RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 WDR97A6NE52 1622 aa21.64■■□□□ 1.06
RDX-201ENST00000343115 NCOA2Q15596 1464 aa21.63■■□□□ 1.05
RDX-201ENST00000343115 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
RDX-201ENST00000343115 TIAM1Q13009 1591 aa21.62■■□□□ 1.05
RDX-201ENST00000343115 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
RDX-201ENST00000343115 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
RDX-201ENST00000343115 NEFMP07197 916 aa21.59■■□□□ 1.05
RDX-201ENST00000343115 CARMIL2Q6F5E8 1435 aa21.59■■□□□ 1.05
RDX-201ENST00000343115 ROCK2O75116 1388 aaKnown RBP21.58■■□□□ 1.05
RDX-201ENST00000343115 RGS3P49796 1198 aa21.57■■□□□ 1.04
RDX-201ENST00000343115 CCDC184Q52MB2 194 aa21.57■■□□□ 1.04
RDX-201ENST00000343115 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
RDX-201ENST00000343115 TMF1P82094 1093 aa21.57■■□□□ 1.04
RDX-201ENST00000343115 SLC24A1O60721 1099 aa21.56■■□□□ 1.04
RDX-201ENST00000343115 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
RDX-201ENST00000343115 KIF7Q2M1P5 1343 aa21.54■■□□□ 1.04
RDX-201ENST00000343115 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
RDX-201ENST00000343115 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
RDX-201ENST00000343115 NBPF8Q3BBV2 869 aa21.53■■□□□ 1.04
RDX-201ENST00000343115 ARXQ96QS3 562 aa21.52■■□□□ 1.04
RDX-201ENST00000343115 RCAN3Q9UKA8 241 aa21.51■■□□□ 1.03
RDX-201ENST00000343115 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
RDX-201ENST00000343115 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
RDX-201ENST00000343115 USP47Q96K76 1375 aa21.51■■□□□ 1.03
RDX-201ENST00000343115 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
RDX-201ENST00000343115 CDCA8Q53HL2 280 aa21.49■■□□□ 1.03
RDX-201ENST00000343115 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
RDX-201ENST00000343115 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
RDX-201ENST00000343115 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
RDX-201ENST00000343115 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
RDX-201ENST00000343115 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
RDX-201ENST00000343115 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
RDX-201ENST00000343115 RALBP1Q15311 655 aa21.45■■□□□ 1.02
RDX-201ENST00000343115 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
RDX-201ENST00000343115 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
RDX-201ENST00000343115 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
RDX-201ENST00000343115 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
RDX-201ENST00000343115 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
RDX-201ENST00000343115 NAIPQ13075 1403 aa21.42■■□□□ 1.02
RDX-201ENST00000343115 PLIN1O60240 522 aa21.41■■□□□ 1.02
RDX-201ENST00000343115 PPM1GO15355 546 aaPredicted RBP21.41■■□□□ 1.02
RDX-201ENST00000343115 PTPRGP23470 1445 aa21.41■■□□□ 1.02
RDX-201ENST00000343115 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
RDX-201ENST00000343115 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
RDX-201ENST00000343115 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
RDX-201ENST00000343115 PANK3Q9H999 370 aa21.39■■□□□ 1.01
RDX-201ENST00000343115 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
RDX-201ENST00000343115 GGT6Q6P531 493 aa21.37■■□□□ 1.01
RDX-201ENST00000343115 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
RDX-201ENST00000343115 EFCAB2Q5VUJ9 269 aa21.37■■□□□ 1.01
RDX-201ENST00000343115 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
RDX-201ENST00000343115 DEKP35659 375 aaKnown RBP21.37■■□□□ 1.01
RDX-201ENST00000343115 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
RDX-201ENST00000343115 CCDC146Q8IYE0 955 aa21.36■■□□□ 1.01
RDX-201ENST00000343115 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
RDX-201ENST00000343115 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
RDX-201ENST00000343115 HSP90AA1P07900 732 aaKnown RBP21.34■■□□□ 1.01
RDX-201ENST00000343115 KIF3BO15066 747 aa21.34■■□□□ 1.01
RDX-201ENST00000343115 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
RDX-201ENST00000343115 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
RDX-201ENST00000343115 RTN4Q9NQC3 1192 aaKnown RBP21.33■■□□□ 1.01
RDX-201ENST00000343115 PRDM2Q13029 1718 aa21.32■■□□□ 1
RDX-201ENST00000343115 KIF15Q9NS87 1388 aa21.32■■□□□ 1
RDX-201ENST00000343115 EIF5BO60841 1220 aaKnown RBP21.32■■□□□ 1
RDX-201ENST00000343115 CFAP53Q96M91 514 aa21.31■■□□□ 1
RDX-201ENST00000343115 DDRGK1Q96HY6 314 aa21.31■■□□□ 1
RDX-201ENST00000343115 U2SURPO15042 1029 aaKnown RBP21.31■■□□□ 1
RDX-201ENST00000343115 CCDC144AA2RUR9 1427 aa21.3■■□□□ 1
RDX-201ENST00000343115 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
RDX-201ENST00000343115 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
RDX-201ENST00000343115 MAPKBP1O60336 1514 aa21.3■■□□□ 1
RDX-201ENST00000343115 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
RDX-201ENST00000343115 ANKRD50Q9ULJ7 1429 aa21.29■■□□□ 1
RDX-201ENST00000343115 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
RDX-201ENST00000343115 MORC1Q86VD1 984 aa21.27■■□□□ 1
RDX-201ENST00000343115 PTPRKQ15262 1439 aa21.27■□□□□ 0.99
RDX-201ENST00000343115 STK26Q9P289 416 aa21.26■□□□□ 0.99
RDX-201ENST00000343115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.26■□□□□ 0.99
RDX-201ENST00000343115 NBPF1Q3BBV0 1214 aa21.25■□□□□ 0.99
RDX-201ENST00000343115 SPAG9O60271 1321 aaKnown RBP21.25■□□□□ 0.99
RDX-201ENST00000343115 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
RDX-201ENST00000343115 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
RDX-201ENST00000343115 RSPH4AQ5TD94 716 aa21.24■□□□□ 0.99
RDX-201ENST00000343115 RRP1P56182 461 aaKnown RBP21.23■□□□□ 0.99
RDX-201ENST00000343115 MLECQ14165 292 aa21.23■□□□□ 0.99
RDX-201ENST00000343115 IPO9Q96P70 1041 aaKnown RBP21.23■□□□□ 0.99
RDX-201ENST00000343115 KANK1Q14678 1352 aa21.23■□□□□ 0.99
RDX-201ENST00000343115 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
RDX-201ENST00000343115 POGKQ9P215 609 aa21.22■□□□□ 0.99
RDX-201ENST00000343115 EHBP1L1Q8N3D4 1523 aa21.22■□□□□ 0.99
RDX-201ENST00000343115 MAP3K1Q13233 1512 aa21.21■□□□□ 0.99
RDX-201ENST00000343115 CDCA7LQ96GN5 454 aa21.21■□□□□ 0.99
RDX-201ENST00000343115 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
RDX-201ENST00000343115 AKNAQ7Z591 1439 aa21.2■□□□□ 0.98
RDX-201ENST00000343115 PLEKHG5O94827 1062 aa21.19■□□□□ 0.98
RDX-201ENST00000343115 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
RDX-201ENST00000343115 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
RDX-201ENST00000343115 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
RDX-201ENST00000343115 CRBNQ96SW2 442 aa21.18■□□□□ 0.98
RDX-201ENST00000343115 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms