73
CLCN1-201ENST00000343257 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
CLCN1-201ENST00000343257 RGS3P49796 1198 aa19.58■□□□□ 0.73
CLCN1-201ENST00000343257 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.72
CLCN1-201ENST00000343257 MAGI3Q5TCQ9 1506 aa19.57■□□□□ 0.72
CLCN1-201ENST00000343257 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
CLCN1-201ENST00000343257 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
CLCN1-201ENST00000343257 DCAF11Q8TEB1 546 aa19.56■□□□□ 0.72
CLCN1-201ENST00000343257 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
CLCN1-201ENST00000343257 MYBBP1AQ9BQG0 1328 aaKnown RBP19.55■□□□□ 0.72
CLCN1-201ENST00000343257 LRRIQ1Q96JM4 1722 aa19.55■□□□□ 0.72
CLCN1-201ENST00000343257 CC2D1BQ5T0F9 858 aaKnown RBP19.54■□□□□ 0.72
CLCN1-201ENST00000343257 BCORL1Q5H9F3 1711 aa19.53■□□□□ 0.72
CLCN1-201ENST00000343257 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
CLCN1-201ENST00000343257 PKD2Q13563 968 aa19.53■□□□□ 0.72
CLCN1-201ENST00000343257 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
CLCN1-201ENST00000343257 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
CLCN1-201ENST00000343257 KIF15Q9NS87 1388 aa19.52■□□□□ 0.72
CLCN1-201ENST00000343257 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
CLCN1-201ENST00000343257 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
CLCN1-201ENST00000343257 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
CLCN1-201ENST00000343257 RALBP1Q15311 655 aa19.47■□□□□ 0.71
CLCN1-201ENST00000343257 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
CLCN1-201ENST00000343257 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
CLCN1-201ENST00000343257 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
CLCN1-201ENST00000343257 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
CLCN1-201ENST00000343257 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
CLCN1-201ENST00000343257 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
CLCN1-201ENST00000343257 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
CLCN1-201ENST00000343257 POGKQ9P215 609 aa19.44■□□□□ 0.7
CLCN1-201ENST00000343257 TCOF1Q13428 1488 aaKnown RBP19.44■□□□□ 0.7
CLCN1-201ENST00000343257 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
CLCN1-201ENST00000343257 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
CLCN1-201ENST00000343257 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
CLCN1-201ENST00000343257 C8orf34Q49A92 452 aa19.43■□□□□ 0.7
CLCN1-201ENST00000343257 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
CLCN1-201ENST00000343257 DAPK1P53355 1430 aa19.41■□□□□ 0.7
CLCN1-201ENST00000343257 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
CLCN1-201ENST00000343257 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
CLCN1-201ENST00000343257 ABCC5O15440 1437 aa19.4■□□□□ 0.7
CLCN1-201ENST00000343257 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.7
CLCN1-201ENST00000343257 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
CLCN1-201ENST00000343257 KTN1Q86UP2 1357 aaKnown RBP19.39■□□□□ 0.69
CLCN1-201ENST00000343257 RRAGDQ9NQL2 400 aaPredicted RBP19.38■□□□□ 0.69
CLCN1-201ENST00000343257 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
CLCN1-201ENST00000343257 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
CLCN1-201ENST00000343257 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
CLCN1-201ENST00000343257 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
CLCN1-201ENST00000343257 POLR1AO95602 1720 aaPredicted RBP19.36■□□□□ 0.69
CLCN1-201ENST00000343257 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
CLCN1-201ENST00000343257 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
CLCN1-201ENST00000343257 EPRSP07814 1512 aaKnown RBP19.34■□□□□ 0.69
CLCN1-201ENST00000343257 SPRYD3Q8NCJ5 442 aa19.34■□□□□ 0.69
CLCN1-201ENST00000343257 PZPP20742 1482 aa19.33■□□□□ 0.69
CLCN1-201ENST00000343257 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
CLCN1-201ENST00000343257 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
CLCN1-201ENST00000343257 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
CLCN1-201ENST00000343257 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
CLCN1-201ENST00000343257 KDM5CP41229 1560 aa19.31■□□□□ 0.68
CLCN1-201ENST00000343257 NESP48681 1621 aa19.31■□□□□ 0.68
CLCN1-201ENST00000343257 NAP1L5Q96NT1 182 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms