RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
PERM1-201ENST00000341290 ATP10BO94823 1461 aa21.44■■□□□ 1.02
PERM1-201ENST00000341290 PRKCSHP14314 528 aaPredicted RBP21.43■■□□□ 1.02
PERM1-201ENST00000341290 TIMELESSQ9UNS1 1208 aa21.42■■□□□ 1.02
PERM1-201ENST00000341290 PTPRKQ15262 1439 aa21.42■■□□□ 1.02
PERM1-201ENST00000341290 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
PERM1-201ENST00000341290 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
PERM1-201ENST00000341290 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
PERM1-201ENST00000341290 FGD6Q6ZV73 1430 aa21.41■■□□□ 1.02
PERM1-201ENST00000341290 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
PERM1-201ENST00000341290 MAGI3Q5TCQ9 1506 aa21.39■■□□□ 1.01
PERM1-201ENST00000341290 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
PERM1-201ENST00000341290 IRX6P78412 446 aaPredicted RBP21.38■■□□□ 1.01
PERM1-201ENST00000341290 CDK13Q14004 1512 aaKnown RBP21.38■■□□□ 1.01
PERM1-201ENST00000341290 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
PERM1-201ENST00000341290 SUPT6HQ7KZ85 1726 aaKnown RBP21.34■■□□□ 1.01
PERM1-201ENST00000341290 HNRNPUQ00839 825 aaKnown RBP eCLIP21.33■■□□□ 1
PERM1-201ENST00000341290 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
PERM1-201ENST00000341290 GLI2P10070 1586 aa21.31■■□□□ 1
PERM1-201ENST00000341290 TROQ12816 1431 aaPredicted RBP21.3■■□□□ 1
PERM1-201ENST00000341290 ABCA9Q8IUA7 1624 aa21.28■■□□□ 1
PERM1-201ENST00000341290 KIF14Q15058 1648 aa21.28■■□□□ 1
PERM1-201ENST00000341290 HFM1A2PYH4 1435 aa21.28■■□□□ 1
PERM1-201ENST00000341290 FOXD1Q16676 465 aa21.27■■□□□ 1
PERM1-201ENST00000341290 NAIPQ13075 1403 aa21.27■□□□□ 0.99
PERM1-201ENST00000341290 WDR7Q9Y4E6 1490 aa21.26■□□□□ 0.99
PERM1-201ENST00000341290 NCOA2Q15596 1464 aa21.26■□□□□ 0.99
PERM1-201ENST00000341290 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
PERM1-201ENST00000341290 ARAP3Q8WWN8 1544 aa21.25■□□□□ 0.99
PERM1-201ENST00000341290 HSPA5P11021 654 aaKnown RBP21.24■□□□□ 0.99
PERM1-201ENST00000341290 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
PERM1-201ENST00000341290 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
PERM1-201ENST00000341290 MYOM3Q5VTT5 1437 aa21.23■□□□□ 0.99
PERM1-201ENST00000341290 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
PERM1-201ENST00000341290 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
PERM1-201ENST00000341290 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
PERM1-201ENST00000341290 PREX2Q70Z35 1606 aa21.2■□□□□ 0.99
PERM1-201ENST00000341290 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.98
PERM1-201ENST00000341290 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
PERM1-201ENST00000341290 ASXL2Q76L83 1435 aa21.2■□□□□ 0.98
PERM1-201ENST00000341290 MYO5CQ9NQX4 1742 aa21.2■□□□□ 0.98
PERM1-201ENST00000341290 DIP2BQ9P265 1576 aa21.2■□□□□ 0.98
PERM1-201ENST00000341290 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
PERM1-201ENST00000341290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
PERM1-201ENST00000341290 TTC37Q6PGP7 1564 aa21.16■□□□□ 0.98
PERM1-201ENST00000341290 CDC42BPBQ9Y5S2 1711 aa21.16■□□□□ 0.98
PERM1-201ENST00000341290 CDK11AQ9UQ88 783 aaPredicted RBP21.15■□□□□ 0.98
PERM1-201ENST00000341290 FAM9BQ8IZU0 186 aa21.14■□□□□ 0.97
PERM1-201ENST00000341290 C11orf95C9JLR9 678 aaPredicted RBP21.13■□□□□ 0.97
PERM1-201ENST00000341290 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
PERM1-201ENST00000341290 L3MBTL2Q969R5 705 aa21.12■□□□□ 0.97
PERM1-201ENST00000341290 EIF4G2P78344 907 aaKnown RBP eCLIP21.12■□□□□ 0.97
PERM1-201ENST00000341290 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
PERM1-201ENST00000341290 PPRC1Q5VV67 1664 aaKnown RBP21.1■□□□□ 0.97
PERM1-201ENST00000341290 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
PERM1-201ENST00000341290 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
PERM1-201ENST00000341290 MIA2Q96PC5 1412 aa21.08■□□□□ 0.97
PERM1-201ENST00000341290 PLEKHD1A6NEE1 506 aa21.08■□□□□ 0.96
PERM1-201ENST00000341290 KDM6BO15054 1643 aa21.07■□□□□ 0.96
PERM1-201ENST00000341290 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
PERM1-201ENST00000341290 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
PERM1-201ENST00000341290 MSH5O43196 834 aa21.06■□□□□ 0.96
PERM1-201ENST00000341290 SENP3-EIF4A1A0A087X0R7 540 aa21.06■□□□□ 0.96
PERM1-201ENST00000341290 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
PERM1-201ENST00000341290 NPM1P06748 294 aaKnown RBP eCLIP21.04■□□□□ 0.96
PERM1-201ENST00000341290 MRS2Q9HD23 443 aa21.03■□□□□ 0.96
PERM1-201ENST00000341290 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
PERM1-201ENST00000341290 PLCH2O75038 1416 aa21.02■□□□□ 0.96
PERM1-201ENST00000341290 NBPF8Q3BBV2 869 aa21.02■□□□□ 0.95
PERM1-201ENST00000341290 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
PERM1-201ENST00000341290 ZNF644Q9H582 1327 aaPredicted RBP21.01■□□□□ 0.95
PERM1-201ENST00000341290 CROCC2H7BZ55 1655 aa21.01■□□□□ 0.95
PERM1-201ENST00000341290 ARHGEF5Q12774 1597 aa20.99■□□□□ 0.95
PERM1-201ENST00000341290 SAMD9LQ8IVG5 1584 aa20.99■□□□□ 0.95
PERM1-201ENST00000341290 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
PERM1-201ENST00000341290 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
PERM1-201ENST00000341290 B4GALNT3Q6L9W6 998 aa20.97■□□□□ 0.95
PERM1-201ENST00000341290 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
PERM1-201ENST00000341290 ABCC1P33527 1531 aa20.95■□□□□ 0.94
PERM1-201ENST00000341290 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
PERM1-201ENST00000341290 NEO1Q92859 1461 aa20.95■□□□□ 0.94
PERM1-201ENST00000341290 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
PERM1-201ENST00000341290 DNMT1P26358 1616 aaKnown RBP20.94■□□□□ 0.94
PERM1-201ENST00000341290 PLEKHH2Q8IVE3 1493 aa20.93■□□□□ 0.94
PERM1-201ENST00000341290 MAST1Q9Y2H9 1570 aa20.93■□□□□ 0.94
PERM1-201ENST00000341290 KIAA1107Q9UPP5 1409 aa20.92■□□□□ 0.94
PERM1-201ENST00000341290 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
PERM1-201ENST00000341290 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
PERM1-201ENST00000341290 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
PERM1-201ENST00000341290 PPP4R2Q9NY27 417 aa20.88■□□□□ 0.93
PERM1-201ENST00000341290 ADGBQ8N7X0 1667 aa20.88■□□□□ 0.93
PERM1-201ENST00000341290 CD109Q6YHK3 1445 aa20.88■□□□□ 0.93
PERM1-201ENST00000341290 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
PERM1-201ENST00000341290 ARHGAP5Q13017 1502 aa20.88■□□□□ 0.93
PERM1-201ENST00000341290 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
PERM1-201ENST00000341290 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
PERM1-201ENST00000341290 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
PERM1-201ENST00000341290 RICTORQ6R327 1708 aa20.86■□□□□ 0.93
PERM1-201ENST00000341290 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
PERM1-201ENST00000341290 MBD5Q9P267 1494 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms